HEADER TRANSFERASE 18-MAR-09 2KGT TITLE SOLUTION STRUCTURE OF SH3 DOMAIN OF PTK6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN, RESIDUES 1-72; COMPND 5 SYNONYM: BREAST TUMOR KINASE, TYROSINE-PROTEIN KINASE BRK; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX4T-1 KEYWDS SH3 DOMAIN, SRC KINASE, PTK6, ATP-BINDING, CYTOPLASM, KINASE, KEYWDS 2 NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, SH2 KEYWDS 3 DOMAIN, TRANSFERASE, TYROSINE-PROTEIN KINASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.LEE,S.KO REVDAT 3 14-JUN-23 2KGT 1 REMARK REVDAT 2 26-FEB-20 2KGT 1 REMARK REVDAT 1 23-MAR-10 2KGT 0 JRNL AUTH W.LEE,S.KO JRNL TITL THE SOLUTION STRUCTURE OF SH3 DOMAIN OF PTK6 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.2.5, CYANA 2.2.5 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KGT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000101102. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.2MM [U-99% 15N] SH DOMAIN-1, REMARK 210 90% H2O/10% D2O; 0.2MM [U-99% REMARK 210 13C; U-99% 15N] SH DOMAIN-2, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; 3D HNCO; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : DRX; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRDRAW, AUTOASSIGN, NMRPIPE, REMARK 210 SPARKY, MOLMOL, PYMOL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 43 -72.17 -89.51 REMARK 500 1 VAL A 57 -67.33 -145.55 REMARK 500 1 TYR A 66 -61.13 -91.48 REMARK 500 2 TRP A 17 162.70 -46.53 REMARK 500 2 ASP A 18 102.20 -48.83 REMARK 500 2 SER A 28 79.40 -119.73 REMARK 500 2 GLN A 43 -73.43 -95.90 REMARK 500 2 VAL A 57 -65.98 -141.66 REMARK 500 3 HIS A 8 40.81 -95.28 REMARK 500 3 PRO A 11 -170.79 -69.83 REMARK 500 3 ASP A 18 93.67 62.21 REMARK 500 3 GLN A 43 -74.85 -96.35 REMARK 500 3 ARG A 70 68.40 -105.25 REMARK 500 4 VAL A 2 128.96 -173.51 REMARK 500 4 PRO A 11 75.08 -69.79 REMARK 500 4 LEU A 16 84.09 61.08 REMARK 500 4 ASP A 18 75.48 40.34 REMARK 500 4 GLN A 43 -74.32 -92.96 REMARK 500 4 VAL A 57 -69.46 -141.80 REMARK 500 5 PRO A 11 -171.81 -69.70 REMARK 500 5 TRP A 17 160.72 -45.52 REMARK 500 5 ASP A 18 101.86 -48.81 REMARK 500 5 GLN A 43 -74.88 -105.02 REMARK 500 5 VAL A 57 -65.39 -145.14 REMARK 500 6 GLN A 6 57.71 -95.07 REMARK 500 6 PRO A 11 -170.68 -69.78 REMARK 500 6 GLN A 43 -74.63 -87.74 REMARK 500 6 VAL A 57 -68.71 -131.11 REMARK 500 7 LEU A 16 78.42 49.72 REMARK 500 7 TRP A 17 87.30 -67.42 REMARK 500 7 GLN A 43 -70.93 -88.58 REMARK 500 7 VAL A 57 -67.04 -145.20 REMARK 500 7 GLU A 71 174.45 -59.54 REMARK 500 8 PRO A 11 -173.23 -69.80 REMARK 500 8 LEU A 16 68.54 -112.29 REMARK 500 8 TRP A 17 159.38 -44.38 REMARK 500 8 ASP A 18 101.50 -48.08 REMARK 500 8 GLN A 43 -74.68 -94.35 REMARK 500 8 VAL A 57 -68.85 -133.11 REMARK 500 9 PRO A 11 74.75 -69.73 REMARK 500 9 LEU A 16 83.56 59.42 REMARK 500 9 GLN A 43 -68.47 -96.65 REMARK 500 9 VAL A 57 -65.26 -144.77 REMARK 500 10 SER A 3 45.57 -109.19 REMARK 500 10 LEU A 9 66.14 -109.63 REMARK 500 10 LEU A 16 70.20 -114.92 REMARK 500 10 TRP A 17 163.01 -46.08 REMARK 500 10 ASP A 18 100.90 -48.15 REMARK 500 10 SER A 28 69.10 -115.31 REMARK 500 10 GLN A 43 -73.06 -119.31 REMARK 500 REMARK 500 THIS ENTRY HAS 120 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16219 RELATED DB: BMRB DBREF 2KGT A 1 72 UNP Q13882 PTK6_HUMAN 1 72 SEQRES 1 A 72 MET VAL SER ARG ASP GLN ALA HIS LEU GLY PRO LYS TYR SEQRES 2 A 72 VAL GLY LEU TRP ASP PHE LYS SER ARG THR ASP GLU GLU SEQRES 3 A 72 LEU SER PHE ARG ALA GLY ASP VAL PHE HIS VAL ALA ARG SEQRES 4 A 72 LYS GLU GLU GLN TRP TRP TRP ALA THR LEU LEU ASP GLU SEQRES 5 A 72 ALA GLY GLY ALA VAL ALA GLN GLY TYR VAL PRO HIS ASN SEQRES 6 A 72 TYR LEU ALA GLU ARG GLU THR SHEET 1 A 2 LYS A 12 VAL A 14 0 SHEET 2 A 2 ALA A 68 ARG A 70 -1 O ALA A 68 N VAL A 14 SHEET 1 B 3 PHE A 35 LYS A 40 0 SHEET 2 B 3 TRP A 45 LEU A 50 -1 O TRP A 46 N ARG A 39 SHEET 3 B 3 ALA A 56 VAL A 62 -1 O GLY A 60 N ALA A 47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1