data_2KNN # _entry.id 2KNN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KNN pdb_00002knn 10.2210/pdb2knn/pdb RCSB RCSB101345 ? ? WWPDB D_1000101345 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 2knm _pdbx_database_related.db_name PDB _pdbx_database_related.details 'NMR structure of the native unmodified peptide.' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KNN _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-08-27 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Rosengren, K.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'The conserved glu in the cyclotide cycloviolacin O2 has a key structural role.' _citation.journal_abbrev Chembiochem _citation.journal_volume 10 _citation.page_first 2354 _citation.page_last 2360 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19735083 _citation.pdbx_database_id_DOI 10.1002/cbic.200900342 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goransson, U.' 1 ? primary 'Herrmann, A.' 2 ? primary 'Burman, R.' 3 ? primary 'Haugaard-Jonsson, L.M.' 4 ? primary 'Rosengren, K.J.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description Cycloviolacin-O2 _entity.formula_weight 3181.797 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GIPCG(GME)SCVWIPCISSAIGCSCKSKVCYRN' _entity_poly.pdbx_seq_one_letter_code_can GIPCGXSCVWIPCISSAIGCSCKSKVCYRN _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 PRO n 1 4 CYS n 1 5 GLY n 1 6 GME n 1 7 SER n 1 8 CYS n 1 9 VAL n 1 10 TRP n 1 11 ILE n 1 12 PRO n 1 13 CYS n 1 14 ILE n 1 15 SER n 1 16 SER n 1 17 ALA n 1 18 ILE n 1 19 GLY n 1 20 CYS n 1 21 SER n 1 22 CYS n 1 23 LYS n 1 24 SER n 1 25 LYS n 1 26 VAL n 1 27 CYS n 1 28 TYR n 1 29 ARG n 1 30 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Viola odorata' _entity_src_nat.pdbx_organism_scientific 'Viola odorata' _entity_src_nat.pdbx_ncbi_taxonomy_id 97441 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYO2_VIOOD _struct_ref.pdbx_db_accession P58434 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GIPCGESCVWIPCISSAIGCSCKSKVCYRN _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KNN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 30 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P58434 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 30 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GME 'L-peptide linking' n '5-O-methyl-glutamic acid' '(2S)-2-amino-5-methoxy-5-oxopentanoic acid' 'C6 H11 N O4' 161.156 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H TOCSY' 1 2 1 '2D DQF-COSY' 1 3 1 '2D 1H-1H NOESY' 1 4 2 '2D 1H-1H TOCSY' 1 5 2 '2D 1H-1H NOESY' 1 6 1 '2D 1H-1H TOCSY' 1 7 1 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1-2 mM cycloviolacin O2(Me), 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1-2 mM cycloviolacin O2(Me), 100% D2O' 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian INOVA 1 'Varian INOVA' 500 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KNN _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;Structures were generated using torsion angle dynamics within the program CNS and refined and energy minimised using Cartesian dynamics in explicit water. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KNN _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 3.284 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.347 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KNN _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMR 6.1 1 Varian processing VNMR 6.1 2 'Keller and Wuthrich' 'data analysis' CARA ? 3 'Keller and Wuthrich' 'chemical shift assignment' CARA ? 4 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.0 5 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.2 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;NMR structure of the cyclotide cycloviolacin O2 in which the side chain carboxyl group of Glu6 has been chemically modified in the form of a methylation. ; _exptl.entry_id 2KNN _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KNN _struct.title 'Solution structure of the cyclotide cycloviolacin O2 with Glu6 methylated (cyO2Me)' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KNN _struct_keywords.pdbx_keywords 'PLANT PROTEIN' _struct_keywords.text ;cyclotide, cyclic cystine knot, circular protein, methylation, Cytolysis, Disulfide bond, Hemolysis, Knottin, Plant defense, PLANT PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 20 SG ? ? A CYS 4 A CYS 20 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 22 SG ? ? A CYS 8 A CYS 22 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 27 SG ? ? A CYS 13 A CYS 27 1_555 ? ? ? ? ? ? ? 2.027 ? ? covale1 covale both ? A GLY 1 N ? ? ? 1_555 A ASN 30 C ? ? A GLY 1 A ASN 30 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale2 covale both ? A GLY 5 C ? ? ? 1_555 A GME 6 N ? ? A GLY 5 A GME 6 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale3 covale both ? A GME 6 C ? ? ? 1_555 A SER 7 N ? ? A GME 6 A SER 7 1_555 ? ? ? ? ? ? ? 1.312 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 2 ? SER A 7 ? ILE A 2 SER A 7 A 2 VAL A 26 ? ARG A 29 ? VAL A 26 ARG A 29 A 3 SER A 21 ? LYS A 23 ? SER A 21 LYS A 23 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 2 ? N ILE A 2 O ARG A 29 ? O ARG A 29 A 2 3 O TYR A 28 ? O TYR A 28 N SER A 21 ? N SER A 21 # _atom_sites.entry_id 2KNN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 GME 6 6 6 GME GME A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 ASN 30 30 30 ASN ASN A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id GME _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id GME _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLU _pdbx_struct_mod_residue.details '5-O-METHYL-GLUTAMIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_spectrometer 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_struct_conn.pdbx_dist_value' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'cycloviolacin O2(Me)-1' ? 1-2 mM ? 1 'cycloviolacin O2(Me)-2' ? 1-2 mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2KNN _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 22 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 118 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 0 _pdbx_nmr_constraints.NOE_long_range_total_count 12 _pdbx_nmr_constraints.NOE_medium_range_total_count 10 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 96 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 6 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 15 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 0 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 HA A VAL 9 ? ? HD2 A LYS 25 ? ? 1.22 2 4 HA A VAL 9 ? ? HD2 A LYS 25 ? ? 1.26 3 6 HA A VAL 9 ? ? HD2 A LYS 25 ? ? 1.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 15 ? ? -71.13 23.45 2 2 CYS A 8 ? ? -150.26 54.69 3 2 TRP A 10 ? ? -144.16 -49.45 4 2 SER A 15 ? ? 65.95 -49.58 5 2 SER A 16 ? ? -170.25 -36.29 6 2 ALA A 17 ? ? 174.48 46.15 7 3 CYS A 8 ? ? -144.48 43.14 8 3 ILE A 14 ? ? -127.78 -59.22 9 3 SER A 15 ? ? 67.27 -48.95 10 3 SER A 16 ? ? -169.42 -37.65 11 3 ALA A 17 ? ? 168.36 47.73 12 4 ILE A 14 ? ? -125.50 -94.46 13 4 SER A 16 ? ? -178.90 -28.17 14 4 ALA A 17 ? ? -165.25 58.30 15 5 CYS A 8 ? ? -147.18 50.24 16 5 TRP A 10 ? ? -99.33 -60.26 17 5 ILE A 14 ? ? -124.96 -83.72 18 5 SER A 15 ? ? 67.11 -62.37 19 5 SER A 16 ? ? -176.92 30.15 20 5 CYS A 20 ? ? 79.69 165.96 21 6 CYS A 8 ? ? -150.37 39.39 22 6 ILE A 14 ? ? -106.04 -130.93 23 6 SER A 15 ? ? 67.88 -62.59 24 6 SER A 16 ? ? -158.69 16.05 25 6 ALA A 17 ? ? -94.15 43.35 26 6 ILE A 18 ? ? -63.26 98.00 27 7 CYS A 8 ? ? -140.58 33.41 28 7 ILE A 14 ? ? -89.16 -114.65 29 7 SER A 15 ? ? -69.66 33.58 30 7 ALA A 17 ? ? -174.21 53.47 31 7 ILE A 18 ? ? -57.94 108.10 32 8 CYS A 8 ? ? -146.27 50.87 33 8 TRP A 10 ? ? -139.96 -45.76 34 8 SER A 15 ? ? 66.67 -51.75 35 8 SER A 16 ? ? -160.81 -39.64 36 8 ALA A 17 ? ? 167.14 47.32 37 9 CYS A 8 ? ? -150.65 54.21 38 9 TRP A 10 ? ? -139.74 -51.28 39 9 ILE A 14 ? ? -102.27 -78.87 40 9 SER A 15 ? ? 51.98 3.10 41 9 ALA A 17 ? ? -167.71 47.47 42 10 CYS A 8 ? ? -150.29 52.51 43 10 ILE A 14 ? ? -95.29 -64.47 44 10 SER A 15 ? ? -70.06 21.76 45 10 SER A 16 ? ? -154.91 14.29 46 10 ALA A 17 ? ? -175.46 60.42 47 11 CYS A 8 ? ? -140.01 48.99 48 11 ILE A 14 ? ? -97.11 -70.01 49 11 SER A 15 ? ? -70.72 22.77 50 11 SER A 16 ? ? -154.59 15.85 51 11 ALA A 17 ? ? -176.28 58.46 52 11 ILE A 18 ? ? -50.76 106.82 53 12 CYS A 8 ? ? -142.34 41.36 54 12 SER A 15 ? ? -70.02 34.56 55 13 CYS A 8 ? ? -149.52 51.27 56 13 TRP A 10 ? ? -140.90 -49.58 57 13 SER A 15 ? ? 66.15 -49.60 58 13 SER A 16 ? ? -178.99 -25.27 59 13 ALA A 17 ? ? -170.81 53.74 60 14 CYS A 8 ? ? -150.66 49.83 61 14 TRP A 10 ? ? -135.78 -49.42 62 14 ILE A 14 ? ? -133.90 -75.32 63 14 SER A 15 ? ? -60.32 5.24 64 14 SER A 16 ? ? -158.82 18.99 65 14 ALA A 17 ? ? -169.33 53.61 66 15 CYS A 8 ? ? -151.13 45.14 67 15 VAL A 9 ? ? -72.86 -75.43 68 15 ILE A 14 ? ? -123.67 -79.70 69 15 SER A 15 ? ? 64.91 -64.41 70 15 SER A 16 ? ? 178.58 31.57 71 15 ALA A 17 ? ? -159.79 68.27 72 15 ILE A 18 ? ? -65.52 95.95 73 16 CYS A 8 ? ? -150.11 49.78 74 16 TRP A 10 ? ? -136.23 -50.43 75 16 ILE A 14 ? ? -125.93 -64.69 76 16 SER A 15 ? ? 67.46 -48.28 77 16 SER A 16 ? ? -175.86 -35.07 78 16 ALA A 17 ? ? 170.16 52.93 79 17 CYS A 8 ? ? -148.03 50.77 80 17 ILE A 14 ? ? -104.01 -116.85 81 17 SER A 15 ? ? -71.91 33.95 82 17 ALA A 17 ? ? -167.93 50.66 83 18 CYS A 8 ? ? -150.45 44.84 84 18 TRP A 10 ? ? -128.11 -52.45 85 18 ILE A 14 ? ? -100.10 -70.97 86 18 SER A 15 ? ? -69.07 19.16 87 19 CYS A 8 ? ? -147.76 46.52 88 19 SER A 15 ? ? 51.96 7.71 89 19 ILE A 18 ? ? -159.75 43.25 90 20 SER A 15 ? ? -41.51 76.21 91 20 CYS A 20 ? ? 78.28 164.61 #