HEADER PROTEIN BINDING 27-JAN-09 2KEA OBSLTE 27-NOV-19 2KEA 6UZJ TITLE NMR SOLUTION STRUCTURE OF THE HACS1 SH3 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAM DOMAIN-CONTAINING PROTEIN SAMSN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SAM DOMAIN, SH3 DOMAIN AND NUCLEAR LOCALIZATION SIGNALS COMPND 5 PROTEIN 1, SH3-SAM ADAPTOR PROTEIN, HEMATOPOIETIC ADAPTOR CONTAINING COMPND 6 SH3 AND SAM DOMAINS 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SAMSN1, HACS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K12; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDEST586; SOURCE 12 OTHER_DETAILS: HIS6-MBP-TEV FUSION EXPRESSION VECTOR KEYWDS SH3 DOMAIN, ALTERNATIVE SPLICING, PHOSPHOPROTEIN, POLYMORPHISM, KEYWDS 2 PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR L.DONALDSON REVDAT 2 27-NOV-19 2KEA 1 OBSLTE REMARK REVDAT 1 02-FEB-10 2KEA 0 JRNL AUTH L.DONALDSON JRNL TITL NMR SOLUTION STRUCTURE OF THE HACS1 SH3 DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, X-PLOR NIH 2.21 REMARK 3 AUTHORS : GUNTERT, P. ET AL. (CYANA), SCHWIETERS, C.D. ET REMARK 3 AL. (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CYANA 2.1 WAS USED TO GENERATE 250 REMARK 3 STRUCTURES. THE LOWEST ENERGY 25 STRUCTURES WERE DEEMED THE REMARK 3 INITIAL ENSEMBLE. 5000 STEPS OF TORSION ANGLE DYNAMICS WAS USED., REMARK 3 XPLOR-NIH 2.21 WAS USED TO REFINE THE 25 CANDIDATE STRUCTURE IN REMARK 3 EXPLICIT SOLVENT. DETAILS: 2000 HOT STEPS OF CARTESIAN DYNAMICS REMARK 3 AT 500 K FOLLOWED BY 500 STEPS OF COOLING IN 100 K INCREMENTS TO REMARK 3 100 K REMARK 4 REMARK 4 2KEA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000101013. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.8 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-98% 13C; U-98% 15N] REMARK 210 HACS1SH3-1, 10 % D2O-2, 0.05 % REMARK 210 SODIUM AZIDE-3, 150 MM SODIUM REMARK 210 CHLORIDE-4, 20 MM SODIUM REMARK 210 PHOSPHATE-5, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCACB; 3D H(CCO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : NMRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, WATER REMARK 210 REFINMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 25 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 240 -74.16 -56.01 REMARK 500 1 LYS A 246 120.24 -38.29 REMARK 500 2 LYS A 246 95.83 -62.12 REMARK 500 2 ASP A 248 151.99 -38.20 REMARK 500 2 PRO A 257 35.36 -71.75 REMARK 500 2 MET A 258 -70.71 -112.21 REMARK 500 3 PRO A 234 -154.06 -85.77 REMARK 500 3 TYR A 237 23.69 -76.37 REMARK 500 3 PRO A 257 3.99 -65.28 REMARK 500 5 PHE A 232 101.67 -179.94 REMARK 500 5 PRO A 234 -70.05 -56.82 REMARK 500 5 THR A 239 25.96 -142.63 REMARK 500 5 SER A 241 -167.02 -117.25 REMARK 500 5 LYS A 246 130.73 -28.53 REMARK 500 6 LYS A 245 -156.78 -120.74 REMARK 500 6 PRO A 257 33.83 -71.23 REMARK 500 7 PRO A 221 21.64 -77.70 REMARK 500 7 CYS A 223 46.07 -80.21 REMARK 500 7 PHE A 232 103.52 178.52 REMARK 500 7 ASP A 238 162.17 -48.79 REMARK 500 7 THR A 239 -0.60 -143.13 REMARK 500 7 LYS A 255 -94.87 -86.09 REMARK 500 7 THR A 256 90.59 49.11 REMARK 500 7 PRO A 257 59.85 -63.12 REMARK 500 8 PRO A 234 -156.54 -76.07 REMARK 500 8 PRO A 257 -77.17 -27.53 REMARK 500 9 PHE A 274 -9.03 -51.74 REMARK 500 10 ASP A 240 -68.34 -91.47 REMARK 500 REMARK 500 REMARK: NULL DBREF 2KEA A 220 282 UNP Q9NSI8 SAMN1_HUMAN 162 224 SEQRES 1 A 63 GLY PRO PHE CYS GLY ARG ALA ARG VAL HIS THR ASP PHE SEQRES 2 A 63 THR PRO SER PRO TYR ASP THR ASP SER LEU LYS ILE LYS SEQRES 3 A 63 LYS GLY ASP ILE ILE ASP ILE ILE CYS LYS THR PRO MET SEQRES 4 A 63 GLY MET TRP THR GLY MET LEU ASN ASN LYS VAL GLY ASN SEQRES 5 A 63 PHE LYS PHE ILE TYR VAL ASP VAL ILE SER GLU HELIX 1 1 LYS A 273 ILE A 275 5 3 SHEET 1 A 5 LYS A 268 PHE A 272 0 SHEET 2 A 5 TRP A 261 LEU A 265 -1 N TRP A 261 O PHE A 272 SHEET 3 A 5 ILE A 249 CYS A 254 -1 N ASP A 251 O MET A 264 SHEET 4 A 5 ARG A 225 VAL A 228 -1 N ALA A 226 O ILE A 250 SHEET 5 A 5 VAL A 277 VAL A 279 -1 O ASP A 278 N ARG A 227 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1