HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-JUN-09 2KKY TITLE SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF OXIDIZED NLEG2-3 (RESIDUE TITLE 2 90-191) FROM PATHOGENIC E. COLI O157:H7. NORTHEAST STRUCTURAL TITLE 3 GENOMICS CONSORTIUM AND MIDWEST CENTER FOR STRUCTURAL GENOMICS TARGET TITLE 4 ET109A COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN ECS2156; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 90-191; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 STRAIN: O157:H7; SOURCE 5 GENE: ECS2156, Z2149; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS METHODS DEVELOPMENT, U-BOX DOMAIN, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, NESG, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 4 ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS, OCSP, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.WU,A.YEE,C.FARES,A.LEMAK,A.SEMEST,M.CLAUDE,A.SINGER,A.EDWARDS, AUTHOR 2 A.SAVCHENKO,G.T.MONTELIONE,A.JOACHIMIAK,C.H.ARROWSMITH,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG),MIDWEST CENTER FOR STRUCTURAL AUTHOR 4 GENOMICS (MCSG),ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS (OCSP) REVDAT 7 14-JUN-23 2KKY 1 REMARK REVDAT 6 26-FEB-20 2KKY 1 REMARK REVDAT 5 24-JAN-18 2KKY 1 AUTHOR REVDAT 4 18-JAN-12 2KKY 1 REMARK VERSN REVDAT 3 14-JUL-10 2KKY 1 JRNL REVDAT 2 19-MAY-10 2KKY 1 JRNL REVDAT 1 25-AUG-09 2KKY 0 JRNL AUTH B.WU,T.SKARINA,A.YEE,M.C.JOBIN,R.DILEO,A.SEMESI,C.FARES, JRNL AUTH 2 A.LEMAK,B.K.COOMBES,C.H.ARROWSMITH,A.U.SINGER,A.SAVCHENKO JRNL TITL NLEG TYPE 3 EFFECTORS FROM ENTEROHAEMORRHAGIC ESCHERICHIA JRNL TITL 2 COLI ARE U-BOX E3 UBIQUITIN LIGASES. JRNL REF PLOS PATHOG. V. 6 00960 2010 JRNL REFN ISSN 1553-7366 JRNL PMID 20585566 JRNL DOI 10.1371/JOURNAL.PPAT.1000960 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.LEMAK,A.GUTMANAS,S.CHITAYAT,M.KARRA,C.FARES,M.SUNNERHAGEN, REMARK 1 AUTH 2 C.H.ARROWSMITH REMARK 1 TITL A NOVEL STRATEGY FOR NMR RESONANCE ASSIGNMENT AND PROTEIN REMARK 1 TITL 2 STRUCTURE DETERMINATION. REMARK 1 REF J.BIOMOL.NMR V. 49 27 2011 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 21161328 REMARK 1 DOI 10.1007/S10858-010-9458-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-09. REMARK 100 THE DEPOSITION ID IS D_1000101249. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 NLEG, 10 MM [U-100% 2H] TRIS, REMARK 210 300 MM SODIUM CHLORIDE, 10 MM REMARK 210 DTT, 1 MM BENZAMIDINE, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-7% 13C; U-100% 15N] REMARK 210 NLEG, 10 MM [U-100% 2H] TRIS, REMARK 210 300 MM SODIUM CHLORIDE, 10 MM REMARK 210 DTT, 1 MM BENZAMIDINE, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HNCA; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-13C REMARK 210 HSQC; 3D IPAP-J HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MDDGUI 1.0, SPARKY 3.95, FAWN REMARK 210 1.0, CYANA 2.1, AUTOSTRUCTURE, REMARK 210 PSVS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 104 95.35 -67.04 REMARK 500 1 GLU A 127 -45.03 75.46 REMARK 500 1 GLU A 176 -73.72 -42.43 REMARK 500 2 GLU A 127 -47.43 76.73 REMARK 500 2 GLU A 176 -78.19 -12.00 REMARK 500 3 GLU A 127 -44.47 78.02 REMARK 500 3 LEU A 161 -70.68 -85.82 REMARK 500 4 LEU A 123 29.59 44.82 REMARK 500 4 GLU A 127 -46.87 76.67 REMARK 500 4 LYS A 189 78.50 -153.26 REMARK 500 5 LEU A 123 28.66 43.85 REMARK 500 5 GLU A 127 -47.97 75.42 REMARK 500 6 LEU A 123 29.54 45.63 REMARK 500 6 GLU A 127 -48.68 76.22 REMARK 500 7 GLU A 127 -49.44 75.55 REMARK 500 7 PRO A 158 -176.96 -69.13 REMARK 500 7 GLU A 176 11.90 -66.24 REMARK 500 8 SER A 104 88.60 -67.19 REMARK 500 8 LEU A 123 43.16 39.61 REMARK 500 8 GLU A 127 -50.88 75.23 REMARK 500 8 ASP A 139 36.45 -84.45 REMARK 500 8 LEU A 161 -79.50 -95.30 REMARK 500 9 GLU A 127 -42.77 76.69 REMARK 500 10 LEU A 123 29.45 42.86 REMARK 500 10 GLU A 127 -47.54 76.11 REMARK 500 10 ASP A 139 37.46 -87.72 REMARK 500 10 LEU A 161 -70.58 -94.84 REMARK 500 10 LYS A 189 77.86 -155.73 REMARK 500 11 GLU A 127 -49.94 76.58 REMARK 500 11 ASP A 139 44.20 -86.00 REMARK 500 12 SER A 104 99.83 -69.51 REMARK 500 12 LEU A 123 26.69 46.37 REMARK 500 12 GLU A 127 -48.51 76.65 REMARK 500 12 GLU A 176 14.00 -68.59 REMARK 500 13 GLU A 127 -44.07 75.47 REMARK 500 13 ASP A 139 30.76 -84.06 REMARK 500 13 GLU A 176 -77.97 -29.12 REMARK 500 14 LEU A 123 28.17 45.72 REMARK 500 14 GLU A 127 -46.16 76.94 REMARK 500 14 SER A 135 145.22 -172.88 REMARK 500 14 PRO A 165 107.28 -59.16 REMARK 500 15 LEU A 123 28.11 47.06 REMARK 500 15 GLU A 127 -47.02 77.18 REMARK 500 16 GLU A 127 -49.59 75.98 REMARK 500 16 GLU A 176 -70.97 -53.77 REMARK 500 17 SER A 104 98.86 -69.19 REMARK 500 17 LEU A 123 26.60 46.12 REMARK 500 17 GLU A 127 -45.22 76.56 REMARK 500 17 ASP A 139 39.78 -78.00 REMARK 500 17 LEU A 161 -79.36 -86.11 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ET109A RELATED DB: TARGETDB REMARK 900 RELATED ID: 2KKX RELATED DB: PDB REMARK 900 REDUCED NLEG2-3 REMARK 900 RELATED ID: 16375 RELATED DB: BMRB DBREF 2KKY A 90 191 UNP Q8X509 Q8X509_ECO57 90 191 SEQRES 1 A 102 SER GLN GLU SER ILE GLN ASN LYS ILE SER GLN CYS LYS SEQRES 2 A 102 PHE SER VAL CYS PRO GLU ARG LEU GLN CYS PRO LEU GLU SEQRES 3 A 102 ALA ILE GLN CYS PRO ILE THR LEU GLU GLN PRO GLU LYS SEQRES 4 A 102 GLY ILE PHE VAL LYS ASN SER ASP GLY SER ASP VAL CYS SEQRES 5 A 102 THR LEU PHE ASP ALA ALA ALA PHE SER ARG LEU VAL GLY SEQRES 6 A 102 GLU GLY LEU PRO HIS PRO LEU THR ARG GLU PRO ILE THR SEQRES 7 A 102 ALA SER ILE ILE VAL LYS HIS GLU GLU CYS ILE TYR ASP SEQRES 8 A 102 ASP THR ARG GLY ASN PHE ILE ILE LYS GLY ASN HELIX 1 1 SER A 90 CYS A 101 1 12 HELIX 2 2 CYS A 106 GLN A 111 1 6 HELIX 3 3 PRO A 113 GLN A 118 1 6 HELIX 4 4 ALA A 146 GLU A 155 1 10 SHEET 1 A 2 GLY A 129 LYS A 133 0 SHEET 2 A 2 CYS A 141 ASP A 145 -1 O THR A 142 N VAL A 132 SHEET 1 B 2 ILE A 178 ASP A 180 0 SHEET 2 B 2 ASN A 185 ILE A 187 -1 O ILE A 187 N ILE A 178 SSBOND 1 CYS A 141 CYS A 177 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1