data_2KKY # _entry.id 2KKY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KKY pdb_00002kky 10.2210/pdb2kky/pdb RCSB RCSB101249 ? ? WWPDB D_1000101249 ? ? BMRB 16375 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified ET109A TargetDB . unspecified 2KKX PDB 'REDUCED NLEG2-3' unspecified 16375 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KKY _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-06-29 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, B.' 1 'Yee, A.' 2 'Fares, C.' 3 'Lemak, A.' 4 'Semest, A.' 5 'Claude, M.' 6 'Singer, A.' 7 'Edwards, A.' 8 'Savchenko, A.' 9 'Montelione, G.T.' 10 'Joachimiak, A.' 11 'Arrowsmith, C.H.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 'Midwest Center for Structural Genomics (MCSG)' 14 'Ontario Centre for Structural Proteomics (OCSP)' 15 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'NleG Type 3 effectors from enterohaemorrhagic Escherichia coli are U-Box E3 ubiquitin ligases.' 'Plos Pathog.' 6 e1000960 e1000960 2010 ? US 1553-7366 ? ? 20585566 10.1371/journal.ppat.1000960 1 'A novel strategy for NMR resonance assignment and protein structure determination.' J.Biomol.Nmr 49 27 38 2011 JBNME9 NE 0925-2738 0800 ? 21161328 10.1007/s10858-010-9458-0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, B.' 1 ? primary 'Skarina, T.' 2 ? primary 'Yee, A.' 3 ? primary 'Jobin, M.C.' 4 ? primary 'Dileo, R.' 5 ? primary 'Semesi, A.' 6 ? primary 'Fares, C.' 7 ? primary 'Lemak, A.' 8 ? primary 'Coombes, B.K.' 9 ? primary 'Arrowsmith, C.H.' 10 ? primary 'Singer, A.U.' 11 ? primary 'Savchenko, A.' 12 ? 1 'Lemak, A.' 13 ? 1 'Gutmanas, A.' 14 ? 1 'Chitayat, S.' 15 ? 1 'Karra, M.' 16 ? 1 'Fares, C.' 17 ? 1 'Sunnerhagen, M.' 18 ? 1 'Arrowsmith, C.H.' 19 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Uncharacterized protein ECs2156' _entity.formula_weight 11290.848 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 90-191' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITAS IIVKHEECIYDDTRGNFIIKGN ; _entity_poly.pdbx_seq_one_letter_code_can ;SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITAS IIVKHEECIYDDTRGNFIIKGN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ET109A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLN n 1 3 GLU n 1 4 SER n 1 5 ILE n 1 6 GLN n 1 7 ASN n 1 8 LYS n 1 9 ILE n 1 10 SER n 1 11 GLN n 1 12 CYS n 1 13 LYS n 1 14 PHE n 1 15 SER n 1 16 VAL n 1 17 CYS n 1 18 PRO n 1 19 GLU n 1 20 ARG n 1 21 LEU n 1 22 GLN n 1 23 CYS n 1 24 PRO n 1 25 LEU n 1 26 GLU n 1 27 ALA n 1 28 ILE n 1 29 GLN n 1 30 CYS n 1 31 PRO n 1 32 ILE n 1 33 THR n 1 34 LEU n 1 35 GLU n 1 36 GLN n 1 37 PRO n 1 38 GLU n 1 39 LYS n 1 40 GLY n 1 41 ILE n 1 42 PHE n 1 43 VAL n 1 44 LYS n 1 45 ASN n 1 46 SER n 1 47 ASP n 1 48 GLY n 1 49 SER n 1 50 ASP n 1 51 VAL n 1 52 CYS n 1 53 THR n 1 54 LEU n 1 55 PHE n 1 56 ASP n 1 57 ALA n 1 58 ALA n 1 59 ALA n 1 60 PHE n 1 61 SER n 1 62 ARG n 1 63 LEU n 1 64 VAL n 1 65 GLY n 1 66 GLU n 1 67 GLY n 1 68 LEU n 1 69 PRO n 1 70 HIS n 1 71 PRO n 1 72 LEU n 1 73 THR n 1 74 ARG n 1 75 GLU n 1 76 PRO n 1 77 ILE n 1 78 THR n 1 79 ALA n 1 80 SER n 1 81 ILE n 1 82 ILE n 1 83 VAL n 1 84 LYS n 1 85 HIS n 1 86 GLU n 1 87 GLU n 1 88 CYS n 1 89 ILE n 1 90 TYR n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 ARG n 1 95 GLY n 1 96 ASN n 1 97 PHE n 1 98 ILE n 1 99 ILE n 1 100 LYS n 1 101 GLY n 1 102 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ECs2156, Z2149' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain O157:H7 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83334 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8X509_ECO57 _struct_ref.pdbx_db_accession Q8X509 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITAS IIVKHEECIYDDTRGNFIIKGN ; _struct_ref.pdbx_align_begin 90 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KKY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 102 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8X509 _struct_ref_seq.db_align_beg 90 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 191 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 90 _struct_ref_seq.pdbx_auth_seq_align_end 191 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D HNCO' 1 2 1 '3D CBCA(CO)NH' 1 3 1 '3D HBHA(CO)NH' 1 4 1 '3D HNCA' 1 5 1 '3D HCCH-TOCSY' 1 6 1 '3D CCH-TOCSY' 1 7 1 '3D 1H-15N NOESY' 1 8 1 '3D 1H-13C NOESY' 1 9 1 '3D 1H-13C NOESY aromatic' 1 10 2 '2D 1H-13C HSQC' 1 11 1 '3D IPAP-J HNCO' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 300 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.5 mM [U-100% 13C; U-100% 15N] NleG, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 mM DTT, 1 mM benzamidine, 0.01 % sodium azide, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;0.5 mM [U-7% 13C; U-100% 15N] NleG, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 mM DTT, 1 mM benzamidine, 0.01 % sodium azide, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KKY _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KKY _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KKY _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.3 1 'Gutmanas and Arrowsmith' processing MDDGUI 1.0 2 Goddard 'data analysis' Sparky 3.95 3 Goddard 'peak picking' Sparky 3.95 4 'Lemak and Arrowsmith' 'chemical shift assignment' FAWN 1.0 5 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 6 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 7 'Huang, Tejero, Powers and Montelione' 'nmr structure quality assessment' AutoStructure ? 8 'Bhattacharya and Montelione' 'nmr structure quality assessment' PSVS ? 9 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'PSI Methods Development' _exptl.entry_id 2KKY _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KKY _struct.title ;Solution Structure of C-terminal domain of oxidized NleG2-3 (residue 90-191) from Pathogenic E. coli O157:H7. Northeast Structural Genomics Consortium and Midwest Center for Structural Genomics target ET109A ; _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KKY _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Methods Development, U-box domain, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Midwest Center for Structural Genomics, MCSG, Ontario Centre for Structural Proteomics, OCSP, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? CYS A 12 ? SER A 90 CYS A 101 1 ? 12 HELX_P HELX_P2 2 CYS A 17 ? GLN A 22 ? CYS A 106 GLN A 111 1 ? 6 HELX_P HELX_P3 3 PRO A 24 ? GLN A 29 ? PRO A 113 GLN A 118 1 ? 6 HELX_P HELX_P4 4 ALA A 57 ? GLU A 66 ? ALA A 146 GLU A 155 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 52 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 88 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 141 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 177 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.023 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 40 ? LYS A 44 ? GLY A 129 LYS A 133 A 2 CYS A 52 ? ASP A 56 ? CYS A 141 ASP A 145 B 1 ILE A 89 ? ASP A 91 ? ILE A 178 ASP A 180 B 2 ASN A 96 ? ILE A 98 ? ASN A 185 ILE A 187 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 43 ? N VAL A 132 O THR A 53 ? O THR A 142 B 1 2 N ILE A 89 ? N ILE A 178 O ILE A 98 ? O ILE A 187 # _atom_sites.entry_id 2KKY _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 90 90 SER SER A . n A 1 2 GLN 2 91 91 GLN GLN A . n A 1 3 GLU 3 92 92 GLU GLU A . n A 1 4 SER 4 93 93 SER SER A . n A 1 5 ILE 5 94 94 ILE ILE A . n A 1 6 GLN 6 95 95 GLN GLN A . n A 1 7 ASN 7 96 96 ASN ASN A . n A 1 8 LYS 8 97 97 LYS LYS A . n A 1 9 ILE 9 98 98 ILE ILE A . n A 1 10 SER 10 99 99 SER SER A . n A 1 11 GLN 11 100 100 GLN GLN A . n A 1 12 CYS 12 101 101 CYS CYS A . n A 1 13 LYS 13 102 102 LYS LYS A . n A 1 14 PHE 14 103 103 PHE PHE A . n A 1 15 SER 15 104 104 SER SER A . n A 1 16 VAL 16 105 105 VAL VAL A . n A 1 17 CYS 17 106 106 CYS CYS A . n A 1 18 PRO 18 107 107 PRO PRO A . n A 1 19 GLU 19 108 108 GLU GLU A . n A 1 20 ARG 20 109 109 ARG ARG A . n A 1 21 LEU 21 110 110 LEU LEU A . n A 1 22 GLN 22 111 111 GLN GLN A . n A 1 23 CYS 23 112 112 CYS CYS A . n A 1 24 PRO 24 113 113 PRO PRO A . n A 1 25 LEU 25 114 114 LEU LEU A . n A 1 26 GLU 26 115 115 GLU GLU A . n A 1 27 ALA 27 116 116 ALA ALA A . n A 1 28 ILE 28 117 117 ILE ILE A . n A 1 29 GLN 29 118 118 GLN GLN A . n A 1 30 CYS 30 119 119 CYS CYS A . n A 1 31 PRO 31 120 120 PRO PRO A . n A 1 32 ILE 32 121 121 ILE ILE A . n A 1 33 THR 33 122 122 THR THR A . n A 1 34 LEU 34 123 123 LEU LEU A . n A 1 35 GLU 35 124 124 GLU GLU A . n A 1 36 GLN 36 125 125 GLN GLN A . n A 1 37 PRO 37 126 126 PRO PRO A . n A 1 38 GLU 38 127 127 GLU GLU A . n A 1 39 LYS 39 128 128 LYS LYS A . n A 1 40 GLY 40 129 129 GLY GLY A . n A 1 41 ILE 41 130 130 ILE ILE A . n A 1 42 PHE 42 131 131 PHE PHE A . n A 1 43 VAL 43 132 132 VAL VAL A . n A 1 44 LYS 44 133 133 LYS LYS A . n A 1 45 ASN 45 134 134 ASN ASN A . n A 1 46 SER 46 135 135 SER SER A . n A 1 47 ASP 47 136 136 ASP ASP A . n A 1 48 GLY 48 137 137 GLY GLY A . n A 1 49 SER 49 138 138 SER SER A . n A 1 50 ASP 50 139 139 ASP ASP A . n A 1 51 VAL 51 140 140 VAL VAL A . n A 1 52 CYS 52 141 141 CYS CYS A . n A 1 53 THR 53 142 142 THR THR A . n A 1 54 LEU 54 143 143 LEU LEU A . n A 1 55 PHE 55 144 144 PHE PHE A . n A 1 56 ASP 56 145 145 ASP ASP A . n A 1 57 ALA 57 146 146 ALA ALA A . n A 1 58 ALA 58 147 147 ALA ALA A . n A 1 59 ALA 59 148 148 ALA ALA A . n A 1 60 PHE 60 149 149 PHE PHE A . n A 1 61 SER 61 150 150 SER SER A . n A 1 62 ARG 62 151 151 ARG ARG A . n A 1 63 LEU 63 152 152 LEU LEU A . n A 1 64 VAL 64 153 153 VAL VAL A . n A 1 65 GLY 65 154 154 GLY GLY A . n A 1 66 GLU 66 155 155 GLU GLU A . n A 1 67 GLY 67 156 156 GLY GLY A . n A 1 68 LEU 68 157 157 LEU LEU A . n A 1 69 PRO 69 158 158 PRO PRO A . n A 1 70 HIS 70 159 159 HIS HIS A . n A 1 71 PRO 71 160 160 PRO PRO A . n A 1 72 LEU 72 161 161 LEU LEU A . n A 1 73 THR 73 162 162 THR THR A . n A 1 74 ARG 74 163 163 ARG ARG A . n A 1 75 GLU 75 164 164 GLU GLU A . n A 1 76 PRO 76 165 165 PRO PRO A . n A 1 77 ILE 77 166 166 ILE ILE A . n A 1 78 THR 78 167 167 THR THR A . n A 1 79 ALA 79 168 168 ALA ALA A . n A 1 80 SER 80 169 169 SER SER A . n A 1 81 ILE 81 170 170 ILE ILE A . n A 1 82 ILE 82 171 171 ILE ILE A . n A 1 83 VAL 83 172 172 VAL VAL A . n A 1 84 LYS 84 173 173 LYS LYS A . n A 1 85 HIS 85 174 174 HIS HIS A . n A 1 86 GLU 86 175 175 GLU GLU A . n A 1 87 GLU 87 176 176 GLU GLU A . n A 1 88 CYS 88 177 177 CYS CYS A . n A 1 89 ILE 89 178 178 ILE ILE A . n A 1 90 TYR 90 179 179 TYR TYR A . n A 1 91 ASP 91 180 180 ASP ASP A . n A 1 92 ASP 92 181 181 ASP ASP A . n A 1 93 THR 93 182 182 THR THR A . n A 1 94 ARG 94 183 183 ARG ARG A . n A 1 95 GLY 95 184 184 GLY GLY A . n A 1 96 ASN 96 185 185 ASN ASN A . n A 1 97 PHE 97 186 186 PHE PHE A . n A 1 98 ILE 98 187 187 ILE ILE A . n A 1 99 ILE 99 188 188 ILE ILE A . n A 1 100 LYS 100 189 189 LYS LYS A . n A 1 101 GLY 101 190 190 GLY GLY A . n A 1 102 ASN 102 191 191 ASN ASN A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Northeast Structural Genomics Consortium' 1 NESG 'PSI, Protein Structure Initiative' 'Midwest Center for Structural Genomics' 2 MCSG 'PSI, Protein Structure Initiative' 'Ontario Centre for Structural Proteomics' 3 OCSP ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-01-18 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2020-02-26 6 'Structure model' 1 5 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' Other 7 6 'Structure model' 'Database references' 8 6 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_database_status 4 5 'Structure model' pdbx_nmr_software 5 5 'Structure model' pdbx_nmr_spectrometer 6 6 'Structure model' database_2 7 6 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.name' 2 5 'Structure model' '_pdbx_database_status.status_code_cs' 3 5 'Structure model' '_pdbx_nmr_software.name' 4 5 'Structure model' '_pdbx_nmr_spectrometer.model' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' 7 6 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id NleG-1 0.5 ? mM '[U-100% 13C; U-100% 15N]' 1 TRIS-2 10 ? mM '[U-100% 2H]' 1 'sodium chloride-3' 300 ? mM ? 1 DTT-4 10 ? mM ? 1 benzamidine-5 1 ? mM ? 1 'sodium azide-6' 0.01 ? % ? 1 NleG-7 0.5 ? mM '[U-7% 13C; U-100% 15N]' 2 TRIS-8 10 ? mM '[U-100% 2H]' 2 'sodium chloride-9' 300 ? mM ? 2 DTT-10 10 ? mM ? 2 benzamidine-11 1 ? mM ? 2 'sodium azide-12' 0.01 ? % ? 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 104 ? ? -67.04 95.35 2 1 GLU A 127 ? ? 75.46 -45.03 3 1 GLU A 176 ? ? -42.43 -73.72 4 2 GLU A 127 ? ? 76.73 -47.43 5 2 GLU A 176 ? ? -12.00 -78.19 6 3 GLU A 127 ? ? 78.02 -44.47 7 3 LEU A 161 ? ? -85.82 -70.68 8 4 LEU A 123 ? ? 44.82 29.59 9 4 GLU A 127 ? ? 76.67 -46.87 10 4 LYS A 189 ? ? -153.26 78.50 11 5 LEU A 123 ? ? 43.85 28.66 12 5 GLU A 127 ? ? 75.42 -47.97 13 6 LEU A 123 ? ? 45.63 29.54 14 6 GLU A 127 ? ? 76.22 -48.68 15 7 GLU A 127 ? ? 75.55 -49.44 16 7 PRO A 158 ? ? -69.13 -176.96 17 7 GLU A 176 ? ? -66.24 11.90 18 8 SER A 104 ? ? -67.19 88.60 19 8 LEU A 123 ? ? 39.61 43.16 20 8 GLU A 127 ? ? 75.23 -50.88 21 8 ASP A 139 ? ? -84.45 36.45 22 8 LEU A 161 ? ? -95.30 -79.50 23 9 GLU A 127 ? ? 76.69 -42.77 24 10 LEU A 123 ? ? 42.86 29.45 25 10 GLU A 127 ? ? 76.11 -47.54 26 10 ASP A 139 ? ? -87.72 37.46 27 10 LEU A 161 ? ? -94.84 -70.58 28 10 LYS A 189 ? ? -155.73 77.86 29 11 GLU A 127 ? ? 76.58 -49.94 30 11 ASP A 139 ? ? -86.00 44.20 31 12 SER A 104 ? ? -69.51 99.83 32 12 LEU A 123 ? ? 46.37 26.69 33 12 GLU A 127 ? ? 76.65 -48.51 34 12 GLU A 176 ? ? -68.59 14.00 35 13 GLU A 127 ? ? 75.47 -44.07 36 13 ASP A 139 ? ? -84.06 30.76 37 13 GLU A 176 ? ? -29.12 -77.97 38 14 LEU A 123 ? ? 45.72 28.17 39 14 GLU A 127 ? ? 76.94 -46.16 40 14 SER A 135 ? ? -172.88 145.22 41 14 PRO A 165 ? ? -59.16 107.28 42 15 LEU A 123 ? ? 47.06 28.11 43 15 GLU A 127 ? ? 77.18 -47.02 44 16 GLU A 127 ? ? 75.98 -49.59 45 16 GLU A 176 ? ? -53.77 -70.97 46 17 SER A 104 ? ? -69.19 98.86 47 17 LEU A 123 ? ? 46.12 26.60 48 17 GLU A 127 ? ? 76.56 -45.22 49 17 ASP A 139 ? ? -78.00 39.78 50 17 LEU A 161 ? ? -86.11 -79.36 51 18 GLU A 127 ? ? 76.41 -47.48 52 18 ASP A 139 ? ? -92.25 30.49 53 19 GLU A 127 ? ? 76.90 -47.77 54 19 ASP A 139 ? ? -81.51 45.48 55 20 GLU A 127 ? ? 76.73 -46.90 56 20 ARG A 163 ? ? 71.83 40.06 #