data_2KJH # _entry.id 2KJH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KJH pdb_00002kjh 10.2210/pdb2kjh/pdb RCSB RCSB101196 ? ? WWPDB D_1000101196 ? ? BMRB 16321 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 1wzv PDB 'Crystal structure of UbcH8' unspecified 1ubq PDB 'Crystal structure of Ubiquitin' unspecified 16321 BMRB 'NMR assignments for UbcH8' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KJH _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-28 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Serniwka, S.A.' 1 'Shaw, G.S.' 2 # _citation.id primary _citation.title 'The structure of the UbcH8-ubiquitin complex shows a unique ubiquitin interaction site.' _citation.journal_abbrev Biochemistry _citation.journal_volume 48 _citation.page_first 12169 _citation.page_last 12179 _citation.year 2009 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19928833 _citation.pdbx_database_id_DOI 10.1021/bi901686j # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serniwka, S.A.' 1 ? primary 'Shaw, G.S.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin/ISG15-conjugating enzyme E2 L6' 17659.484 1 6.3.2.19 ? ? ? 2 polymer man Ubiquitin 8622.922 1 ? G76C ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ubiquitin-protein ligase L6, Ubiquitin carrier protein L6, UbcH8, Retinoic acid-induced gene B protein, RIG-B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE NGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS ; ;MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE NGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS ; A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGC MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 MET n 1 5 ARG n 1 6 VAL n 1 7 VAL n 1 8 LYS n 1 9 GLU n 1 10 LEU n 1 11 GLU n 1 12 ASP n 1 13 LEU n 1 14 GLN n 1 15 LYS n 1 16 LYS n 1 17 PRO n 1 18 PRO n 1 19 PRO n 1 20 TYR n 1 21 LEU n 1 22 ARG n 1 23 ASN n 1 24 LEU n 1 25 SER n 1 26 SER n 1 27 ASP n 1 28 ASP n 1 29 ALA n 1 30 ASN n 1 31 VAL n 1 32 LEU n 1 33 VAL n 1 34 TRP n 1 35 HIS n 1 36 ALA n 1 37 LEU n 1 38 LEU n 1 39 LEU n 1 40 PRO n 1 41 ASP n 1 42 GLN n 1 43 PRO n 1 44 PRO n 1 45 TYR n 1 46 HIS n 1 47 LEU n 1 48 LYS n 1 49 ALA n 1 50 PHE n 1 51 ASN n 1 52 LEU n 1 53 ARG n 1 54 ILE n 1 55 SER n 1 56 PHE n 1 57 PRO n 1 58 PRO n 1 59 GLU n 1 60 TYR n 1 61 PRO n 1 62 PHE n 1 63 LYS n 1 64 PRO n 1 65 PRO n 1 66 MET n 1 67 ILE n 1 68 LYS n 1 69 PHE n 1 70 THR n 1 71 THR n 1 72 LYS n 1 73 ILE n 1 74 TYR n 1 75 HIS n 1 76 PRO n 1 77 ASN n 1 78 VAL n 1 79 ASP n 1 80 GLU n 1 81 ASN n 1 82 GLY n 1 83 GLN n 1 84 ILE n 1 85 CYS n 1 86 LEU n 1 87 PRO n 1 88 ILE n 1 89 ILE n 1 90 SER n 1 91 SER n 1 92 GLU n 1 93 ASN n 1 94 TRP n 1 95 LYS n 1 96 PRO n 1 97 CYS n 1 98 THR n 1 99 LYS n 1 100 THR n 1 101 CYS n 1 102 GLN n 1 103 VAL n 1 104 LEU n 1 105 GLU n 1 106 ALA n 1 107 LEU n 1 108 ASN n 1 109 VAL n 1 110 LEU n 1 111 VAL n 1 112 ASN n 1 113 ARG n 1 114 PRO n 1 115 ASN n 1 116 ILE n 1 117 ARG n 1 118 GLU n 1 119 PRO n 1 120 LEU n 1 121 ARG n 1 122 MET n 1 123 ASP n 1 124 LEU n 1 125 ALA n 1 126 ASP n 1 127 LEU n 1 128 LEU n 1 129 THR n 1 130 GLN n 1 131 ASN n 1 132 PRO n 1 133 GLU n 1 134 LEU n 1 135 PHE n 1 136 ARG n 1 137 LYS n 1 138 ASN n 1 139 ALA n 1 140 GLU n 1 141 GLU n 1 142 PHE n 1 143 THR n 1 144 LEU n 1 145 ARG n 1 146 PHE n 1 147 GLY n 1 148 VAL n 1 149 ASP n 1 150 ARG n 1 151 PRO n 1 152 SER n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'UBE2L6, UBCH8' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? p11 ? ? ? ? ? 2 1 sample ? ? ? Human ? 'RPS27A UBA80, UBCEP1, UBA52, UBB, UBC' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3)pLysS' ? ? ? ? ? ? ? ? pET3a ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP UB2L6_HUMAN O14933 1 ;MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE NGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS ; 1 ? 2 UNP UBIQ_HUMAN P62988 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2KJH A 1 ? 152 ? O14933 1 ? 152 ? 1 152 2 2 2KJH B 1 ? 76 ? P62988 1 ? 76 ? 1 76 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 2KJH _struct_ref_seq_dif.mon_id CYS _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 76 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P62988 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 76 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 76 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCACB' 1 3 1 '3D CBCA(CO)NH' 1 4 2 '2D 1H-15N HSQC' 1 5 2 '3D HNCACB' 1 6 2 '3D CBCA(CO)NH' 1 7 3 '2D 1H-15N HSQC with Cross Saturation' 1 8 4 '2D 1H-15N HSQC with Cross Saturation' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 250 _pdbx_nmr_exptl_sample_conditions.pH 7.4 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.35 mM [U-100% 13C; U-100% 15N] UbcH8-1, 0.35 mM Ubiquitin-2, 20 mM sodium phosphate-3, 1 mM EDTA-4, 250 mM sodium chloride-5, 50 mM Arginine-6, 50 mM Glutamic Acid-7, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;0.35 mM UbcH8-8, 0.35 mM [U-100% 13C; U-100% 15N] Ubiquitin-9, 20 mM sodium phosphate-10, 1 mM EDTA-11, 250 mM sodium chloride-12, 50 mM Arginine-13, 50 mM Glutamic Acid-14, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' ;0.35 mM [U-100% 15N; U-99% 2H] UbcH8-15, 0.35 mM Ubiquitin-16, 20 mM sodium phosphate-17, 1 mM EDTA-18, 250 mM sodium chloride-19, 50 mM Arginine-20, 50 mM Glutamic Acid-21, 90% H2O/10% D2O ; 3 '90% H2O/10% D2O' ;0.35 mM UbcH8-22, 0.35 mM [U-100% 15N; U-99% 2H] Ubiquitin-23, 20 mM sodium phosphate-24, 1 mM EDTA-25, 250 mM sodium chloride-26, 50 mM Arginine-27, 50 mM Glutamic Acid-28, 90% H2O/10% D2O ; 4 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 800 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2KJH _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ;Semi-rigid body docking using previously determined structures of UbcH8 and ubiquitin; calculated 1000 structures-200 low energy structures selected, Semi-flexible simulated annealing and refinement with explicit water ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'Structures with the lowest energy in the lowest energy cluster' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 16 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KJH _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KJH _pdbx_nmr_representative.selection_criteria 'closest to the mean structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VnmrJ 2.1 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.1 2 'Johnson, One Moon Scientific' 'chemical shift assignment' NMRView 5.2.2 3 'Johnson, One Moon Scientific' 'data analysis' NMRView 5.2.2 4 'Dominguez, Boelens, Bonvin' refinement HADDOCK 2.0 5 'Dominguez, Boelens, Bonvin' 'structure solution' HADDOCK 2.0 6 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.2 7 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;THESE MODELS WERE DETERMINED FROM DOCKING OF UBCH8 AND UBIQUITIN BASED ON CHEMICAL SHIFT PERTURBATION AND SATURATION TRANSFER EXPERIMENTS. AS THE STARTING STRUCTURES WERE X-RAY COORDINATES, NO SIDE CHAIN PROTONS ARE INCLUDED IN THE FINAL STRUCTURE FILE. ; _exptl.entry_id 2KJH _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KJH _struct.title 'NMR based structural model of the UBCH8-UBIQUITIN complex' _struct.pdbx_model_details 'closest to the mean structure, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KJH _struct_keywords.pdbx_keywords 'Ligase/protein binding' _struct_keywords.text ;Protein-protein interaction, HADDOCK model, E2 enzyme, ATP-binding, Ligase, Nucleotide-binding, Ubl conjugation pathway, Cytoplasm, Isopeptide bond, Nucleus, Ubl conjugation, Ligase-protein binding COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 2 ? GLN A 14 ? ALA A 2 GLN A 14 1 ? 13 HELX_P HELX_P2 2 PRO A 44 ? HIS A 46 ? PRO A 44 HIS A 46 5 ? 3 HELX_P HELX_P3 3 LEU A 86 ? SER A 90 ? LEU A 86 SER A 90 5 ? 5 HELX_P HELX_P4 4 LYS A 99 ? ARG A 113 ? LYS A 99 ARG A 113 1 ? 15 HELX_P HELX_P5 5 ARG A 121 ? THR A 129 ? ARG A 121 THR A 129 1 ? 9 HELX_P HELX_P6 6 ASN A 131 ? LEU A 144 ? ASN A 131 LEU A 144 1 ? 14 HELX_P HELX_P7 7 THR B 22 ? GLU B 34 ? THR B 22 GLU B 34 1 ? 13 HELX_P HELX_P8 8 PRO B 37 ? ASP B 39 ? PRO B 37 ASP B 39 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 85 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 76 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 85 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 76 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.576 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 1 -0.43 2 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 1 0.43 3 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 2 -0.08 4 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 2 0.41 5 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 3 0.01 6 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 3 0.06 7 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 4 -0.08 8 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 4 0.39 9 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 5 0.03 10 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 5 0.68 11 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 6 -0.18 12 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 6 0.25 13 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 7 -0.20 14 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 7 0.76 15 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 8 -0.02 16 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 8 0.61 17 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 9 -0.24 18 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 9 0.77 19 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 10 -0.08 20 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 10 0.38 21 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 11 0.13 22 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 11 0.65 23 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 12 0.52 24 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 12 0.53 25 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 13 0.42 26 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 13 0.25 27 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 14 0.02 28 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 14 0.51 29 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 15 0.11 30 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 15 0.50 31 PRO 43 A . ? PRO 43 A PRO 44 A ? PRO 44 A 16 -0.07 32 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 16 -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 21 ? ASP A 27 ? LEU A 21 ASP A 27 A 2 ASN A 30 ? LEU A 38 ? ASN A 30 LEU A 38 A 3 LYS A 48 ? SER A 55 ? LYS A 48 SER A 55 A 4 MET A 66 ? PHE A 69 ? MET A 66 PHE A 69 B 1 LEU A 21 ? ASP A 27 ? LEU A 21 ASP A 27 B 2 ASN A 30 ? LEU A 38 ? ASN A 30 LEU A 38 B 3 LYS A 48 ? SER A 55 ? LYS A 48 SER A 55 B 4 VAL A 148 ? ASP A 149 ? VAL A 148 ASP A 149 C 1 THR B 12 ? GLU B 16 ? THR B 12 GLU B 16 C 2 GLN B 2 ? THR B 7 ? GLN B 2 THR B 7 C 3 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 C 4 GLN B 41 ? PHE B 45 ? GLN B 41 PHE B 45 C 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 22 ? N ARG A 22 O LEU A 37 ? O LEU A 37 A 2 3 N LEU A 38 ? N LEU A 38 O PHE A 50 ? O PHE A 50 A 3 4 N ARG A 53 ? N ARG A 53 O LYS A 68 ? O LYS A 68 B 1 2 N ARG A 22 ? N ARG A 22 O LEU A 37 ? O LEU A 37 B 2 3 N LEU A 38 ? N LEU A 38 O PHE A 50 ? O PHE A 50 B 3 4 N ALA A 49 ? N ALA A 49 O VAL A 148 ? O VAL A 148 C 1 2 O LEU B 15 ? O LEU B 15 N ILE B 3 ? N ILE B 3 C 2 3 N PHE B 4 ? N PHE B 4 O LEU B 67 ? O LEU B 67 C 3 4 O HIS B 68 ? O HIS B 68 N ILE B 44 ? N ILE B 44 C 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # _atom_sites.entry_id 2KJH _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 CYS 97 97 97 CYS CYS A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 MET 122 122 122 MET MET A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 SER 152 152 ? ? ? A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 THR 7 7 7 THR THR B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 THR 9 9 9 THR THR B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 THR 12 12 12 THR THR B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 LEU 15 15 15 LEU LEU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 VAL 17 17 17 VAL VAL B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASP 21 21 21 ASP ASP B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 ASN 25 25 25 ASN ASN B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 LYS 29 29 29 LYS LYS B . n B 2 30 ILE 30 30 30 ILE ILE B . n B 2 31 GLN 31 31 31 GLN GLN B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 LYS 33 33 33 LYS LYS B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 PRO 37 37 37 PRO PRO B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ARG 42 42 42 ARG ARG B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLN 49 49 49 GLN GLN B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 LEU 56 56 56 LEU LEU B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 HIS 68 68 68 HIS HIS B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 ARG 72 72 72 ARG ARG B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 GLY 75 75 75 GLY GLY B . n B 2 76 CYS 76 76 76 CYS CYS B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-26 4 'Structure model' 1 3 2021-10-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' database_2 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id UbcH8-1 0.35 ? mM '[U-100% 13C; U-100% 15N]' 1 Ubiquitin-2 0.35 ? mM ? 1 'sodium phosphate-3' 20 ? mM ? 1 EDTA-4 1 ? mM ? 1 'sodium chloride-5' 250 ? mM ? 1 Arginine-6 50 ? mM ? 1 'Glutamic Acid-7' 50 ? mM ? 1 UbcH8-8 0.35 ? mM ? 2 Ubiquitin-9 0.35 ? mM '[U-100% 13C; U-100% 15N]' 2 'sodium phosphate-10' 20 ? mM ? 2 EDTA-11 1 ? mM ? 2 'sodium chloride-12' 250 ? mM ? 2 Arginine-13 50 ? mM ? 2 'Glutamic Acid-14' 50 ? mM ? 2 UbcH8-15 0.35 ? mM '[U-100% 15N; U-99% 2H]' 3 Ubiquitin-16 0.35 ? mM ? 3 'sodium phosphate-17' 20 ? mM ? 3 EDTA-18 1 ? mM ? 3 'sodium chloride-19' 250 ? mM ? 3 Arginine-20 50 ? mM ? 3 'Glutamic Acid-21' 50 ? mM ? 3 UbcH8-22 0.35 ? mM ? 4 Ubiquitin-23 0.35 ? mM '[U-100% 15N; U-99% 2H]' 4 'sodium phosphate-24' 20 ? mM ? 4 EDTA-25 1 ? mM ? 4 'sodium chloride-26' 250 ? mM ? 4 Arginine-27 50 ? mM ? 4 'Glutamic Acid-28' 50 ? mM ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 HZ1 B LYS 11 ? ? OE1 B GLU 34 ? ? 1.59 2 4 HZ1 A LYS 72 ? ? OE2 A GLU 80 ? ? 1.58 3 5 HG1 B THR 55 ? ? OD2 B ASP 58 ? ? 1.58 4 6 OE2 A GLU 59 ? ? HZ1 A LYS 63 ? ? 1.60 5 7 OD2 B ASP 21 ? ? HZ2 B LYS 29 ? ? 1.54 6 7 HH21 A ARG 121 ? ? OD2 A ASP 123 ? ? 1.59 7 7 HZ3 B LYS 11 ? ? OE2 B GLU 34 ? ? 1.59 8 8 OD2 B ASP 21 ? ? HZ3 B LYS 29 ? ? 1.59 9 8 HZ2 B LYS 63 ? ? OE2 B GLU 64 ? ? 1.60 10 8 HZ3 B LYS 11 ? ? OE1 B GLU 34 ? ? 1.60 11 9 HZ2 B LYS 63 ? ? OE2 B GLU 64 ? ? 1.55 12 9 HZ2 A LYS 8 ? ? OD2 A ASP 12 ? ? 1.57 13 9 HZ3 A LYS 72 ? ? OE1 A GLU 80 ? ? 1.59 14 9 HG1 B THR 55 ? ? OD2 B ASP 58 ? ? 1.59 15 9 HZ2 B LYS 33 ? ? OE2 B GLU 34 ? ? 1.60 16 10 HZ2 B LYS 11 ? ? OE2 B GLU 34 ? ? 1.55 17 10 OD2 B ASP 21 ? ? HZ2 B LYS 29 ? ? 1.59 18 10 HZ1 B LYS 63 ? ? OE1 B GLU 64 ? ? 1.60 19 11 OE1 A GLU 59 ? ? HZ2 A LYS 63 ? ? 1.56 20 12 HZ2 A LYS 72 ? ? OE1 A GLU 80 ? ? 1.57 21 13 HZ3 B LYS 11 ? ? OE1 B GLU 34 ? ? 1.56 22 13 HG1 B THR 55 ? ? OD2 B ASP 58 ? ? 1.59 23 14 OE1 A GLU 9 ? ? HZ1 A LYS 99 ? ? 1.56 24 14 OE1 A GLU 11 ? ? HZ1 A LYS 15 ? ? 1.59 25 14 OD2 B ASP 21 ? ? HZ2 B LYS 29 ? ? 1.59 26 15 HZ3 B LYS 11 ? ? OE1 B GLU 34 ? ? 1.56 27 15 OD2 A ASP 12 ? ? HZ2 A LYS 99 ? ? 1.57 28 15 H3 B MET 1 ? ? OE2 B GLU 16 ? ? 1.58 29 15 H1 B MET 1 ? ? OE2 B GLU 18 ? ? 1.58 30 16 HZ1 B LYS 27 ? ? OD1 B ASP 52 ? ? 1.57 31 16 HZ3 B LYS 63 ? ? OE1 B GLU 64 ? ? 1.59 32 16 HZ3 A LYS 48 ? ? OD1 A ASP 149 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 145 ? ? -120.37 -52.72 2 1 ARG B 74 ? ? -100.40 77.29 3 2 ARG A 145 ? ? -132.70 -45.19 4 3 ASN A 23 ? ? 56.88 74.69 5 3 ARG A 145 ? ? -127.14 -56.90 6 3 GLU B 34 ? ? -87.49 -75.37 7 4 ASN A 93 ? ? -153.63 41.30 8 4 ALA B 46 ? ? 58.04 19.17 9 5 GLU B 34 ? ? -87.28 -74.14 10 5 GLN B 62 ? ? -106.17 -165.57 11 6 ASN A 93 ? ? -142.66 39.68 12 6 GLU A 118 ? ? -119.25 74.84 13 6 ARG A 145 ? ? -122.23 -50.80 14 7 LYS A 16 ? ? -154.47 83.69 15 7 ARG A 145 ? ? -136.68 -39.78 16 7 GLU B 64 ? ? 72.85 -7.41 17 8 ARG A 145 ? ? -122.04 -56.07 18 8 GLU B 34 ? ? -96.32 -62.91 19 9 SER A 91 ? ? -65.95 0.53 20 9 ARG A 145 ? ? -130.56 -41.94 21 9 GLN B 62 ? ? -114.42 -165.70 22 10 ASN A 93 ? ? -149.13 53.21 23 10 GLN B 62 ? ? -108.86 -169.43 24 11 ASN A 93 ? ? -163.59 103.15 25 14 ASN A 93 ? ? -165.80 47.21 26 15 SER A 91 ? ? -69.87 0.22 27 15 GLN B 62 ? ? -118.18 -169.99 28 15 ARG B 74 ? ? -99.74 32.20 29 16 SER A 91 ? ? -80.08 32.79 30 16 GLU A 92 ? ? -140.64 -56.73 31 16 GLN B 62 ? ? -105.40 -165.60 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 152 ? A SER 152 3 2 Y 1 A MET 1 ? A MET 1 4 2 Y 1 A SER 152 ? A SER 152 5 3 Y 1 A MET 1 ? A MET 1 6 3 Y 1 A SER 152 ? A SER 152 7 4 Y 1 A MET 1 ? A MET 1 8 4 Y 1 A SER 152 ? A SER 152 9 5 Y 1 A MET 1 ? A MET 1 10 5 Y 1 A SER 152 ? A SER 152 11 6 Y 1 A MET 1 ? A MET 1 12 6 Y 1 A SER 152 ? A SER 152 13 7 Y 1 A MET 1 ? A MET 1 14 7 Y 1 A SER 152 ? A SER 152 15 8 Y 1 A MET 1 ? A MET 1 16 8 Y 1 A SER 152 ? A SER 152 17 9 Y 1 A MET 1 ? A MET 1 18 9 Y 1 A SER 152 ? A SER 152 19 10 Y 1 A MET 1 ? A MET 1 20 10 Y 1 A SER 152 ? A SER 152 21 11 Y 1 A MET 1 ? A MET 1 22 11 Y 1 A SER 152 ? A SER 152 23 12 Y 1 A MET 1 ? A MET 1 24 12 Y 1 A SER 152 ? A SER 152 25 13 Y 1 A MET 1 ? A MET 1 26 13 Y 1 A SER 152 ? A SER 152 27 14 Y 1 A MET 1 ? A MET 1 28 14 Y 1 A SER 152 ? A SER 152 29 15 Y 1 A MET 1 ? A MET 1 30 15 Y 1 A SER 152 ? A SER 152 31 16 Y 1 A MET 1 ? A MET 1 32 16 Y 1 A SER 152 ? A SER 152 #