HEADER ANTIMICROBIAL PROTEIN 28-MAY-09 2KJF TITLE THE SOLUTION STRUCTURE OF THE CIRCULAR BACTERIOCIN CARNOCYCLIN A TITLE 2 (CCLA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARNOCYCLIN-A; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CARNOBACTERIUM MALTAROMATICUM; SOURCE 3 ORGANISM_COMMON: CARNOBACTERIUM PISCICOLA; SOURCE 4 ORGANISM_TAXID: 2751; SOURCE 5 STRAIN: UAL307 KEYWDS CIRCULAR BACTERIOCIN, ANTIMICROBIAL PEPTIDE, HELICAL, SAPOSIN-FOLD, KEYWDS 2 ANTIBIOTIC, ANTIMICROBIAL, BACTERIOCIN, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.A.MARTIN-VISSCHER,X.GONG,M.DUSZYK,J.VEDERAS REVDAT 4 16-MAR-22 2KJF 1 REMARK LINK REVDAT 3 27-OCT-09 2KJF 1 JRNL REVDAT 2 01-SEP-09 2KJF 1 JRNL REVDAT 1 18-AUG-09 2KJF 0 JRNL AUTH L.A.MARTIN-VISSCHER,X.GONG,M.DUSZYK,J.C.VEDERAS JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF CARNOCYCLIN A REVEALS JRNL TITL 2 THAT MANY CIRCULAR BACTERIOCINS SHARE A COMMON STRUCTURAL JRNL TITL 3 MOTIF. JRNL REF J.BIOL.CHEM. V. 284 28674 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19692336 JRNL DOI 10.1074/JBC.M109.036459 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000101194. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 5.9 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 CARNOCYCLIN A, 20 MM SODIUM REMARK 210 PHOSPHATE, 1 MM EDTA, 1 MM REMARK 210 SODIUM AZIDE, 0.1 MM DSS, 90% REMARK 210 H2O/10% D2O; 1 MM [U-99% 13C; U- REMARK 210 99% 15N] CARNOCYCLIN A, 20 MM REMARK 210 SODIUM PHOSPHATE, 1 MM EDTA, 1 REMARK 210 MM SODIUM AZIDE, 0.1 MM DSS, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-15N TOCSY; 3D HNHA; REMARK 210 2D 1H-1H TOCSY; 2D 1H-1H COSY; REMARK 210 2D 1H-1H NOESY; 2D 1H-13C HSQC; REMARK 210 3D HCCH-TOCSY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N LEU A 1 O LEU A 60 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 36 99.94 -56.05 REMARK 500 1 GLN A 52 -72.85 -137.45 REMARK 500 2 GLN A 52 -71.01 -119.13 REMARK 500 3 GLN A 52 -68.59 -130.19 REMARK 500 4 GLN A 52 -67.79 -133.89 REMARK 500 5 GLN A 52 -69.85 -135.92 REMARK 500 6 VAL A 36 101.47 -53.16 REMARK 500 6 GLN A 52 -72.83 -122.12 REMARK 500 7 VAL A 36 100.75 -54.95 REMARK 500 7 GLN A 52 -73.43 -136.81 REMARK 500 8 GLN A 52 -74.35 -131.98 REMARK 500 9 VAL A 36 102.25 -51.21 REMARK 500 9 GLN A 52 -68.61 -124.08 REMARK 500 10 GLN A 52 -64.50 -134.42 REMARK 500 11 VAL A 36 98.79 -57.70 REMARK 500 11 GLN A 52 -74.63 -122.35 REMARK 500 12 GLN A 52 -63.89 -105.80 REMARK 500 13 VAL A 36 100.61 -55.04 REMARK 500 13 GLN A 52 -70.98 -108.17 REMARK 500 14 VAL A 36 77.26 53.11 REMARK 500 14 GLN A 52 -74.96 -100.59 REMARK 500 15 GLN A 52 -67.53 -122.13 REMARK 500 17 GLN A 52 -69.50 -123.70 REMARK 500 18 VAL A 36 100.45 -55.10 REMARK 500 18 GLN A 52 -71.39 -130.65 REMARK 500 19 GLN A 52 -67.63 -104.89 REMARK 500 20 GLN A 52 -70.33 -111.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 2KJF A 1 60 UNP B2MVM5 CCLA_CARML 5 64 SEQRES 1 A 60 LEU VAL ALA TYR GLY ILE ALA GLN GLY THR ALA GLU LYS SEQRES 2 A 60 VAL VAL SER LEU ILE ASN ALA GLY LEU THR VAL GLY SER SEQRES 3 A 60 ILE ILE SER ILE LEU GLY GLY VAL THR VAL GLY LEU SER SEQRES 4 A 60 GLY VAL PHE THR ALA VAL LYS ALA ALA ILE ALA LYS GLN SEQRES 5 A 60 GLY ILE LYS LYS ALA ILE GLN LEU HELIX 1 1 ALA A 7 ASN A 19 1 13 HELIX 2 2 THR A 23 GLY A 32 1 10 HELIX 3 3 LEU A 38 GLN A 52 1 15 HELIX 4 4 GLY A 53 LEU A 60 1 8 LINK N LEU A 1 C LEU A 60 1555 1555 1.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1