HEADER LIGASE 30-JAN-09 2KEO TITLE SOLUTION NMR STRUCTURE OF HUMAN PROTEIN HS00059, CYTOCHROME-B5-LIKE TITLE 2 DOMAIN OF THE HERC2 E3 LIGASE. NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM (NESG) TARGET HT98A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE E3 UBIQUITIN-PROTEIN LIGASE HERC2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HECT DOMAIN AND RCC1-LIKE DOMAIN-CONTAINING PROTEIN 2; COMPND 5 EC: 6.3.2.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HERC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: P15TV-LIC KEYWDS PROTEIN OF UNKNOWN FUNCTION, HERC2 CYTOCHROME DOMAIN, LIGASE, METAL- KEYWDS 2 BINDING, PHOSPHOPROTEIN, UBL CONJUGATION PATHWAY, WD REPEAT, ZINC- KEYWDS 3 FINGER, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 4 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,A.GUTMANAS,C.FARES,H.QUYANG,Y.LI,G.MONTELIONE,C.ARROWSMITH, AUTHOR 2 S.DHE-PAGANON,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 18-JAN-12 2KEO 1 REMARK VERSN REVDAT 2 03-MAR-09 2KEO 1 REMARK REVDAT 1 24-FEB-09 2KEO 0 JRNL AUTH A.LEMAK,A.GUTMANAS,C.FARES,H.QUYANG,Y.LI,G.MONTELIONE, JRNL AUTH 2 C.ARROWSMITH,S.DHE-PAGANON JRNL TITL SOLUTION NMR STRUCTURE OF HUMAN PROTEIN HS00059 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.LEMAK,A.GUTMANAS,S.CHITAYAT,M.KARRA,C.FARES,M.SUNNERHAGEN, REMARK 1 AUTH 2 C.H.ARROWSMITH REMARK 1 TITL A NOVEL STRATEGY FOR NMR RESONANCE ASSIGNMENT AND PROTEIN REMARK 1 TITL 2 STRUCTURE DETERMINATION. REMARK 1 REF J.BIOMOL.NMR V. 49 27 2011 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 21161328 REMARK 1 DOI 10.1007/S10858-010-9458-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KEO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-09. REMARK 100 THE RCSB ID CODE IS RCSB101027. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] HS00059-1, REMARK 210 10 MM TRIS-2, 300 MM SODIUM REMARK 210 CHLORIDE-3, 10 UM ZNSO4-4, 10 MM REMARK 210 DTT-5, 0.01 % NAN3-6, 10 MM REMARK 210 BENZAMIDINE-7, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D 1H-15N NOESY; REMARK 210 3D HCCH-TOCSY; 3D (H)CCH-TOCSY; REMARK 210 3D 1H-13C NOESY; 3D 1H-13C_AROM REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, FMC, TALOS REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS IN REMARK 210 WATER BATH REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 ARG A 11 REMARK 465 GLU A 12 REMARK 465 ASN A 13 REMARK 465 LEU A 14 REMARK 465 TYR A 15 REMARK 465 PHE A 16 REMARK 465 GLN A 17 REMARK 465 GLY A 18 REMARK 465 ASN A 19 REMARK 465 ASN A 20 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 62 -3.56 75.45 REMARK 500 2 LEU A 111 -57.59 -176.76 REMARK 500 4 ASN A 62 45.41 -86.51 REMARK 500 5 GLU A 104 96.52 -69.63 REMARK 500 7 LEU A 111 103.28 -169.20 REMARK 500 9 GLU A 61 -73.56 -67.87 REMARK 500 10 LEU A 111 -55.92 -162.50 REMARK 500 11 ALA A 69 99.14 -67.26 REMARK 500 12 ASN A 62 74.26 -112.52 REMARK 500 12 LEU A 111 -71.17 -145.09 REMARK 500 13 ALA A 69 94.39 -67.65 REMARK 500 13 LEU A 111 -45.88 -159.46 REMARK 500 14 CYS A 94 97.88 -67.07 REMARK 500 18 LYS A 22 101.89 -54.91 REMARK 500 18 CYS A 94 83.19 -68.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HT98A RELATED DB: TARGETDB DBREF 2KEO A 19 112 UNP O95714 HERC2_HUMAN 1203 1296 SEQADV 2KEO MET A 1 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 2 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 3 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 4 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 5 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 6 UNP O95714 EXPRESSION TAG SEQADV 2KEO HIS A 7 UNP O95714 EXPRESSION TAG SEQADV 2KEO SER A 8 UNP O95714 EXPRESSION TAG SEQADV 2KEO SER A 9 UNP O95714 EXPRESSION TAG SEQADV 2KEO GLY A 10 UNP O95714 EXPRESSION TAG SEQADV 2KEO ARG A 11 UNP O95714 EXPRESSION TAG SEQADV 2KEO GLU A 12 UNP O95714 EXPRESSION TAG SEQADV 2KEO ASN A 13 UNP O95714 EXPRESSION TAG SEQADV 2KEO LEU A 14 UNP O95714 EXPRESSION TAG SEQADV 2KEO TYR A 15 UNP O95714 EXPRESSION TAG SEQADV 2KEO PHE A 16 UNP O95714 EXPRESSION TAG SEQADV 2KEO GLN A 17 UNP O95714 EXPRESSION TAG SEQADV 2KEO GLY A 18 UNP O95714 EXPRESSION TAG SEQADV 2KEO LYS A 22 UNP O95714 GLU 1206 CONFLICT SEQADV 2KEO VAL A 26 UNP O95714 ILE 1210 CONFLICT SEQADV 2KEO ILE A 28 UNP O95714 LYS 1212 CONFLICT SEQADV 2KEO ASN A 36 UNP O95714 LYS 1220 CONFLICT SEQADV 2KEO GLU A 61 UNP O95714 GLY 1245 CONFLICT SEQADV 2KEO GLY A 105 UNP O95714 ILE 1289 CONFLICT SEQRES 1 A 112 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 112 LEU TYR PHE GLN GLY ASN ASN GLU LYS VAL THR LEU VAL SEQRES 3 A 112 ARG ILE ALA ASP LEU GLU ASN HIS ASN ASN ASP GLY GLY SEQRES 4 A 112 PHE TRP THR VAL ILE ASP GLY LYS VAL TYR ASP ILE LYS SEQRES 5 A 112 ASP PHE GLN THR GLN SER LEU THR GLU ASN SER ILE LEU SEQRES 6 A 112 ALA GLN PHE ALA GLY GLU ASP PRO VAL VAL ALA LEU GLU SEQRES 7 A 112 ALA ALA LEU GLN PHE GLU ASP THR ARG GLU SER MET HIS SEQRES 8 A 112 ALA PHE CYS VAL GLY GLN TYR LEU GLU PRO ASP GLN GLU SEQRES 9 A 112 GLY VAL THR ILE PRO ASP LEU GLY HELIX 1 1 ARG A 27 GLY A 38 1 12 HELIX 2 2 ILE A 51 LEU A 59 1 9 HELIX 3 3 LEU A 65 ALA A 69 5 5 HELIX 4 4 ASP A 72 PHE A 83 1 12 HELIX 5 5 ASP A 85 GLU A 88 5 4 HELIX 6 6 SER A 89 PHE A 93 1 5 HELIX 7 7 GLU A 100 GLY A 105 1 6 SHEET 1 A 4 LEU A 25 VAL A 26 0 SHEET 2 A 4 CYS A 94 TYR A 98 1 O GLN A 97 N VAL A 26 SHEET 3 A 4 LYS A 47 ASP A 50 -1 N VAL A 48 O GLY A 96 SHEET 4 A 4 TRP A 41 ILE A 44 -1 N ILE A 44 O LYS A 47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1