HEADER BIOSYNTHETIC PROTEIN 10-APR-09 2KHR TITLE SOLUTION STRUCTURE OF RV2377C, A MBTH-LIKE PROTEIN FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN MBTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MBTH, MT2445.1, MTCY27.03, RV2377C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21PRO; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFED PET28B KEYWDS SIDEROPHORES, MYCOBACTIN, MTBH-LIKE, 2-HYDROXYPHENYLOXAZOLINE, KEYWDS 2 TUBERCULOSIS, BIOSYNTHETIC PROTEIN, STRUCTURAL GENOMICS, SEATTLE KEYWDS 3 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,C.Y.KIM,T.C.TERWILLIGER,SEATTLE STRUCTURAL GENOMICS CENTER AUTHOR 2 FOR INFECTIOUS DISEASE (SSGCID) REVDAT 5 08-MAY-24 2KHR 1 REMARK REVDAT 4 14-JUN-23 2KHR 1 REMARK REVDAT 3 26-FEB-20 2KHR 1 REMARK SEQADV REVDAT 2 11-AUG-10 2KHR 1 JRNL TITLE REVDAT 1 05-MAY-09 2KHR 0 JRNL AUTH G.W.BUCHKO,C.Y.KIM,T.C.TERWILLIGER,P.J.MYLER JRNL TITL SOLUTION STRUCTURE OF RV2377C-FOUNDING MEMBER OF THE JRNL TITL 2 MBTH-LIKE PROTEIN FAMILY. JRNL REF TUBERCULOSIS (EDINB) V. 90 245 2010 JRNL REFN ISSN 1472-9792 JRNL PMID 20434955 JRNL DOI 10.1016/J.TUBE.2010.04.002 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 ITERATIVELY USING CYANA (AUTOMATED NOESYASSIGNMENTS). A TOTAL OF REMARK 3 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE REMARK 3 FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED REMARK 3 MOLECULAR DYNAMICS/ENERGY REMARK IN EXPLICIT WATER (CNS) AFTER REMARK 3 ADDING 10% TO THE UPPER BOUNDARY LIMIT. THE FINAL SET OF REMARK 3 STRUCTURES CONTAINED NO DIHEDRAL VIOLATIONS GREATER THAN 2 REMARK 3 DEGREE OR DISTANCE VIOLATIONS TOTAL THAT WERE GREATER THAN 0.05 REMARK 3 ANGSTROM. REMARK 4 REMARK 4 2KHR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000101136. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : 0.32 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM [U-98% 13C; U-98% 15N] REMARK 210 RV2377C, 300 MM SODIUM CHLORIDE, REMARK 210 20 MM TRIS, 1 MM DTT, 90% H2O/10% REMARK 210 D2O; 2 MM [U-98% 13C; U-98% 15N] REMARK 210 RV2377C, 300 MM SODIUM CHLORIDE, REMARK 210 20 MM TRIS, 1 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 3D 1H-15N TOCSY; REMARK 210 3D HNCACB; 3D HNCO; 3D HN(COCA) REMARK 210 CB; 3D C(CO)NH; 3D HCCH-TOCSY; REMARK 210 2D 1H-13C HSQC; 3D H(CCO)NH; REMARK 210 DEUTERIUM X-CHANGE REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 900 MHZ; 600 MHZ; 500 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2007, SPARKY 3.115, PSVS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 4 106.98 -59.99 REMARK 500 1 ASN A 13 -66.39 -100.19 REMARK 500 1 PHE A 32 -33.09 -161.53 REMARK 500 1 PRO A 36 -106.21 -78.75 REMARK 500 1 SER A 47 128.31 -30.89 REMARK 500 1 SER A 66 100.66 65.18 REMARK 500 1 ASP A 69 72.17 61.10 REMARK 500 2 PHE A 32 -36.48 -159.17 REMARK 500 2 PRO A 36 -155.93 -69.44 REMARK 500 2 TRP A 59 89.82 53.09 REMARK 500 2 ASP A 61 -157.21 -97.89 REMARK 500 2 LEU A 67 -65.30 -122.26 REMARK 500 3 PRO A 36 -152.04 -72.43 REMARK 500 3 ARG A 68 -40.03 -132.76 REMARK 500 4 PHE A 9 -159.42 -97.47 REMARK 500 4 PRO A 36 -107.96 -85.04 REMARK 500 4 SER A 47 127.80 -31.36 REMARK 500 4 LYS A 65 97.78 -65.06 REMARK 500 4 MET A 71 79.63 54.06 REMARK 500 4 GLU A 73 84.18 70.17 REMARK 500 5 MET A 4 77.55 61.29 REMARK 500 5 VAL A 31 2.50 -69.79 REMARK 500 5 PRO A 36 -157.15 -72.90 REMARK 500 5 GLU A 45 98.40 -69.08 REMARK 500 5 SER A 47 128.27 -35.71 REMARK 500 6 ASP A 11 -161.28 -112.33 REMARK 500 6 PRO A 36 -101.50 -77.99 REMARK 500 7 ASN A 13 -157.67 -157.36 REMARK 500 7 PRO A 36 -153.25 -75.49 REMARK 500 7 SER A 47 128.19 -31.41 REMARK 500 7 TRP A 59 83.78 62.98 REMARK 500 7 ARG A 63 85.26 58.59 REMARK 500 7 LYS A 65 95.75 -161.35 REMARK 500 7 SER A 66 95.37 -63.06 REMARK 500 7 LEU A 67 -30.62 -173.35 REMARK 500 8 PRO A 8 23.44 -79.78 REMARK 500 8 ASN A 13 101.64 -160.04 REMARK 500 8 PRO A 36 -154.72 -72.47 REMARK 500 8 THR A 60 80.23 64.27 REMARK 500 9 ASP A 24 -166.48 -129.37 REMARK 500 9 GLN A 25 -53.47 -125.46 REMARK 500 9 PRO A 36 -163.38 -68.78 REMARK 500 9 SER A 47 128.40 -39.29 REMARK 500 9 LEU A 62 34.81 -92.65 REMARK 500 9 PRO A 64 114.18 -33.58 REMARK 500 10 ASP A 10 -52.74 73.53 REMARK 500 10 GLN A 25 -52.79 -129.39 REMARK 500 10 PRO A 36 -98.60 -68.96 REMARK 500 10 LEU A 62 90.18 69.42 REMARK 500 10 LYS A 65 106.52 -56.09 REMARK 500 REMARK 500 THIS ENTRY HAS 104 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16253 RELATED DB: BMRB REMARK 900 RELATED ID: MYTUD.1649.A RELATED DB: TARGETDB DBREF 2KHR A 4 74 UNP O05821 MBTH_MYCTU 1 71 SEQADV 2KHR GLY A 1 UNP O05821 EXPRESSION TAG SEQADV 2KHR SER A 2 UNP O05821 EXPRESSION TAG SEQADV 2KHR HIS A 3 UNP O05821 EXPRESSION TAG SEQRES 1 A 74 GLY SER HIS MET SER THR ASN PRO PHE ASP ASP ASP ASN SEQRES 2 A 74 GLY ALA PHE PHE VAL LEU VAL ASN ASP GLU ASP GLN HIS SEQRES 3 A 74 SER LEU TRP PRO VAL PHE ALA ASP ILE PRO ALA GLY TRP SEQRES 4 A 74 ARG VAL VAL HIS GLY GLU ALA SER ARG ALA ALA CYS LEU SEQRES 5 A 74 ASP TYR VAL GLU LYS ASN TRP THR ASP LEU ARG PRO LYS SEQRES 6 A 74 SER LEU ARG ASP ALA MET VAL GLU ASP HELIX 1 1 SER A 47 ASP A 61 1 15 SHEET 1 A 3 SER A 27 PRO A 30 0 SHEET 2 A 3 PHE A 16 ASN A 21 -1 N PHE A 17 O TRP A 29 SHEET 3 A 3 TRP A 39 HIS A 43 -1 O HIS A 43 N VAL A 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1