HEADER UNKNOWN FUNCTION 30-AUG-09 2KNP TITLE ISOLATION AND CHARACTERIZATION OF PEPTIDES FROM MOMORDICA TITLE 2 COCHINCHINENSIS SEEDS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCOCC-1; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOMORDICA COCHINCHINENSIS; SOURCE 3 ORGANISM_TAXID: 3674; SOURCE 4 TISSUE: SEEDS KEYWDS MOMORDICA COCHINCHINENSIS, DISULFIDE-RICH PEPTIDES, CYSTINE KNOT KEYWDS 2 MOTIF, CYTOTOXIC, MELANOMA CELL LINE, NON-HEMOLYTIC, SEEDS EXTRACT, KEYWDS 3 MCOCC-1, MCOCC-2, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.L.DALY,L.CHAN REVDAT 2 16-MAR-22 2KNP 1 REMARK REVDAT 1 10-NOV-09 2KNP 0 JRNL AUTH L.Y.CHAN,C.K.WANG,J.M.MAJOR,K.P.GREENWOOD,R.J.LEWIS, JRNL AUTH 2 D.J.CRAIK,N.L.DALY JRNL TITL ISOLATION AND CHARACTERIZATION OF PEPTIDES FROM MOMORDICA JRNL TITL 2 COCHINCHINENSIS SEEDS. JRNL REF J.NAT.PROD. V. 72 1453 2009 JRNL REFN ISSN 0163-3864 JRNL PMID 19711988 JRNL DOI 10.1021/NP900174N REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON, REMARK 3 WARREN (CNS), BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KNP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000101347. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MG/ML MCOCC-1-1, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D DQF-COSY; 2D 1H-1H NOESY; 2D REMARK 210 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 18 O SER A 33 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 22 -147.43 -110.37 REMARK 500 2 CYS A 7 -169.91 -127.59 REMARK 500 2 LEU A 9 -74.62 -70.72 REMARK 500 2 THR A 22 -152.21 -106.42 REMARK 500 3 LEU A 9 -72.45 -73.14 REMARK 500 3 THR A 22 -153.99 -107.08 REMARK 500 3 SER A 31 -166.10 -106.47 REMARK 500 4 LEU A 9 -81.48 69.32 REMARK 500 4 THR A 22 -149.60 -110.09 REMARK 500 4 PRO A 25 109.75 -58.36 REMARK 500 4 SER A 31 -167.94 -107.68 REMARK 500 5 PHE A 10 55.62 -107.84 REMARK 500 5 THR A 22 -150.68 -108.71 REMARK 500 6 LEU A 9 -96.53 55.86 REMARK 500 6 THR A 22 -150.50 -108.19 REMARK 500 6 PRO A 25 108.39 -58.26 REMARK 500 7 THR A 22 -154.39 -105.70 REMARK 500 7 PRO A 25 109.51 -57.90 REMARK 500 8 LEU A 9 -83.35 -73.77 REMARK 500 8 THR A 22 -150.84 -108.28 REMARK 500 9 CYS A 7 -92.50 -115.23 REMARK 500 9 LEU A 9 38.42 -94.85 REMARK 500 9 PHE A 10 -23.84 -145.32 REMARK 500 9 THR A 22 -152.50 -107.64 REMARK 500 9 PRO A 25 106.42 -57.71 REMARK 500 10 THR A 22 -152.78 -109.67 REMARK 500 10 PRO A 25 109.55 -59.46 REMARK 500 11 ARG A 11 98.19 -68.90 REMARK 500 11 THR A 22 -153.74 -105.00 REMARK 500 12 CYS A 7 -166.73 -117.60 REMARK 500 12 PHE A 10 72.19 -106.68 REMARK 500 12 THR A 22 -151.65 -108.40 REMARK 500 13 LEU A 9 -85.99 71.18 REMARK 500 13 SER A 12 75.61 -102.21 REMARK 500 13 THR A 22 -151.76 -108.92 REMARK 500 14 CYS A 7 -167.33 -121.96 REMARK 500 14 PHE A 10 47.49 -96.37 REMARK 500 14 THR A 22 -154.80 -99.62 REMARK 500 15 CYS A 7 -159.67 -121.74 REMARK 500 15 PHE A 10 49.61 -106.83 REMARK 500 15 ARG A 11 93.07 -69.68 REMARK 500 15 SER A 12 49.33 -91.93 REMARK 500 15 THR A 22 -150.89 -107.49 REMARK 500 16 CYS A 7 -158.24 -130.13 REMARK 500 16 THR A 22 -153.77 -106.09 REMARK 500 16 SER A 31 -166.06 -119.39 REMARK 500 17 LEU A 9 -81.48 70.41 REMARK 500 17 THR A 22 -153.56 -105.92 REMARK 500 17 PRO A 25 108.04 -58.24 REMARK 500 18 CYS A 7 -164.41 -124.02 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY REMARK 999 EXIST. DBREF 2KNP A 1 33 PDB 2KNP 2KNP 1 33 SEQRES 1 A 33 GLY CYS GLU GLY LYS GLN CYS GLY LEU PHE ARG SER CYS SEQRES 2 A 33 GLY GLY GLY CYS ARG CYS TRP PRO THR VAL THR PRO GLY SEQRES 3 A 33 VAL GLY ILE CYS SER SER SER SHEET 1 A 3 LYS A 5 GLY A 8 0 SHEET 2 A 3 VAL A 27 CYS A 30 -1 O CYS A 30 N LYS A 5 SHEET 3 A 3 CYS A 19 PRO A 21 -1 N TRP A 20 O ILE A 29 SSBOND 1 CYS A 2 CYS A 17 1555 1555 2.03 SSBOND 2 CYS A 7 CYS A 19 1555 1555 2.03 SSBOND 3 CYS A 13 CYS A 30 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1