HEADER RNA BINDING PROTEIN 03-JUN-09 2KJM TITLE SOLUTION STRUCTURE OF SLBP RNA BINDING DOMAIN FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE RNA HAIRPIN-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 129-158; COMPND 5 SYNONYM: HISTONE STEM-LOOP-BINDING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLBP, HBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS RNA BINDING PROTEIN, SLBP, HISTONE MRNA, STEM-LOOP BINDING PROTEIN, KEYWDS 2 HAIRPIN BINDING PROTEIN, MRNA PROCESSING, NUCLEUS, PHOSPHOPROTEIN, KEYWDS 3 RNA-BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.THAPAR REVDAT 3 01-MAY-24 2KJM 1 REMARK REVDAT 2 30-JAN-13 2KJM 1 JRNL VERSN REVDAT 1 09-JUN-10 2KJM 0 JRNL AUTH M.ZHANG,T.T.LAM,M.TONELLI,W.F.MARZLUFF,R.THAPAR JRNL TITL INTERACTION OF THE HISTONE MRNA HAIRPIN WITH STEM-LOOP JRNL TITL 2 BINDING PROTEIN (SLBP) AND REGULATION OF THE SLBP-RNA JRNL TITL 3 COMPLEX BY PHOSPHORYLATION AND PROLINE ISOMERIZATION. JRNL REF BIOCHEMISTRY V. 51 3215 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22439849 JRNL DOI 10.1021/BI2018255 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : FELIX, FELIX REMARK 3 AUTHORS : ACCELRYS SOFTWARE INC. (FELIX), ACCELRYS SOFTWARE REMARK 3 INC. (FELIX) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KJM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000101201. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 0.050 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1-7 MM SLBP30MER-1, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D DQF-COSY; 2D 1H-1H NOESY; 2D REMARK 210 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 4 -74.87 -74.25 REMARK 500 2 THR A 2 170.72 -58.52 REMARK 500 2 GLU A 4 -75.03 -126.81 REMARK 500 3 ASP A 3 138.23 -174.12 REMARK 500 3 GLU A 4 -74.43 -77.07 REMARK 500 3 SER A 5 -40.83 -29.73 REMARK 500 4 ASP A 3 115.63 -176.93 REMARK 500 4 GLU A 4 -74.87 -71.49 REMARK 500 5 GLU A 4 -71.25 -54.68 REMARK 500 6 GLU A 4 -73.96 -117.16 REMARK 500 7 GLU A 4 -75.40 -63.54 REMARK 500 8 GLU A 4 -75.16 -96.04 REMARK 500 9 GLU A 4 -74.37 -67.17 REMARK 500 10 GLU A 4 -74.70 -90.89 REMARK 500 11 GLU A 4 -72.02 -117.03 REMARK 500 12 GLU A 4 -75.45 -87.08 REMARK 500 12 SER A 5 -39.29 -31.09 REMARK 500 13 ASP A 3 136.22 -175.72 REMARK 500 14 ASP A 3 138.94 -175.55 REMARK 500 14 GLU A 4 -63.56 -128.21 REMARK 500 15 THR A 2 -179.86 -59.56 REMARK 500 15 GLU A 4 -74.35 -58.55 REMARK 500 16 ASP A 3 137.31 -173.26 REMARK 500 16 GLU A 4 -71.71 -86.79 REMARK 500 16 SER A 5 -39.93 -31.18 REMARK 500 17 GLU A 4 -73.47 -83.57 REMARK 500 18 ASP A 3 109.33 -171.83 REMARK 500 19 THR A 2 29.66 -151.71 REMARK 500 20 GLU A 4 -75.17 -109.98 REMARK 500 REMARK 500 REMARK: NULL DBREF 2KJM A 1 30 UNP Q14493 SLBP_HUMAN 129 158 SEQRES 1 A 30 GLU THR ASP GLU SER VAL LEU MET ARG ARG GLN LYS GLN SEQRES 2 A 30 ILE ASN TYR GLY LYS ASN THR ILE ALA TYR ASP ARG TYR SEQRES 3 A 30 ILE LYS GLU VAL HELIX 1 1 ASP A 3 LYS A 12 1 10 HELIX 2 2 ASN A 19 ALA A 22 5 4 HELIX 3 3 TYR A 23 GLU A 29 1 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1