data_2KDS # _entry.id 2KDS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KDS RCSB RCSB100995 WWPDB D_1000100995 # _pdbx_database_status.recvd_initial_deposition_date 2009-01-15 _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KDS _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Edmondson, S.P.' 1 'Shriver, J.W.' 2 # _citation.id primary _citation.title 'Structure and Stability of the Archael L14e Ribosomal Protein from Sulfolobus solfataricus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Edmondson, S.P.' 1 primary 'Clark, A.T.' 2 primary 'Turri, J.S.' 3 primary 'Smith, K.L.' 4 primary 'Shriver, J.W.' 5 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description '50S ribosomal protein L14e' _entity.formula_weight 10750.688 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PAIEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDIQKGASDEEVKKKLEESNL TEYMKEKIKIRMPTL ; _entity_poly.pdbx_seq_one_letter_code_can ;PAIEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDIQKGASDEEVKKKLEESNL TEYMKEKIKIRMPTL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ALA n 1 3 ILE n 1 4 GLU n 1 5 VAL n 1 6 GLY n 1 7 ARG n 1 8 ILE n 1 9 CYS n 1 10 VAL n 1 11 LYS n 1 12 VAL n 1 13 LYS n 1 14 GLY n 1 15 ARG n 1 16 GLU n 1 17 ALA n 1 18 GLY n 1 19 SER n 1 20 LYS n 1 21 CYS n 1 22 VAL n 1 23 ILE n 1 24 VAL n 1 25 ASP n 1 26 ILE n 1 27 ILE n 1 28 ASP n 1 29 ASP n 1 30 ASN n 1 31 PHE n 1 32 VAL n 1 33 LEU n 1 34 VAL n 1 35 THR n 1 36 GLY n 1 37 PRO n 1 38 LYS n 1 39 ASP n 1 40 ILE n 1 41 THR n 1 42 GLY n 1 43 VAL n 1 44 LYS n 1 45 ARG n 1 46 ARG n 1 47 ARG n 1 48 VAL n 1 49 ASN n 1 50 ILE n 1 51 LEU n 1 52 HIS n 1 53 LEU n 1 54 GLU n 1 55 PRO n 1 56 THR n 1 57 ASP n 1 58 LYS n 1 59 LYS n 1 60 ILE n 1 61 ASP n 1 62 ILE n 1 63 GLN n 1 64 LYS n 1 65 GLY n 1 66 ALA n 1 67 SER n 1 68 ASP n 1 69 GLU n 1 70 GLU n 1 71 VAL n 1 72 LYS n 1 73 LYS n 1 74 LYS n 1 75 LEU n 1 76 GLU n 1 77 GLU n 1 78 SER n 1 79 ASN n 1 80 LEU n 1 81 THR n 1 82 GLU n 1 83 TYR n 1 84 MET n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 MET n 1 93 PRO n 1 94 THR n 1 95 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rpl14e, SSO5763' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain P2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'RosettaBlue(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETBlue-2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RL14E_SULSO _struct_ref.pdbx_db_accession Q980C1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPAIEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDIQKGASDEEVKKKLEESN LTEYMKEKIKIRMPTL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2KDS A 1 ? 95 ? Q980C1 2 ? 96 ? 2 96 2 1 2KDS A 1 ? 95 ? Q980C1 2 ? 96 ? 2 96 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 3 '2D 1H-15N HSQC' 1 2 1 '3D HNCO' 1 3 1 '3D HNCACB' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HNCA' 1 6 1 '3D HN(CO)CA' 1 7 1 '3D HNHA' 1 8 1 '3D HCC_TOCSY-NNH' 1 9 1 '3D CCC-TOCSY-NNH' 1 10 2 '3D HCCH-TOCSY' 1 11 2 '3D HCCH-COSY' 1 12 1 HBCBCGCDHD 1 13 1 '2D DQF-COSY' 1 14 1 '2D 1H-1H NOESY' 1 15 1 '2D 1H-13C HSQC' 1 16 1 '3D 1H-15N NOESY' 1 17 2 '3D 1H-13C NOESY' 1 18 2 '2D 1H-15N HSQC' 1 19 1 '2D 1H-15N NOE' 1 20 1 '2D 1H-15N T1' 1 21 1 '2D 1H-15N T1rho' 1 22 4 '3D HNCO-IPAP' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-1, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 13C; U-100% 15N] L14e ribosomal protein-2, 100% D2O' 2 '100% D2O' '1 mM [U-100% 15N] L14e ribosomal protein-3, 0.2 mM DSS-4, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' '1 mM [U-100% 15N] L14e ribosomal protein-5, 5 % C12E5-6, 1.0 r hexanol-7, 90% H2O/10% D2O' 4 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian INOVA 1 'Varian INOVA' 500 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2KDS _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KDS _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KDS _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMR ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 'Johnson, One Moon Scientific' 'peak picking' NMRView aqua 3 'Johnson, One Moon Scientific' 'chemical shift assignment' NMRView aqua 4 ;Linge, O'Donoghue and Nilges ; 'chemical shift assignment' ARIA 1.2 5 'Schwieters, Kuszewski, Tjandra and Clore' refinement X-PLOR_NIH 2.19 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KDS _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KDS _struct.title 'Structure of Ribosomal Protein L14e from Sulfolobus solfataricus' _struct.pdbx_descriptor '50S ribosomal protein L14e' _struct.pdbx_model_details 'closest to the average, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KDS _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN' _struct_keywords.text 'protein, hyperthmophile, sh3, Ribonucleoprotein, Ribosomal protein' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 67 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 79 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 68 _struct_conf.end_auth_comp_id ASN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 80 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 9 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 21 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 10 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 22 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 8 ? VAL A 10 ? ILE A 9 VAL A 11 A 2 LYS A 20 ? ILE A 26 ? LYS A 21 ILE A 27 A 3 PHE A 31 ? THR A 35 ? PHE A 32 THR A 36 A 4 ARG A 45 ? ASN A 49 ? ARG A 46 ASN A 50 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 9 ? N CYS A 10 O CYS A 21 ? O CYS A 22 A 2 3 N VAL A 22 ? N VAL A 23 O THR A 35 ? O THR A 36 A 3 4 N VAL A 34 ? N VAL A 35 O ARG A 46 ? O ARG A 47 # _atom_sites.entry_id 2KDS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 2 PRO PRO A . n A 1 2 ALA 2 3 3 ALA ALA A . n A 1 3 ILE 3 4 4 ILE ILE A . n A 1 4 GLU 4 5 5 GLU GLU A . n A 1 5 VAL 5 6 6 VAL VAL A . n A 1 6 GLY 6 7 7 GLY GLY A . n A 1 7 ARG 7 8 8 ARG ARG A . n A 1 8 ILE 8 9 9 ILE ILE A . n A 1 9 CYS 9 10 10 CYS CYS A . n A 1 10 VAL 10 11 11 VAL VAL A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 VAL 12 13 13 VAL VAL A . n A 1 13 LYS 13 14 14 LYS LYS A . n A 1 14 GLY 14 15 15 GLY GLY A . n A 1 15 ARG 15 16 16 ARG ARG A . n A 1 16 GLU 16 17 17 GLU GLU A . n A 1 17 ALA 17 18 18 ALA ALA A . n A 1 18 GLY 18 19 19 GLY GLY A . n A 1 19 SER 19 20 20 SER SER A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 CYS 21 22 22 CYS CYS A . n A 1 22 VAL 22 23 23 VAL VAL A . n A 1 23 ILE 23 24 24 ILE ILE A . n A 1 24 VAL 24 25 25 VAL VAL A . n A 1 25 ASP 25 26 26 ASP ASP A . n A 1 26 ILE 26 27 27 ILE ILE A . n A 1 27 ILE 27 28 28 ILE ILE A . n A 1 28 ASP 28 29 29 ASP ASP A . n A 1 29 ASP 29 30 30 ASP ASP A . n A 1 30 ASN 30 31 31 ASN ASN A . n A 1 31 PHE 31 32 32 PHE PHE A . n A 1 32 VAL 32 33 33 VAL VAL A . n A 1 33 LEU 33 34 34 LEU LEU A . n A 1 34 VAL 34 35 35 VAL VAL A . n A 1 35 THR 35 36 36 THR THR A . n A 1 36 GLY 36 37 37 GLY GLY A . n A 1 37 PRO 37 38 38 PRO PRO A . n A 1 38 LYS 38 39 39 LYS LYS A . n A 1 39 ASP 39 40 40 ASP ASP A . n A 1 40 ILE 40 41 41 ILE ILE A . n A 1 41 THR 41 42 42 THR THR A . n A 1 42 GLY 42 43 43 GLY GLY A . n A 1 43 VAL 43 44 44 VAL VAL A . n A 1 44 LYS 44 45 45 LYS LYS A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 ARG 46 47 47 ARG ARG A . n A 1 47 ARG 47 48 48 ARG ARG A . n A 1 48 VAL 48 49 49 VAL VAL A . n A 1 49 ASN 49 50 50 ASN ASN A . n A 1 50 ILE 50 51 51 ILE ILE A . n A 1 51 LEU 51 52 52 LEU LEU A . n A 1 52 HIS 52 53 53 HIS HIS A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 GLU 54 55 55 GLU GLU A . n A 1 55 PRO 55 56 56 PRO PRO A . n A 1 56 THR 56 57 57 THR THR A . n A 1 57 ASP 57 58 58 ASP ASP A . n A 1 58 LYS 58 59 59 LYS LYS A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 ILE 60 61 61 ILE ILE A . n A 1 61 ASP 61 62 62 ASP ASP A . n A 1 62 ILE 62 63 63 ILE ILE A . n A 1 63 GLN 63 64 64 GLN GLN A . n A 1 64 LYS 64 65 65 LYS LYS A . n A 1 65 GLY 65 66 66 GLY GLY A . n A 1 66 ALA 66 67 67 ALA ALA A . n A 1 67 SER 67 68 68 SER SER A . n A 1 68 ASP 68 69 69 ASP ASP A . n A 1 69 GLU 69 70 70 GLU GLU A . n A 1 70 GLU 70 71 71 GLU GLU A . n A 1 71 VAL 71 72 72 VAL VAL A . n A 1 72 LYS 72 73 73 LYS LYS A . n A 1 73 LYS 73 74 74 LYS LYS A . n A 1 74 LYS 74 75 75 LYS LYS A . n A 1 75 LEU 75 76 76 LEU LEU A . n A 1 76 GLU 76 77 77 GLU GLU A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 SER 78 79 79 SER SER A . n A 1 79 ASN 79 80 80 ASN ASN A . n A 1 80 LEU 80 81 81 LEU LEU A . n A 1 81 THR 81 82 82 THR THR A . n A 1 82 GLU 82 83 83 GLU GLU A . n A 1 83 TYR 83 84 84 TYR TYR A . n A 1 84 MET 84 85 85 MET MET A . n A 1 85 LYS 85 86 86 LYS LYS A . n A 1 86 GLU 86 87 87 GLU GLU A . n A 1 87 LYS 87 88 88 LYS LYS A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 LYS 89 90 90 LYS LYS A . n A 1 90 ILE 90 91 91 ILE ILE A . n A 1 91 ARG 91 92 92 ARG ARG A . n A 1 92 MET 92 93 93 MET MET A . n A 1 93 PRO 93 94 94 PRO PRO A . n A 1 94 THR 94 95 95 THR THR A . n A 1 95 LEU 95 96 96 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-10-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.048 _pdbx_nmr_ensemble_rms.distance_rms_dev_error ? _pdbx_nmr_ensemble_rms.entry_id 2KDS _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'L14e ribosomal protein-1' 1 ? mM '[U-100% 13C; U-100% 15N]' 1 'L14e ribosomal protein-2' 1 ? mM '[U-100% 13C; U-100% 15N]' 2 'L14e ribosomal protein-3' 1 ? mM '[U-100% 15N]' 3 DSS-4 0.2 ? mM ? 3 'L14e ribosomal protein-5' 1 ? mM '[U-100% 15N]' 4 C12E5-6 5 ? % ? 4 hexanol-7 1.0 ? % ? 4 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2KDS _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 58 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1307 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 584 _pdbx_nmr_constraints.NOE_long_range_total_count 246 _pdbx_nmr_constraints.NOE_medium_range_total_count 192 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 285 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 42 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 42 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A LEU 76 ? ? OG A SER 79 ? ? 2.14 2 3 O A LEU 76 ? ? OG A SER 79 ? ? 2.12 3 3 O A GLY 7 ? ? O A LYS 60 ? ? 2.19 4 4 H A GLU 5 ? ? HH11 A ARG 8 ? ? 1.28 5 4 HH21 A ARG 8 ? ? O A THR 57 ? ? 1.59 6 4 O A LEU 76 ? ? OG A SER 79 ? ? 2.13 7 5 H A GLU 5 ? ? HH21 A ARG 8 ? ? 1.14 8 5 H A LYS 45 ? ? HH22 A ARG 47 ? ? 1.26 9 6 H A CYS 10 ? ? O A CYS 22 ? ? 1.50 10 6 O A CYS 10 ? ? H A CYS 22 ? ? 1.60 11 6 O A GLY 37 ? ? O A VAL 44 ? ? 2.16 12 7 O A CYS 10 ? ? H A CYS 22 ? ? 1.56 13 7 O A SER 68 ? ? H A VAL 72 ? ? 1.57 14 8 O A SER 68 ? ? H A VAL 72 ? ? 1.57 15 9 H A CYS 10 ? ? O A CYS 22 ? ? 1.58 16 9 O A LEU 76 ? ? OG A SER 79 ? ? 2.11 17 10 H A CYS 10 ? ? O A CYS 22 ? ? 1.47 18 10 O A CYS 10 ? ? H A CYS 22 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 6 ? ? -72.43 -153.66 2 1 ARG A 16 ? ? 40.07 99.99 3 1 GLU A 17 ? ? 33.30 109.35 4 1 ALA A 18 ? ? -171.75 16.37 5 1 VAL A 25 ? ? -151.94 69.57 6 1 ASP A 26 ? ? 171.19 152.89 7 1 ILE A 28 ? ? -99.75 -111.50 8 1 ASP A 30 ? ? 164.34 -50.33 9 1 ILE A 41 ? ? -96.87 -77.83 10 1 LYS A 45 ? ? -95.33 -75.57 11 1 ASP A 62 ? ? -179.60 87.63 12 1 LYS A 65 ? ? 114.11 108.57 13 1 GLU A 83 ? ? -157.66 -21.17 14 1 MET A 85 ? ? -94.82 -125.30 15 1 LYS A 88 ? ? 61.03 75.53 16 1 MET A 93 ? ? -172.04 -58.37 17 2 ALA A 3 ? ? -150.66 70.12 18 2 VAL A 6 ? ? -43.19 -149.71 19 2 ARG A 16 ? ? 49.35 106.65 20 2 ASP A 26 ? ? 172.14 137.68 21 2 ILE A 28 ? ? -97.05 -79.41 22 2 ILE A 41 ? ? -96.24 -78.54 23 2 LYS A 45 ? ? -92.69 -131.18 24 2 GLU A 83 ? ? -147.42 -28.35 25 2 MET A 85 ? ? -88.09 -135.92 26 2 LYS A 88 ? ? 56.86 117.34 27 2 MET A 93 ? ? -146.81 -45.58 28 2 PRO A 94 ? ? -63.76 -171.96 29 3 ALA A 3 ? ? 62.08 175.39 30 3 ARG A 16 ? ? 38.38 104.99 31 3 GLU A 17 ? ? 35.27 110.18 32 3 ALA A 18 ? ? -163.58 16.60 33 3 ASP A 26 ? ? 164.97 148.66 34 3 ILE A 28 ? ? -97.64 -80.88 35 3 ILE A 41 ? ? -94.86 -71.56 36 3 LYS A 45 ? ? -88.98 -79.55 37 3 ASP A 58 ? ? -88.98 39.11 38 3 ASP A 62 ? ? -173.39 85.94 39 3 LYS A 65 ? ? 99.85 99.80 40 3 GLU A 83 ? ? -155.79 -23.62 41 3 MET A 85 ? ? -84.25 -122.92 42 3 LYS A 86 ? ? 46.13 14.86 43 3 LYS A 88 ? ? 57.08 143.77 44 3 LYS A 90 ? ? -69.52 -157.59 45 3 MET A 93 ? ? -155.83 -51.11 46 4 ALA A 3 ? ? 48.38 -171.10 47 4 ARG A 8 ? ? 39.80 -171.43 48 4 ARG A 16 ? ? 45.13 94.63 49 4 GLU A 17 ? ? 41.59 110.00 50 4 ALA A 18 ? ? 178.60 8.34 51 4 ASP A 26 ? ? 169.79 148.22 52 4 ILE A 41 ? ? -98.03 -78.57 53 4 LYS A 45 ? ? -94.15 -78.23 54 4 GLN A 64 ? ? -70.88 -107.80 55 4 LYS A 65 ? ? -177.35 119.25 56 4 GLU A 83 ? ? -156.35 -14.91 57 4 MET A 85 ? ? -109.39 -120.40 58 4 LYS A 88 ? ? 100.43 -137.68 59 4 ILE A 89 ? ? -110.39 -108.74 60 4 MET A 93 ? ? -157.96 -53.06 61 5 ALA A 3 ? ? 37.20 -124.68 62 5 VAL A 6 ? ? 111.12 145.59 63 5 ARG A 16 ? ? 53.20 91.71 64 5 GLU A 17 ? ? 45.10 108.28 65 5 ALA A 18 ? ? 155.61 62.89 66 5 ASP A 26 ? ? 169.08 148.75 67 5 ILE A 28 ? ? -104.89 -122.14 68 5 ASP A 30 ? ? 170.01 -58.47 69 5 LYS A 45 ? ? -95.58 -81.59 70 5 LYS A 65 ? ? 54.89 102.09 71 5 ASN A 80 ? ? 71.63 43.85 72 5 GLU A 83 ? ? -168.82 -11.27 73 5 MET A 85 ? ? -98.10 -127.09 74 5 LYS A 88 ? ? 88.74 123.06 75 6 ARG A 16 ? ? 55.73 134.87 76 6 GLU A 17 ? ? 48.75 20.40 77 6 VAL A 25 ? ? -151.43 72.36 78 6 ASP A 26 ? ? 170.12 147.20 79 6 ILE A 28 ? ? -100.37 -104.88 80 6 ASP A 30 ? ? 164.00 -46.02 81 6 PRO A 38 ? ? -57.64 109.25 82 6 LYS A 45 ? ? -86.11 -78.41 83 6 LYS A 65 ? ? 100.66 98.27 84 6 GLU A 83 ? ? -156.09 -11.31 85 6 MET A 85 ? ? -90.73 -110.91 86 6 LYS A 88 ? ? 85.16 126.46 87 6 PRO A 94 ? ? -87.39 -73.46 88 7 ALA A 3 ? ? 62.28 -101.88 89 7 ARG A 16 ? ? 118.44 124.83 90 7 GLU A 17 ? ? 73.06 -86.26 91 7 ALA A 18 ? ? 8.19 113.51 92 7 VAL A 25 ? ? -105.18 -151.37 93 7 ILE A 41 ? ? -96.22 -76.88 94 7 LYS A 45 ? ? -94.04 -78.86 95 7 LYS A 65 ? ? 53.03 124.55 96 7 GLU A 83 ? ? -161.67 -18.83 97 7 MET A 85 ? ? -95.58 -123.95 98 7 GLU A 87 ? ? -150.17 -60.50 99 7 LYS A 88 ? ? 45.69 -124.43 100 7 MET A 93 ? ? -166.32 -50.75 101 8 VAL A 6 ? ? 94.95 127.33 102 8 ARG A 16 ? ? 27.32 91.45 103 8 GLU A 17 ? ? 93.17 132.55 104 8 ALA A 18 ? ? 156.67 104.70 105 8 ASP A 26 ? ? 165.83 148.06 106 8 ILE A 28 ? ? -97.03 -81.06 107 8 ILE A 41 ? ? -96.09 -76.40 108 8 LYS A 45 ? ? -89.16 -78.25 109 8 LYS A 59 ? ? -171.61 -174.57 110 8 GLN A 64 ? ? -72.32 -121.02 111 8 LYS A 65 ? ? -173.78 131.45 112 8 ASN A 80 ? ? 70.40 50.35 113 8 GLU A 83 ? ? -155.39 -18.20 114 8 MET A 85 ? ? -104.06 -125.95 115 8 LYS A 88 ? ? 37.07 60.34 116 8 MET A 93 ? ? -131.25 -50.64 117 9 ARG A 16 ? ? 49.60 87.01 118 9 GLU A 17 ? ? 112.62 152.07 119 9 ALA A 18 ? ? 155.95 83.92 120 9 VAL A 25 ? ? -156.78 76.35 121 9 ASP A 26 ? ? 171.63 150.89 122 9 ILE A 28 ? ? -121.55 -117.64 123 9 ASP A 30 ? ? 121.98 -25.99 124 9 ILE A 41 ? ? -96.50 -71.08 125 9 LYS A 45 ? ? -139.16 -69.92 126 9 LYS A 59 ? ? -114.06 -164.63 127 9 ASP A 62 ? ? -161.63 107.09 128 9 LYS A 65 ? ? 131.20 75.03 129 9 GLU A 83 ? ? -164.84 0.26 130 9 MET A 85 ? ? -121.30 -120.97 131 10 ALA A 3 ? ? -171.66 -40.28 132 10 VAL A 6 ? ? 169.46 123.21 133 10 ARG A 16 ? ? 34.68 90.53 134 10 GLU A 17 ? ? 89.71 132.90 135 10 ALA A 18 ? ? 153.59 106.70 136 10 ASP A 26 ? ? 168.12 144.84 137 10 ILE A 28 ? ? -99.56 -84.98 138 10 ASP A 30 ? ? 90.08 -26.86 139 10 ILE A 41 ? ? -96.50 -81.16 140 10 LYS A 45 ? ? -92.38 -75.64 141 10 LYS A 59 ? ? -172.32 -175.78 142 10 LYS A 65 ? ? 98.21 90.17 143 10 ASN A 80 ? ? 71.16 51.13 144 10 GLU A 83 ? ? -153.92 -19.06 145 10 MET A 85 ? ? -103.65 -122.75 146 10 LYS A 86 ? ? 43.14 16.03 147 10 LYS A 88 ? ? 72.76 124.88 148 10 MET A 93 ? ? 175.01 -43.83 #