HEADER BIOSYNTHETIC PROTEIN 08-JUN-09 2KJS OBSLTE 06-APR-11 2KJS 2KWM TITLE SOLUTION NMR STRUCTURE OF HOLO ACYL CARRIER PROTEIN FROM GEOBACTER TITLE 2 METALLIREDUCENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TITLE 3 GMR141 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ACYL CARRIER PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER METALLIREDUCENS GS-15; SOURCE 3 ORGANISM_TAXID: 269799; SOURCE 4 ATCC: 53774; SOURCE 5 GENE: GMET_2339; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET21-23C KEYWDS ALPHA, ACP, PNS, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, KEYWDS 3 BIOSYNTHETIC PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.J.SMOLA,T.A.RAMELOT,L.ZHAO,K.HAMILTON,E.L.FOOTE,R.XIAO,R.NAIR, AUTHOR 2 J.K.EVERETT,G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,M.A.KENNEDY, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 2 06-APR-11 2KJS 1 OBSLTE REVDAT 1 23-JUN-09 2KJS 0 SPRSDE 23-JUN-09 2KJS 2KCI JRNL AUTH M.J.SMOLA,T.A.RAMELOT,L.ZHAO,K.HAMILTON,E.L.FOOTE,R.XIAO, JRNL AUTH 2 R.NAIR,J.K.EVERETT,G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE, JRNL AUTH 3 M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF HOLO ACYL CARRIER PROTEIN FROM JRNL TITL 2 GEOBACTER METALLIREDUCENS. NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET GMR141 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR_NIH 2.20 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NIH-XPLOR-2.20 REFINEMENT WITH HYDROGEN REMARK 3 BOND PMF, (NOT RADIUS OF GYRATION), ETC. REMARK 4 REMARK 4 2KJS COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-09. REMARK 100 THE RCSB ID CODE IS RCSB101207. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 273 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM MES, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM CALCIUM CHLORIDE, REMARK 210 100 MM DTT, 0.02 % SODIUM AZIDE, REMARK 210 0.74 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 95% H2O/5% D2O; 20 MM REMARK 210 MES, 100 MM SODIUM CHLORIDE, 5 MM REMARK 210 CALCIUM CHLORIDE, 100 MM DTT, REMARK 210 0.02 % SODIUM AZIDE, 0.74 MM [U- REMARK 210 100% 13C; U-100% 15N] PROTEIN, REMARK 210 100% D2O; 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 100 MM DTT, 0.02 % REMARK 210 SODIUM AZIDE, 0.83 MM [U-5% 13C; REMARK 210 U-100% 15N] PROTEIN, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 4D 1H-13C NOESY; 3D HNCO; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 3D C(CO) REMARK 210 NH; 3D HBHA(CO)NH; 3D HCCH-TOCSY; REMARK 210 3D HCCH-COSY; 3D H(CCO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCEIII REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE LINUX9, VNMR 6.1C, REMARK 210 TOPSPIN 2.1, AUTOSTRUCTURE 2.2.1, REMARK 210 X-PLOR_NIH 2.20, SPARKY 3.113, REMARK 210 PSVS 1.3, AUTOASSIGN 2.3.0, REMARK 210 PDBSTAT 5.0, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 25 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 3 H LEU A 4 1.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 3 -70.24 -99.76 REMARK 500 1 SER A 19 86.00 -163.24 REMARK 500 1 TRP A 34 73.07 -151.69 REMARK 500 1 LYS A 63 -42.38 -147.10 REMARK 500 2 THR A 3 -69.93 -101.90 REMARK 500 2 ASP A 16 20.98 42.92 REMARK 500 2 SER A 19 81.82 -158.58 REMARK 500 2 VAL A 21 116.82 56.28 REMARK 500 2 SER A 27 49.66 -145.87 REMARK 500 2 ALA A 28 78.74 43.75 REMARK 500 2 ASN A 29 -31.90 -169.90 REMARK 500 2 ALA A 33 35.38 -78.14 REMARK 500 2 LYS A 63 -37.47 -132.94 REMARK 500 2 HIS A 82 98.96 -41.26 REMARK 500 2 HIS A 83 -49.15 -153.42 REMARK 500 2 HIS A 85 9.16 50.97 REMARK 500 3 THR A 3 -69.38 -100.73 REMARK 500 3 SER A 27 136.71 65.57 REMARK 500 3 TRP A 34 76.42 -151.93 REMARK 500 3 GLU A 81 -70.54 -98.75 REMARK 500 4 PRO A 2 107.64 -57.05 REMARK 500 4 THR A 3 -71.99 -103.11 REMARK 500 4 ASP A 16 66.51 -61.88 REMARK 500 4 ASP A 18 -94.03 49.56 REMARK 500 4 TRP A 34 80.92 -151.85 REMARK 500 4 LYS A 63 -37.98 -139.22 REMARK 500 4 HIS A 82 -100.28 46.13 REMARK 500 4 HIS A 83 104.14 -166.61 REMARK 500 5 THR A 3 -69.13 -100.79 REMARK 500 5 ASP A 16 17.67 50.34 REMARK 500 5 ASP A 18 -121.68 -81.40 REMARK 500 5 SER A 19 -42.11 69.58 REMARK 500 5 LEU A 22 115.02 55.93 REMARK 500 5 ALA A 33 14.41 -69.69 REMARK 500 5 HIS A 49 -76.12 -54.19 REMARK 500 5 ASN A 64 178.75 70.39 REMARK 500 5 HIS A 82 -167.83 41.61 REMARK 500 5 HIS A 83 -60.54 -169.98 REMARK 500 5 HIS A 85 166.07 57.03 REMARK 500 6 THR A 3 -68.13 -101.45 REMARK 500 6 PHE A 15 39.14 -82.83 REMARK 500 6 ASP A 16 -75.07 67.19 REMARK 500 6 ASP A 17 -18.86 164.83 REMARK 500 6 ASP A 18 142.02 -39.16 REMARK 500 6 SER A 19 87.30 -42.94 REMARK 500 6 ALA A 33 72.01 -62.03 REMARK 500 6 TRP A 34 80.70 -151.13 REMARK 500 6 LYS A 63 -34.12 -145.44 REMARK 500 6 GLU A 81 75.76 -154.53 REMARK 500 6 HIS A 84 149.51 57.77 REMARK 500 REMARK 500 THIS ENTRY HAS 169 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1 PNS A 999 REMARK 610 2 PNS A 999 REMARK 610 3 PNS A 999 REMARK 610 4 PNS A 999 REMARK 610 5 PNS A 999 REMARK 610 6 PNS A 999 REMARK 610 7 PNS A 999 REMARK 610 8 PNS A 999 REMARK 610 9 PNS A 999 REMARK 610 10 PNS A 999 REMARK 610 11 PNS A 999 REMARK 610 12 PNS A 999 REMARK 610 13 PNS A 999 REMARK 610 14 PNS A 999 REMARK 610 15 PNS A 999 REMARK 610 16 PNS A 999 REMARK 610 17 PNS A 999 REMARK 610 18 PNS A 999 REMARK 610 19 PNS A 999 REMARK 610 20 PNS A 999 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PNS A 999 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GMR141 RELATED DB: TARGETDB REMARK 900 RELATED ID: 16081 RELATED DB: BMRB DBREF 2KJS A 1 79 UNP Q39T60 Q39T60_GEOMG 1 79 SEQADV 2KJS LEU A 80 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS GLU A 81 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 82 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 83 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 84 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 85 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 86 UNP Q39T60 EXPRESSION TAG SEQADV 2KJS HIS A 87 UNP Q39T60 EXPRESSION TAG SEQRES 1 A 87 MET PRO THR LEU ASP ALA LEU THR PRO ILE PHE ARG GLN SEQRES 2 A 87 VAL PHE ASP ASP ASP SER ILE VAL LEU THR ARG GLU THR SEQRES 3 A 87 SER ALA ASN ASP ILE ASP ALA TRP ASP SER LEU SER HIS SEQRES 4 A 87 MET ASN LEU ILE VAL SER LEU GLU VAL HIS TYR LYS ILE SEQRES 5 A 87 LYS PHE ALA LEU GLY GLU LEU GLN LYS LEU LYS ASN VAL SEQRES 6 A 87 GLY ASP LEU ALA ASP LEU VAL ASP LYS LYS LEU ALA ARG SEQRES 7 A 87 LYS LEU GLU HIS HIS HIS HIS HIS HIS HET PNS A 999 21 HETNAM PNS 4'-PHOSPHOPANTETHEINE FORMUL 2 PNS C11 H23 N2 O7 P S HELIX 1 1 THR A 3 ASP A 16 1 14 HELIX 2 2 ASP A 35 LYS A 51 1 17 HELIX 3 3 ALA A 55 GLN A 60 1 6 HELIX 4 4 ASN A 64 HIS A 82 1 19 LINK OG SER A 36 P24 PNS A 999 1555 1555 1.61 SITE 1 AC1 5 TRP A 34 SER A 36 HIS A 39 LEU A 62 SITE 2 AC1 5 LYS A 63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1