data_2KJX # _entry.id 2KJX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KJX RCSB RCSB101212 BMRB 16331 WWPDB D_1000101212 # _pdbx_database_related.db_id 16331 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KJX _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-06-10 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rousseau, F.' 1 'Lingel, A.' 2 'Pan, B.' 3 'Fairbrother, W.J.' 4 'Bazan, F.' 5 # _citation.id primary _citation.title 'The structure of the extracellular domain of the jumping translocation breakpoint protein reveals a variation of the midkine fold.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 415 _citation.page_first 22 _citation.page_last 28 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22079049 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.10.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Rousseau, F.' 1 primary 'Pan, B.' 2 primary 'Fairbrother, W.J.' 3 primary 'Bazan, J.F.' 4 primary 'Lingel, A.' 5 # _cell.entry_id 2KJX _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2KJX _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Jumping translocation breakpoint protein' _entity.formula_weight 7297.307 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'extracellular domain (UNP residues 47-104)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein JTB, Prostate androgen-regulated protein, PAR protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSGMKEFPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALMEQR _entity_poly.pdbx_seq_one_letter_code_can GSGMKEFPCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALMEQR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 MET n 1 5 LYS n 1 6 GLU n 1 7 PHE n 1 8 PRO n 1 9 CYS n 1 10 TRP n 1 11 LEU n 1 12 VAL n 1 13 GLU n 1 14 GLU n 1 15 PHE n 1 16 VAL n 1 17 VAL n 1 18 ALA n 1 19 GLU n 1 20 GLU n 1 21 CYS n 1 22 SER n 1 23 PRO n 1 24 CYS n 1 25 SER n 1 26 ASN n 1 27 PHE n 1 28 ARG n 1 29 ALA n 1 30 LYS n 1 31 THR n 1 32 THR n 1 33 PRO n 1 34 GLU n 1 35 CYS n 1 36 GLY n 1 37 PRO n 1 38 THR n 1 39 GLY n 1 40 TYR n 1 41 VAL n 1 42 GLU n 1 43 LYS n 1 44 ILE n 1 45 THR n 1 46 CYS n 1 47 SER n 1 48 SER n 1 49 SER n 1 50 LYS n 1 51 ARG n 1 52 ASN n 1 53 GLU n 1 54 PHE n 1 55 LYS n 1 56 SER n 1 57 CYS n 1 58 ARG n 1 59 SER n 1 60 ALA n 1 61 LEU n 1 62 MET n 1 63 GLU n 1 64 GLN n 1 65 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene JTB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code JTB_HUMAN _struct_ref.pdbx_db_accession O76095 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PCWLVEEFVVAEECSPCSNFRAKTTPECGPTGYVEKITCSSSKRNEFKSCRSALMEQR _struct_ref.pdbx_align_begin 47 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KJX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 65 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O76095 _struct_ref_seq.db_align_beg 47 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 104 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 65 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KJX GLY A 1 ? UNP O76095 ? ? 'EXPRESSION TAG' 1 1 1 2KJX SER A 2 ? UNP O76095 ? ? 'EXPRESSION TAG' 2 2 1 2KJX GLY A 3 ? UNP O76095 ? ? 'EXPRESSION TAG' 3 3 1 2KJX MET A 4 ? UNP O76095 ? ? 'EXPRESSION TAG' 4 4 1 2KJX LYS A 5 ? UNP O76095 ? ? 'EXPRESSION TAG' 5 5 1 2KJX GLU A 6 ? UNP O76095 ? ? 'EXPRESSION TAG' 6 6 1 2KJX PHE A 7 ? UNP O76095 ? ? 'EXPRESSION TAG' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 2 '2D 1H-13C HSQC' 1 3 3 '2D 1H-1H NOESY' 1 4 2 '3D HNCA' 1 5 2 '3D CBCA(CO)NH' 1 6 2 '3D HNCACB' 1 7 2 '3D HNHA' 1 8 2 '3D HNHB' 1 9 2 '3D H(CCO)NH' 1 10 2 '3D C(CO)NH' 1 11 2 '3D HCCH-TOCSY' 1 12 2 '3D 1H-15N NOESY' 1 13 2 '3D 1H-13C NOESY' 1 14 2 '3D HBHA(CO)NH' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 5.6 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 15N] JTB, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 13C; U-100% 15N] JTB, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '1 mM JTB, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 100% D2O' 3 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker DRX 1 'Bruker DRX' 800 Bruker DRX 2 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2KJX _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;Distance restraints were derived from 15N- or 13C-resolved 3D NOESY experiments and a 2D homonuclear 1H NOESY experiment. Restraints for the backbone angles phi and psi were derived from 3J(HN,Ha) coupling constants and TALOS. Stereospecific assignments of Leu, Val methyl groups were obtained using a 10% fractionally 13C-labeled sample. For the definition of H-bonds, slowly exchanging amide protons were identified from 1H, 15N correlation experiments after redissolving lyophilized protein in D2O. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KJX _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KJX _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Bruker collection TOPSPIN ? 1 CCPN 'data analysis' CCPN ? 2 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS ? 3 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS ? 4 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KJX _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KJX _struct.title 'Solution structure of the extracellular domain of JTB' _struct.pdbx_descriptor 'Jumping translocation breakpoint protein' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KJX _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'cysteine-rich domain, Membrane, Transmembrane, MEMBRANE PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 26 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 31 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 26 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 31 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 9 A CYS 46 1_555 ? ? ? ? ? ? ? 2.030 ? disulf2 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 21 A CYS 57 1_555 ? ? ? ? ? ? ? 2.029 ? disulf3 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 35 SG ? ? A CYS 24 A CYS 35 1_555 ? ? ? ? ? ? ? 2.029 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 15 ? PRO A 23 ? PHE A 15 PRO A 23 A 2 TYR A 40 ? CYS A 46 ? TYR A 40 CYS A 46 A 3 ARG A 51 ? SER A 56 ? ARG A 51 SER A 56 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 19 ? N GLU A 19 O LYS A 43 ? O LYS A 43 A 2 3 N ILE A 44 ? N ILE A 44 O GLU A 53 ? O GLU A 53 # _atom_sites.entry_id 2KJX _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 ARG 65 65 65 ARG ARG A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-23 4 'Structure model' 1 3 2012-04-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR ; # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id JTB-1 1 ? mM '[U-100% 15N]' 1 'sodium phosphate-2' 50 ? mM ? 1 'sodium chloride-3' 150 ? mM ? 1 'sodium azide-4' 0.1 ? mM ? 1 JTB-5 1 ? mM '[U-100% 13C; U-100% 15N]' 2 'sodium phosphate-6' 50 ? mM ? 2 'sodium chloride-7' 150 ? mM ? 2 'sodium azide-8' 0.1 ? mM ? 2 JTB-9 1 ? mM ? 3 'sodium phosphate-10' 50 ? mM ? 3 'sodium chloride-11' 150 ? mM ? 3 'sodium azide-12' 0.1 ? mM ? 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 17 ? ? -58.97 93.66 2 1 GLU A 20 ? ? -48.88 156.12 3 1 PRO A 23 ? ? -46.54 157.81 4 1 SER A 25 ? ? -54.03 -177.67 5 1 LYS A 50 ? ? 42.47 73.83 6 1 GLU A 63 ? ? -150.56 89.91 7 2 VAL A 17 ? ? -58.84 93.73 8 2 GLU A 20 ? ? -48.81 158.17 9 2 PRO A 23 ? ? -49.07 159.65 10 2 SER A 25 ? ? -57.31 -169.45 11 2 PRO A 37 ? ? -76.99 -78.72 12 2 LYS A 50 ? ? 42.25 73.83 13 2 GLU A 63 ? ? -154.98 89.88 14 3 GLU A 6 ? ? -174.85 139.95 15 3 VAL A 17 ? ? -58.96 93.80 16 3 GLU A 20 ? ? -48.88 152.70 17 3 PRO A 23 ? ? -47.27 158.30 18 3 SER A 25 ? ? -57.97 -175.35 19 3 LYS A 50 ? ? 42.18 73.94 20 4 SER A 2 ? ? -160.53 -74.60 21 4 VAL A 17 ? ? -58.96 93.67 22 4 GLU A 20 ? ? -48.74 160.64 23 4 PRO A 23 ? ? -44.06 160.17 24 4 SER A 25 ? ? -57.09 -173.22 25 4 SER A 49 ? ? 80.34 8.44 26 4 LYS A 50 ? ? 42.24 73.88 27 4 GLU A 63 ? ? -154.91 89.94 28 5 VAL A 17 ? ? -58.92 94.01 29 5 GLU A 20 ? ? -48.88 169.79 30 5 PRO A 23 ? ? -45.11 158.70 31 5 SER A 25 ? ? -60.52 -167.16 32 5 LYS A 30 ? ? -92.11 -63.02 33 5 GLU A 34 ? ? -89.83 32.62 34 5 PRO A 37 ? ? -76.17 -83.40 35 5 SER A 49 ? ? 105.28 -13.11 36 5 LYS A 50 ? ? 48.66 74.05 37 6 SER A 2 ? ? -168.60 105.67 38 6 VAL A 17 ? ? -58.94 93.56 39 6 GLU A 20 ? ? -48.72 163.72 40 6 PRO A 23 ? ? -46.08 160.84 41 6 SER A 25 ? ? -54.60 -175.46 42 6 SER A 49 ? ? 80.08 8.48 43 6 LYS A 50 ? ? 42.25 73.79 44 6 GLU A 63 ? ? -153.78 89.99 45 7 VAL A 17 ? ? -58.81 93.95 46 7 GLU A 20 ? ? -48.80 170.46 47 7 PRO A 23 ? ? -47.29 161.23 48 7 SER A 25 ? ? -62.59 -173.92 49 7 LYS A 30 ? ? -92.32 -63.15 50 7 GLU A 34 ? ? -89.19 40.59 51 7 LYS A 50 ? ? 41.51 73.74 52 7 GLU A 63 ? ? -155.03 89.90 53 8 SER A 2 ? ? -176.58 99.33 54 8 VAL A 17 ? ? -58.85 93.79 55 8 GLU A 20 ? ? -48.59 162.39 56 8 PRO A 23 ? ? -44.79 160.62 57 8 SER A 25 ? ? -57.34 -175.65 58 8 SER A 49 ? ? 80.05 7.60 59 8 LYS A 50 ? ? 43.69 73.88 60 8 CYS A 57 ? ? -129.72 -169.65 61 8 GLU A 63 ? ? -154.96 89.85 62 9 VAL A 17 ? ? -58.88 93.61 63 9 GLU A 20 ? ? -48.77 159.99 64 9 PRO A 23 ? ? -47.05 158.23 65 9 SER A 25 ? ? -57.41 -170.46 66 9 LYS A 50 ? ? 42.32 73.82 67 10 VAL A 17 ? ? -58.87 93.61 68 10 GLU A 20 ? ? -48.67 165.06 69 10 PRO A 23 ? ? -47.59 159.93 70 10 SER A 25 ? ? -55.86 -173.40 71 10 GLU A 34 ? ? -93.27 35.07 72 10 PRO A 37 ? ? -76.94 -82.03 73 10 SER A 49 ? ? 108.13 -15.64 74 10 LYS A 50 ? ? 49.42 74.25 75 10 GLU A 63 ? ? -151.16 89.91 76 11 SER A 2 ? ? 60.63 -178.35 77 11 VAL A 12 ? ? -160.93 30.55 78 11 VAL A 17 ? ? -62.72 93.65 79 11 PRO A 23 ? ? -46.46 158.16 80 11 SER A 25 ? ? -57.75 -173.59 81 11 GLU A 34 ? ? -89.89 40.10 82 11 PRO A 37 ? ? -76.35 -88.27 83 11 LYS A 50 ? ? 44.51 74.43 84 12 VAL A 12 ? ? -161.06 32.25 85 12 VAL A 17 ? ? -63.38 93.54 86 12 GLU A 20 ? ? -48.66 161.07 87 12 PRO A 23 ? ? -45.55 160.92 88 12 SER A 25 ? ? -57.03 -175.33 89 12 GLU A 34 ? ? -90.03 39.93 90 12 LYS A 50 ? ? 44.68 74.19 91 12 GLU A 63 ? ? -155.01 89.88 92 13 SER A 2 ? ? -107.16 -66.99 93 13 VAL A 17 ? ? -58.90 93.63 94 13 GLU A 20 ? ? -48.72 161.13 95 13 PRO A 23 ? ? -43.38 156.58 96 13 SER A 25 ? ? -55.11 -175.74 97 13 CYS A 35 ? ? -94.68 30.01 98 13 LYS A 50 ? ? 41.69 73.94 99 13 GLU A 63 ? ? -155.09 89.88 100 14 VAL A 17 ? ? -59.00 93.85 101 14 GLU A 20 ? ? -48.68 169.88 102 14 PRO A 23 ? ? -46.11 157.78 103 14 SER A 25 ? ? -56.38 -168.27 104 14 GLU A 34 ? ? -83.92 47.18 105 14 CYS A 35 ? ? -141.11 19.37 106 14 LYS A 50 ? ? 40.86 73.36 107 15 SER A 2 ? ? 60.35 109.05 108 15 VAL A 17 ? ? -61.39 93.56 109 15 GLU A 20 ? ? -48.67 159.90 110 15 PRO A 23 ? ? -47.01 159.01 111 15 SER A 25 ? ? -59.94 -176.63 112 15 GLU A 34 ? ? -93.13 33.95 113 15 PRO A 37 ? ? -77.26 -85.60 114 15 LYS A 50 ? ? 40.67 73.38 115 15 GLU A 63 ? ? -152.12 89.75 116 16 VAL A 17 ? ? -59.00 93.78 117 16 GLU A 20 ? ? -48.69 169.43 118 16 PRO A 23 ? ? -43.01 157.32 119 16 SER A 25 ? ? -56.45 -171.69 120 16 GLU A 34 ? ? -90.81 39.65 121 16 SER A 49 ? ? 109.48 -17.03 122 16 LYS A 50 ? ? 48.54 74.23 123 16 GLU A 63 ? ? -150.34 89.97 124 17 VAL A 17 ? ? -58.91 93.51 125 17 GLU A 20 ? ? -48.80 167.19 126 17 PRO A 23 ? ? -49.30 160.89 127 17 SER A 25 ? ? -65.90 -167.55 128 17 PRO A 37 ? ? -76.82 -78.07 129 17 SER A 49 ? ? 80.12 8.36 130 17 LYS A 50 ? ? 42.40 73.88 131 17 GLU A 63 ? ? -155.19 89.83 132 18 VAL A 17 ? ? -60.00 93.70 133 18 GLU A 20 ? ? -48.68 168.06 134 18 PRO A 23 ? ? -48.69 161.21 135 18 SER A 25 ? ? -56.59 -169.92 136 18 GLU A 34 ? ? -91.06 39.45 137 18 PRO A 37 ? ? -76.13 -86.67 138 18 LYS A 50 ? ? 43.20 74.04 139 19 SER A 2 ? ? 60.69 111.01 140 19 VAL A 17 ? ? -59.01 93.52 141 19 GLU A 20 ? ? -48.67 161.78 142 19 PRO A 23 ? ? -45.94 159.30 143 19 SER A 25 ? ? -52.80 176.50 144 19 LYS A 50 ? ? 53.73 73.75 145 20 SER A 2 ? ? -138.80 -47.41 146 20 VAL A 17 ? ? -58.88 93.64 147 20 GLU A 20 ? ? -48.75 162.96 148 20 SER A 25 ? ? -58.36 -175.41 149 20 GLU A 34 ? ? -92.60 37.64 150 20 PRO A 37 ? ? -77.88 -87.98 151 20 SER A 49 ? ? 106.87 -15.01 152 20 LYS A 50 ? ? 49.09 74.15 153 20 GLU A 63 ? ? -155.00 89.91 #