data_2KOI # _entry.id 2KOI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KOI RCSB RCSB101375 WWPDB D_1000101375 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id GO.102706 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KOI _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-22 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cornilescu, C.C.' 1 'Cornilescu, G.' 2 'Ulijasz, A.T.' 3 'Vierstra, R.D.' 4 'Markley, J.L.' 5 'Center for Eukaryotic Structural Genomics (CESG)' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural basis for the photoconversion of a phytochrome to the activated Pfr form' Nature 463 250 254 2010 NATUAS UK 0028-0836 0006 ? 20075921 10.1038/nature08671 1 'Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state' J.Mol.Biol. 383 403 413 2008 JMOBAK UK 0022-2836 0070 ? 18762196 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ulijasz, A.T.' 1 primary 'Cornilescu, G.' 2 primary 'Cornilescu, C.C.' 3 primary 'Zhang, J.' 4 primary 'Rivera, M.' 5 primary 'Markley, J.L.' 6 primary 'Vierstra, R.D.' 7 1 'Cornilescu, G.' 8 1 'Ulijasz, A.T.' 9 1 'Cornilescu, C.C.' 10 1 'Markley, J.L.' 11 1 'Vierstra, R.D.' 12 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sensor protein' 19071.775 1 2.7.13.3 ? 'GAF DOMAIN (UNP RESIDUES 31-200)' ? 2 non-polymer syn PHYCOCYANOBILIN 588.694 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SYB-CPH1(GAF)' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LDQILRATVEEVRAFLGTDRVKVYRFDPEGHGTVVAEARGGERLPSLLGLTFPAGDIPEEARRLFRLAQVRVIVDVEAQS RSISQPESWGLSARVPLGEPLQRPVDPCHVHYLKSMGVASSLVVPLMHHQELWGLLVSHHAEPRPYSQEELQVVQLLADQ VSIAIAQAELSL ; _entity_poly.pdbx_seq_one_letter_code_can ;LDQILRATVEEVRAFLGTDRVKVYRFDPEGHGTVVAEARGGERLPSLLGLTFPAGDIPEEARRLFRLAQVRVIVDVEAQS RSISQPESWGLSARVPLGEPLQRPVDPCHVHYLKSMGVASSLVVPLMHHQELWGLLVSHHAEPRPYSQEELQVVQLLADQ VSIAIAQAELSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier GO.102706 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ASP n 1 3 GLN n 1 4 ILE n 1 5 LEU n 1 6 ARG n 1 7 ALA n 1 8 THR n 1 9 VAL n 1 10 GLU n 1 11 GLU n 1 12 VAL n 1 13 ARG n 1 14 ALA n 1 15 PHE n 1 16 LEU n 1 17 GLY n 1 18 THR n 1 19 ASP n 1 20 ARG n 1 21 VAL n 1 22 LYS n 1 23 VAL n 1 24 TYR n 1 25 ARG n 1 26 PHE n 1 27 ASP n 1 28 PRO n 1 29 GLU n 1 30 GLY n 1 31 HIS n 1 32 GLY n 1 33 THR n 1 34 VAL n 1 35 VAL n 1 36 ALA n 1 37 GLU n 1 38 ALA n 1 39 ARG n 1 40 GLY n 1 41 GLY n 1 42 GLU n 1 43 ARG n 1 44 LEU n 1 45 PRO n 1 46 SER n 1 47 LEU n 1 48 LEU n 1 49 GLY n 1 50 LEU n 1 51 THR n 1 52 PHE n 1 53 PRO n 1 54 ALA n 1 55 GLY n 1 56 ASP n 1 57 ILE n 1 58 PRO n 1 59 GLU n 1 60 GLU n 1 61 ALA n 1 62 ARG n 1 63 ARG n 1 64 LEU n 1 65 PHE n 1 66 ARG n 1 67 LEU n 1 68 ALA n 1 69 GLN n 1 70 VAL n 1 71 ARG n 1 72 VAL n 1 73 ILE n 1 74 VAL n 1 75 ASP n 1 76 VAL n 1 77 GLU n 1 78 ALA n 1 79 GLN n 1 80 SER n 1 81 ARG n 1 82 SER n 1 83 ILE n 1 84 SER n 1 85 GLN n 1 86 PRO n 1 87 GLU n 1 88 SER n 1 89 TRP n 1 90 GLY n 1 91 LEU n 1 92 SER n 1 93 ALA n 1 94 ARG n 1 95 VAL n 1 96 PRO n 1 97 LEU n 1 98 GLY n 1 99 GLU n 1 100 PRO n 1 101 LEU n 1 102 GLN n 1 103 ARG n 1 104 PRO n 1 105 VAL n 1 106 ASP n 1 107 PRO n 1 108 CYS n 1 109 HIS n 1 110 VAL n 1 111 HIS n 1 112 TYR n 1 113 LEU n 1 114 LYS n 1 115 SER n 1 116 MET n 1 117 GLY n 1 118 VAL n 1 119 ALA n 1 120 SER n 1 121 SER n 1 122 LEU n 1 123 VAL n 1 124 VAL n 1 125 PRO n 1 126 LEU n 1 127 MET n 1 128 HIS n 1 129 HIS n 1 130 GLN n 1 131 GLU n 1 132 LEU n 1 133 TRP n 1 134 GLY n 1 135 LEU n 1 136 LEU n 1 137 VAL n 1 138 SER n 1 139 HIS n 1 140 HIS n 1 141 ALA n 1 142 GLU n 1 143 PRO n 1 144 ARG n 1 145 PRO n 1 146 TYR n 1 147 SER n 1 148 GLN n 1 149 GLU n 1 150 GLU n 1 151 LEU n 1 152 GLN n 1 153 VAL n 1 154 VAL n 1 155 GLN n 1 156 LEU n 1 157 LEU n 1 158 ALA n 1 159 ASP n 1 160 GLN n 1 161 VAL n 1 162 SER n 1 163 ILE n 1 164 ALA n 1 165 ILE n 1 166 ALA n 1 167 GLN n 1 168 ALA n 1 169 GLU n 1 170 LEU n 1 171 SER n 1 172 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CYB_2465 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain "JA-2-3B'a(2-13)" _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synechococcus sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 321332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PGEX-4T _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2JIZ5_SYNJB _struct_ref.pdbx_db_accession Q2JIZ5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LDQILRATVEEVRAFLGTDRVKVYRFDPEGHGTVVAEARGGERLPSLLGLTFPAGDIPEEARRLFRLAQVRVIVDVEAQS RSISQPESWGLSARVPLGEPLQRPVDPCHVHYLKSMGVASSLVVPLMHHQELWGLLVSHHAEPRPYSQEELQVVQLLADQ VSIAIAQAEL ; _struct_ref.pdbx_align_begin 31 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KOI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2JIZ5 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 200 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 200 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KOI SER A 171 ? UNP Q2JIZ5 ? ? 'EXPRESSION TAG' 201 1 1 2KOI LEU A 172 ? UNP Q2JIZ5 ? ? 'EXPRESSION TAG' 202 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYC non-polymer . PHYCOCYANOBILIN ? 'C33 H40 N4 O6' 588.694 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCO' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HNCACB' 1 5 1 '3D C(CO)NH' 1 6 1 '3D H(CCO)NH' 1 7 1 '3D HCCH-TOCSY' 1 8 1 '3D 1H-15N NOESY' 1 9 1 '3D 1H-13C NOESY' 2 10 5 '3D HNCO ANTIPHASE' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 10 8.5 ambient ? 298 K 2 10 8.5 ambient ? 306 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1.7 mM [U-13C; U-15N] SYB-CPH1(GAF), 1.7 mM PHYCOCYANOBILIN, 10 mM [U-2H] TRIS-DCL, 0.03 % sodium azide, 93% H2O/7% D2O' 1 '93% H2O/7% D2O' '2 mM SYB-CPH1(GAF), 2 mM [U-15N] PHYCOCYANOBILIN, 10 mM [U-2H] TRIS-DCL, 0.03 % sodium azide, 93% H2O/7% D2O' 2 '93% H2O/7% D2O' '1 mM SYB-CPH1(GAF), 1 mM [U-13C] PHYCOCYANOBILIN, 10 mM [U-2H] TRIS-DCL, 0.03 % sodium azide, 100% D2O' 3 '100% D2O' '1 mM [U-13C; U-15N] SYB-CPH1(GAF), 1 mM PHYCOCYANOBILIN, 10 mM [U-2H] TRIS-DCL, 0.03 % sodium azide-16, 93% H2O/7% D2O' 4 '93% H2O/7% D2O' '0.5 mM SYB-CPH1(GAF), 0.5 mM [U-13C] PHYCOCYANOBILIN, 10 mM [U-2H] TRIS-DCL, 0.03 % sodium azide, 93% H2O/7% D2O' 5 '93% H2O/7% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian INOVA 1 'Varian INOVA' 600 Varian INOVA 2 'Varian INOVA' 600 Bruker DMX 3 'Bruker DMX' 750 Bruker DMX 4 'Bruker DMX' # _pdbx_nmr_refine.entry_id 2KOI _pdbx_nmr_refine.method 'torsion angle molecular dynamics, internal variable dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KOI _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KOI _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRPipe ? 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRDraw ? 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'peak picking' NMRDraw ? 4 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'chemical shift assignment' NMRDraw ? 5 Garrett 'data analysis' PIPP ? 6 Garrett 'peak picking' PIPP ? 7 Garrett 'chemical shift assignment' PIPP ? 8 'Schwieters, Kuszewski, Tjandra and Clore' 'geometry optimization' X-PLOR_NIH ? 9 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' X-PLOR_NIH ? 10 'Schwieters, Kuszewski, Tjandra and Clore' refinement X-PLOR_NIH ? 11 Varian collection VNMRJ ? 12 'Koradi, Billeter and Wuthrich' 'data analysis' Molmol ? 13 'Laskowski and MacArthur' 'data analysis' ProcheckNMR ? 14 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KOI _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KOI _struct.title 'Refined solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state' _struct.pdbx_descriptor 'Sensor protein (E.C.2.7.13.3)' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KOI _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;PHYTOCHROME, GAF DOMAIN, PHYCOCYANOBILIN, PCB, BACTERIOPHYTOCHROME, CYANOBACTERIAL PHYTOCHROME, KINASE, PHOSPHOPROTEIN, TRANSFERASE, PROTEIN STRUCTURE INITIATIVE, PSI-2, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG, STRUCTURAL GENOMICS ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 1 ? GLY A 17 ? LEU A 31 GLY A 47 1 ? 17 HELX_P HELX_P2 2 PRO A 53 ? ILE A 57 ? PRO A 83 ILE A 87 5 ? 5 HELX_P HELX_P3 3 GLU A 59 ? ALA A 68 ? GLU A 89 ALA A 98 1 ? 10 HELX_P HELX_P4 4 GLY A 90 ? VAL A 95 ? GLY A 120 VAL A 125 5 ? 6 HELX_P HELX_P5 5 ASP A 106 ? SER A 115 ? ASP A 136 SER A 145 1 ? 10 HELX_P HELX_P6 6 SER A 147 ? LEU A 172 ? SER A 177 LEU A 202 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 108 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYC _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id CAC _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 138 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYC _struct_conn.ptnr2_auth_seq_id 203 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.838 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 51 ? PHE A 52 ? THR A 81 PHE A 82 A 2 GLY A 32 ? ARG A 39 ? GLY A 62 ARG A 69 A 3 ARG A 20 ? PHE A 26 ? ARG A 50 PHE A 56 A 4 GLU A 131 ? HIS A 140 ? GLU A 161 HIS A 170 A 5 SER A 120 ? HIS A 128 ? SER A 150 HIS A 158 A 6 ARG A 71 ? VAL A 72 ? ARG A 101 VAL A 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 52 ? O PHE A 82 N GLY A 32 ? N GLY A 62 A 2 3 O ALA A 36 ? O ALA A 66 N VAL A 23 ? N VAL A 53 A 3 4 N PHE A 26 ? N PHE A 56 O TRP A 133 ? O TRP A 163 A 4 5 O LEU A 136 ? O LEU A 166 N VAL A 124 ? N VAL A 154 A 5 6 O VAL A 123 ? O VAL A 153 N ARG A 71 ? N ARG A 101 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE CYC A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 LYS A 22 ? LYS A 52 . ? 1_555 ? 2 AC1 14 TYR A 24 ? TYR A 54 . ? 1_555 ? 3 AC1 14 PHE A 52 ? PHE A 82 . ? 1_555 ? 4 AC1 14 ILE A 57 ? ILE A 87 . ? 1_555 ? 5 AC1 14 PRO A 58 ? PRO A 88 . ? 1_555 ? 6 AC1 14 ALA A 61 ? ALA A 91 . ? 1_555 ? 7 AC1 14 PHE A 65 ? PHE A 95 . ? 1_555 ? 8 AC1 14 ARG A 71 ? ARG A 101 . ? 1_555 ? 9 AC1 14 PRO A 104 ? PRO A 134 . ? 1_555 ? 10 AC1 14 VAL A 105 ? VAL A 135 . ? 1_555 ? 11 AC1 14 ASP A 106 ? ASP A 136 . ? 1_555 ? 12 AC1 14 CYS A 108 ? CYS A 138 . ? 1_555 ? 13 AC1 14 HIS A 109 ? HIS A 139 . ? 1_555 ? 14 AC1 14 LEU A 135 ? LEU A 165 . ? 1_555 ? # _atom_sites.entry_id 2KOI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 31 31 LEU LEU A . n A 1 2 ASP 2 32 32 ASP ASP A . n A 1 3 GLN 3 33 33 GLN GLN A . n A 1 4 ILE 4 34 34 ILE ILE A . n A 1 5 LEU 5 35 35 LEU LEU A . n A 1 6 ARG 6 36 36 ARG ARG A . n A 1 7 ALA 7 37 37 ALA ALA A . n A 1 8 THR 8 38 38 THR THR A . n A 1 9 VAL 9 39 39 VAL VAL A . n A 1 10 GLU 10 40 40 GLU GLU A . n A 1 11 GLU 11 41 41 GLU GLU A . n A 1 12 VAL 12 42 42 VAL VAL A . n A 1 13 ARG 13 43 43 ARG ARG A . n A 1 14 ALA 14 44 44 ALA ALA A . n A 1 15 PHE 15 45 45 PHE PHE A . n A 1 16 LEU 16 46 46 LEU LEU A . n A 1 17 GLY 17 47 47 GLY GLY A . n A 1 18 THR 18 48 48 THR THR A . n A 1 19 ASP 19 49 49 ASP ASP A . n A 1 20 ARG 20 50 50 ARG ARG A . n A 1 21 VAL 21 51 51 VAL VAL A . n A 1 22 LYS 22 52 52 LYS LYS A . n A 1 23 VAL 23 53 53 VAL VAL A . n A 1 24 TYR 24 54 54 TYR TYR A . n A 1 25 ARG 25 55 55 ARG ARG A . n A 1 26 PHE 26 56 56 PHE PHE A . n A 1 27 ASP 27 57 57 ASP ASP A . n A 1 28 PRO 28 58 58 PRO PRO A . n A 1 29 GLU 29 59 59 GLU GLU A . n A 1 30 GLY 30 60 60 GLY GLY A . n A 1 31 HIS 31 61 61 HIS HIS A . n A 1 32 GLY 32 62 62 GLY GLY A . n A 1 33 THR 33 63 63 THR THR A . n A 1 34 VAL 34 64 64 VAL VAL A . n A 1 35 VAL 35 65 65 VAL VAL A . n A 1 36 ALA 36 66 66 ALA ALA A . n A 1 37 GLU 37 67 67 GLU GLU A . n A 1 38 ALA 38 68 68 ALA ALA A . n A 1 39 ARG 39 69 69 ARG ARG A . n A 1 40 GLY 40 70 70 GLY GLY A . n A 1 41 GLY 41 71 71 GLY GLY A . n A 1 42 GLU 42 72 72 GLU GLU A . n A 1 43 ARG 43 73 73 ARG ARG A . n A 1 44 LEU 44 74 74 LEU LEU A . n A 1 45 PRO 45 75 75 PRO PRO A . n A 1 46 SER 46 76 76 SER SER A . n A 1 47 LEU 47 77 77 LEU LEU A . n A 1 48 LEU 48 78 78 LEU LEU A . n A 1 49 GLY 49 79 79 GLY GLY A . n A 1 50 LEU 50 80 80 LEU LEU A . n A 1 51 THR 51 81 81 THR THR A . n A 1 52 PHE 52 82 82 PHE PHE A . n A 1 53 PRO 53 83 83 PRO PRO A . n A 1 54 ALA 54 84 84 ALA ALA A . n A 1 55 GLY 55 85 85 GLY GLY A . n A 1 56 ASP 56 86 86 ASP ASP A . n A 1 57 ILE 57 87 87 ILE ILE A . n A 1 58 PRO 58 88 88 PRO PRO A . n A 1 59 GLU 59 89 89 GLU GLU A . n A 1 60 GLU 60 90 90 GLU GLU A . n A 1 61 ALA 61 91 91 ALA ALA A . n A 1 62 ARG 62 92 92 ARG ARG A . n A 1 63 ARG 63 93 93 ARG ARG A . n A 1 64 LEU 64 94 94 LEU LEU A . n A 1 65 PHE 65 95 95 PHE PHE A . n A 1 66 ARG 66 96 96 ARG ARG A . n A 1 67 LEU 67 97 97 LEU LEU A . n A 1 68 ALA 68 98 98 ALA ALA A . n A 1 69 GLN 69 99 99 GLN GLN A . n A 1 70 VAL 70 100 100 VAL VAL A . n A 1 71 ARG 71 101 101 ARG ARG A . n A 1 72 VAL 72 102 102 VAL VAL A . n A 1 73 ILE 73 103 103 ILE ILE A . n A 1 74 VAL 74 104 104 VAL VAL A . n A 1 75 ASP 75 105 105 ASP ASP A . n A 1 76 VAL 76 106 106 VAL VAL A . n A 1 77 GLU 77 107 107 GLU GLU A . n A 1 78 ALA 78 108 108 ALA ALA A . n A 1 79 GLN 79 109 109 GLN GLN A . n A 1 80 SER 80 110 110 SER SER A . n A 1 81 ARG 81 111 111 ARG ARG A . n A 1 82 SER 82 112 112 SER SER A . n A 1 83 ILE 83 113 113 ILE ILE A . n A 1 84 SER 84 114 114 SER SER A . n A 1 85 GLN 85 115 115 GLN GLN A . n A 1 86 PRO 86 116 116 PRO PRO A . n A 1 87 GLU 87 117 117 GLU GLU A . n A 1 88 SER 88 118 118 SER SER A . n A 1 89 TRP 89 119 119 TRP TRP A . n A 1 90 GLY 90 120 120 GLY GLY A . n A 1 91 LEU 91 121 121 LEU LEU A . n A 1 92 SER 92 122 122 SER SER A . n A 1 93 ALA 93 123 123 ALA ALA A . n A 1 94 ARG 94 124 124 ARG ARG A . n A 1 95 VAL 95 125 125 VAL VAL A . n A 1 96 PRO 96 126 126 PRO PRO A . n A 1 97 LEU 97 127 127 LEU LEU A . n A 1 98 GLY 98 128 128 GLY GLY A . n A 1 99 GLU 99 129 129 GLU GLU A . n A 1 100 PRO 100 130 130 PRO PRO A . n A 1 101 LEU 101 131 131 LEU LEU A . n A 1 102 GLN 102 132 132 GLN GLN A . n A 1 103 ARG 103 133 133 ARG ARG A . n A 1 104 PRO 104 134 134 PRO PRO A . n A 1 105 VAL 105 135 135 VAL VAL A . n A 1 106 ASP 106 136 136 ASP ASP A . n A 1 107 PRO 107 137 137 PRO PRO A . n A 1 108 CYS 108 138 138 CYS CYS A . n A 1 109 HIS 109 139 139 HIS HIS A . n A 1 110 VAL 110 140 140 VAL VAL A . n A 1 111 HIS 111 141 141 HIS HIS A . n A 1 112 TYR 112 142 142 TYR TYR A . n A 1 113 LEU 113 143 143 LEU LEU A . n A 1 114 LYS 114 144 144 LYS LYS A . n A 1 115 SER 115 145 145 SER SER A . n A 1 116 MET 116 146 146 MET MET A . n A 1 117 GLY 117 147 147 GLY GLY A . n A 1 118 VAL 118 148 148 VAL VAL A . n A 1 119 ALA 119 149 149 ALA ALA A . n A 1 120 SER 120 150 150 SER SER A . n A 1 121 SER 121 151 151 SER SER A . n A 1 122 LEU 122 152 152 LEU LEU A . n A 1 123 VAL 123 153 153 VAL VAL A . n A 1 124 VAL 124 154 154 VAL VAL A . n A 1 125 PRO 125 155 155 PRO PRO A . n A 1 126 LEU 126 156 156 LEU LEU A . n A 1 127 MET 127 157 157 MET MET A . n A 1 128 HIS 128 158 158 HIS HIS A . n A 1 129 HIS 129 159 159 HIS HIS A . n A 1 130 GLN 130 160 160 GLN GLN A . n A 1 131 GLU 131 161 161 GLU GLU A . n A 1 132 LEU 132 162 162 LEU LEU A . n A 1 133 TRP 133 163 163 TRP TRP A . n A 1 134 GLY 134 164 164 GLY GLY A . n A 1 135 LEU 135 165 165 LEU LEU A . n A 1 136 LEU 136 166 166 LEU LEU A . n A 1 137 VAL 137 167 167 VAL VAL A . n A 1 138 SER 138 168 168 SER SER A . n A 1 139 HIS 139 169 169 HIS HIS A . n A 1 140 HIS 140 170 170 HIS HIS A . n A 1 141 ALA 141 171 171 ALA ALA A . n A 1 142 GLU 142 172 172 GLU GLU A . n A 1 143 PRO 143 173 173 PRO PRO A . n A 1 144 ARG 144 174 174 ARG ARG A . n A 1 145 PRO 145 175 175 PRO PRO A . n A 1 146 TYR 146 176 176 TYR TYR A . n A 1 147 SER 147 177 177 SER SER A . n A 1 148 GLN 148 178 178 GLN GLN A . n A 1 149 GLU 149 179 179 GLU GLU A . n A 1 150 GLU 150 180 180 GLU GLU A . n A 1 151 LEU 151 181 181 LEU LEU A . n A 1 152 GLN 152 182 182 GLN GLN A . n A 1 153 VAL 153 183 183 VAL VAL A . n A 1 154 VAL 154 184 184 VAL VAL A . n A 1 155 GLN 155 185 185 GLN GLN A . n A 1 156 LEU 156 186 186 LEU LEU A . n A 1 157 LEU 157 187 187 LEU LEU A . n A 1 158 ALA 158 188 188 ALA ALA A . n A 1 159 ASP 159 189 189 ASP ASP A . n A 1 160 GLN 160 190 190 GLN GLN A . n A 1 161 VAL 161 191 191 VAL VAL A . n A 1 162 SER 162 192 192 SER SER A . n A 1 163 ILE 163 193 193 ILE ILE A . n A 1 164 ALA 164 194 194 ALA ALA A . n A 1 165 ILE 165 195 195 ILE ILE A . n A 1 166 ALA 166 196 196 ALA ALA A . n A 1 167 GLN 167 197 197 GLN GLN A . n A 1 168 ALA 168 198 198 ALA ALA A . n A 1 169 GLU 169 199 199 GLU GLU A . n A 1 170 LEU 170 200 200 LEU LEU A . n A 1 171 SER 171 201 201 SER SER A . n A 1 172 LEU 172 202 202 LEU LEU A . n # _pdbx_SG_project.full_name_of_center 'Center for Eukaryotic Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center CESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id CYC _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 203 _pdbx_nonpoly_scheme.auth_seq_num 138 _pdbx_nonpoly_scheme.pdb_mon_id CYC _pdbx_nonpoly_scheme.auth_mon_id CYC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-03 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'SYB-CPH1(GAF)-1' 1.7 ? mM '[U-13C; U-15N]' 1 PHYCOCYANOBILIN-2 1.7 ? mM ? 1 TRIS-DCL-3 10 ? mM '[U-2H]' 1 'sodium azide-4' 0.03 ? % ? 1 'SYB-CPH1(GAF)-5' 2 ? mM ? 2 PHYCOCYANOBILIN-6 2 ? mM '[U-15N]' 2 TRIS-DCL-7 10 ? mM '[U-2H]' 2 'sodium azide-8' 0.03 ? % ? 2 'SYB-CPH1(GAF)-9' 1 ? mM ? 3 PHYCOCYANOBILIN-10 1 ? mM '[U-13C]' 3 TRIS-DCL-11 10 ? mM '[U-2H]' 3 'sodium azide-12' 0.03 ? % ? 3 'SYB-CPH1(GAF)-13' 1 ? mM '[U-13C; U-15N]' 4 PHYCOCYANOBILIN-14 1 ? mM ? 4 TRIS-DCL-15 10 ? mM '[U-2H]' 4 'sodium azide-16' 0.03 ? % ? 4 'SYB-CPH1(GAF)-17' 0.5 ? mM ? 5 PHYCOCYANOBILIN-18 0.5 ? mM '[U-13C]' 5 TRIS-DCL-19 10 ? mM '[U-2H]' 5 'sodium azide-20' 0.03 ? % ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 188 ? ? H A SER 192 ? ? 1.48 2 1 O A HIS 141 ? ? H A SER 145 ? ? 1.54 3 1 H A PHE 56 ? ? O A TRP 163 ? ? 1.57 4 2 O A HIS 141 ? ? H A SER 145 ? ? 1.53 5 2 H A ASP 57 ? ? O A HIS 61 ? ? 1.53 6 2 O A ALA 188 ? ? H A SER 192 ? ? 1.54 7 2 O A LEU 186 ? ? H A GLN 190 ? ? 1.57 8 3 O A HIS 141 ? ? H A SER 145 ? ? 1.53 9 3 O A ALA 188 ? ? H A SER 192 ? ? 1.54 10 3 O A ARG 43 ? ? H A GLY 47 ? ? 1.57 11 3 H A ASP 57 ? ? O A HIS 61 ? ? 1.58 12 4 HG A SER 112 ? ? H A ASP 136 ? ? 1.32 13 4 O A ALA 188 ? ? H A SER 192 ? ? 1.52 14 4 O A LEU 186 ? ? H A GLN 190 ? ? 1.52 15 4 O A GLY 70 ? ? H A GLU 72 ? ? 1.52 16 4 O A HIS 141 ? ? H A SER 145 ? ? 1.57 17 4 O A ARG 43 ? ? H A GLY 47 ? ? 1.60 18 4 O A ASP 57 ? ? H A GLY 60 ? ? 1.60 19 5 O A ALA 188 ? ? H A SER 192 ? ? 1.47 20 5 O A ARG 43 ? ? H A GLY 47 ? ? 1.50 21 5 O A HIS 141 ? ? H A SER 145 ? ? 1.52 22 5 O A LEU 186 ? ? H A GLN 190 ? ? 1.53 23 5 H A ASP 57 ? ? O A HIS 61 ? ? 1.56 24 6 HZ1 A LYS 52 ? ? HE2 A HIS 169 ? ? 1.28 25 6 O A ALA 188 ? ? H A SER 192 ? ? 1.49 26 6 O A LEU 186 ? ? H A GLN 190 ? ? 1.53 27 6 O A HIS 141 ? ? H A SER 145 ? ? 1.56 28 7 HH22 A ARG 101 ? ? HH21 A ARG 133 ? ? 1.28 29 7 O A HIS 141 ? ? H A SER 145 ? ? 1.50 30 7 O A GLY 70 ? ? H A GLU 72 ? ? 1.51 31 7 O A LEU 186 ? ? H A GLN 190 ? ? 1.55 32 7 O A ARG 43 ? ? H A GLY 47 ? ? 1.55 33 7 O A ALA 188 ? ? H A SER 192 ? ? 1.58 34 7 H A ASP 57 ? ? O A HIS 61 ? ? 1.60 35 8 O A LEU 186 ? ? H A GLN 190 ? ? 1.53 36 8 H A ASP 57 ? ? O A HIS 61 ? ? 1.53 37 8 O A HIS 141 ? ? H A SER 145 ? ? 1.53 38 8 O A ALA 188 ? ? H A SER 192 ? ? 1.55 39 8 O A ARG 43 ? ? H A GLY 47 ? ? 1.57 40 8 O A ALA 84 ? ? H A ILE 87 ? ? 1.58 41 8 OE1 A GLU 67 ? ? H A LEU 77 ? ? 1.59 42 9 O A ALA 188 ? ? H A SER 192 ? ? 1.54 43 9 H A ASP 57 ? ? O A HIS 61 ? ? 1.56 44 9 O A LEU 186 ? ? H A GLN 190 ? ? 1.57 45 9 O A ARG 43 ? ? H A GLY 47 ? ? 1.59 46 10 HH21 A ARG 96 ? ? H A LEU 162 ? ? 1.26 47 10 O A GLY 70 ? ? H A GLU 72 ? ? 1.48 48 10 O A ALA 188 ? ? H A SER 192 ? ? 1.49 49 10 O A HIS 141 ? ? H A SER 145 ? ? 1.52 50 10 O A ARG 43 ? ? H A GLY 47 ? ? 1.59 51 10 H A ASP 57 ? ? O A HIS 61 ? ? 1.59 52 11 H A PHE 56 ? ? O A TRP 163 ? ? 1.50 53 11 O A HIS 141 ? ? H A SER 145 ? ? 1.50 54 11 O A ALA 188 ? ? H A SER 192 ? ? 1.51 55 11 O A GLN 182 ? ? H A LEU 186 ? ? 1.57 56 11 O A ARG 43 ? ? H A GLY 47 ? ? 1.59 57 12 H A ASP 57 ? ? O A HIS 61 ? ? 1.54 58 12 O A HIS 141 ? ? H A SER 145 ? ? 1.55 59 12 O A ALA 188 ? ? H A SER 192 ? ? 1.55 60 13 O A ALA 188 ? ? H A SER 192 ? ? 1.50 61 13 O A HIS 141 ? ? H A SER 145 ? ? 1.52 62 13 H A ASP 57 ? ? O A HIS 61 ? ? 1.54 63 13 O A LEU 186 ? ? H A GLN 190 ? ? 1.57 64 14 O A ALA 188 ? ? H A SER 192 ? ? 1.48 65 14 O A HIS 141 ? ? H A SER 145 ? ? 1.54 66 15 H A ASP 57 ? ? O A HIS 61 ? ? 1.53 67 15 O A LEU 186 ? ? H A GLN 190 ? ? 1.56 68 15 O A ARG 43 ? ? H A GLY 47 ? ? 1.57 69 15 O A HIS 141 ? ? H A SER 145 ? ? 1.57 70 15 O A VAL 184 ? ? H A ALA 188 ? ? 1.60 71 16 O A LEU 186 ? ? H A GLN 190 ? ? 1.54 72 16 O A ALA 188 ? ? H A SER 192 ? ? 1.55 73 16 H A ASP 57 ? ? O A HIS 61 ? ? 1.55 74 16 O A HIS 141 ? ? H A SER 145 ? ? 1.55 75 16 O A VAL 184 ? ? H A ALA 188 ? ? 1.58 76 17 O A LEU 186 ? ? H A GLN 190 ? ? 1.47 77 17 O A HIS 141 ? ? H A SER 145 ? ? 1.50 78 17 HE A ARG 50 ? ? OE2 A GLU 67 ? ? 1.55 79 17 O A ARG 43 ? ? H A GLY 47 ? ? 1.57 80 17 H A ASP 57 ? ? O A HIS 61 ? ? 1.58 81 18 O A HIS 141 ? ? H A SER 145 ? ? 1.55 82 18 O A ALA 188 ? ? H A SER 192 ? ? 1.55 83 18 H A ASP 57 ? ? O A HIS 61 ? ? 1.57 84 18 O A ARG 43 ? ? H A GLY 47 ? ? 1.58 85 19 O A HIS 141 ? ? H A SER 145 ? ? 1.51 86 19 O A ALA 188 ? ? H A SER 192 ? ? 1.57 87 19 O A LEU 186 ? ? H A GLN 190 ? ? 1.60 88 19 O A LEU 94 ? ? H A ALA 98 ? ? 1.60 89 20 O A LEU 186 ? ? H A GLN 190 ? ? 1.47 90 20 H A ASP 57 ? ? O A HIS 61 ? ? 1.52 91 20 O A HIS 141 ? ? H A SER 145 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 72 ? ? 53.60 17.91 2 1 PRO A 88 ? ? -45.63 -115.84 3 1 GLU A 89 ? ? -157.00 -51.68 4 1 PRO A 116 ? ? -36.79 -25.71 5 1 ARG A 124 ? ? -45.92 -14.39 6 1 LEU A 127 ? ? 39.27 -110.88 7 1 PRO A 130 ? ? -41.65 168.42 8 1 LEU A 131 ? ? -63.07 11.06 9 1 ASP A 136 ? ? -41.68 160.86 10 1 HIS A 159 ? ? 58.34 -122.47 11 1 ARG A 174 ? ? -164.40 80.98 12 2 GLU A 72 ? ? -59.94 6.04 13 2 PRO A 88 ? ? -39.60 -97.75 14 2 GLU A 89 ? ? -165.71 -39.86 15 2 VAL A 100 ? ? -168.80 107.38 16 2 GLU A 117 ? ? 56.88 102.87 17 2 TRP A 119 ? ? -152.83 -19.60 18 2 LEU A 121 ? ? 56.90 3.18 19 2 ARG A 124 ? ? -49.33 -3.62 20 2 LEU A 127 ? ? 50.11 -117.88 21 2 PRO A 130 ? ? -42.97 173.35 22 2 LEU A 131 ? ? -64.17 14.46 23 2 PRO A 137 ? ? -37.80 -20.71 24 2 HIS A 159 ? ? 60.17 -122.04 25 2 ARG A 174 ? ? -172.91 81.62 26 3 GLU A 72 ? ? 57.41 0.67 27 3 PRO A 88 ? ? -39.18 -95.43 28 3 GLU A 89 ? ? -162.91 -46.90 29 3 VAL A 106 ? ? -49.66 -19.74 30 3 GLU A 117 ? ? 59.61 84.55 31 3 LEU A 121 ? ? -71.66 35.52 32 3 ARG A 124 ? ? -45.79 -14.21 33 3 LEU A 127 ? ? 59.22 -80.93 34 3 PRO A 130 ? ? -40.97 167.76 35 3 LEU A 131 ? ? -57.84 9.96 36 3 PRO A 137 ? ? -37.91 -17.56 37 3 HIS A 159 ? ? 61.79 -123.56 38 4 GLU A 72 ? ? 26.34 44.10 39 4 PRO A 88 ? ? -75.70 -92.65 40 4 GLU A 89 ? ? -167.58 -37.70 41 4 PRO A 116 ? ? -37.74 87.62 42 4 GLU A 117 ? ? 44.57 94.92 43 4 SER A 118 ? ? -157.31 0.36 44 4 LEU A 127 ? ? 44.68 -107.43 45 4 LEU A 131 ? ? -47.69 -12.73 46 4 PRO A 137 ? ? -39.08 -35.79 47 4 HIS A 159 ? ? 58.38 -125.44 48 5 GLU A 72 ? ? -61.67 11.26 49 5 PRO A 88 ? ? -40.38 -84.80 50 5 GLU A 89 ? ? -172.41 -30.89 51 5 PRO A 116 ? ? -35.81 -27.33 52 5 GLU A 117 ? ? -144.58 -128.02 53 5 SER A 118 ? ? 60.90 82.43 54 5 LEU A 127 ? ? 56.32 -79.90 55 5 LEU A 131 ? ? -63.48 12.47 56 5 PRO A 137 ? ? -37.67 -25.40 57 5 HIS A 159 ? ? 61.98 -123.64 58 5 ARG A 174 ? ? -162.87 94.61 59 6 GLU A 72 ? ? 49.65 15.56 60 6 PRO A 88 ? ? -76.39 -89.04 61 6 GLU A 89 ? ? -170.01 -31.40 62 6 PRO A 116 ? ? -36.64 129.61 63 6 GLU A 117 ? ? 58.06 120.98 64 6 ARG A 124 ? ? -64.92 -139.74 65 6 LEU A 127 ? ? 61.11 -108.96 66 6 PRO A 130 ? ? -41.52 167.16 67 6 LEU A 131 ? ? -59.27 9.36 68 6 ASP A 136 ? ? -45.03 157.27 69 6 HIS A 159 ? ? 57.40 -118.88 70 7 GLU A 72 ? ? 37.73 33.82 71 7 PRO A 88 ? ? -70.71 -94.40 72 7 GLU A 89 ? ? -165.17 -38.16 73 7 VAL A 100 ? ? -163.83 114.49 74 7 PRO A 116 ? ? -37.17 -26.45 75 7 LEU A 121 ? ? -90.41 38.56 76 7 ARG A 124 ? ? 51.08 102.66 77 7 PRO A 126 ? ? -40.58 158.97 78 7 LEU A 127 ? ? 46.59 -102.95 79 7 PRO A 137 ? ? -37.36 -25.92 80 7 HIS A 159 ? ? 61.84 -123.73 81 8 GLU A 72 ? ? 46.66 16.23 82 8 PRO A 75 ? ? -50.59 170.67 83 8 PRO A 88 ? ? -73.45 -97.32 84 8 GLU A 89 ? ? -163.89 -40.10 85 8 PRO A 116 ? ? -40.37 -13.90 86 8 GLU A 117 ? ? 60.49 -95.05 87 8 SER A 118 ? ? 44.21 23.19 88 8 LEU A 127 ? ? 59.46 -117.98 89 8 LEU A 131 ? ? -58.36 9.23 90 8 PRO A 137 ? ? -38.32 -23.98 91 8 HIS A 159 ? ? 62.89 -125.40 92 9 GLU A 72 ? ? 52.80 12.04 93 9 PRO A 88 ? ? -77.59 -98.77 94 9 GLU A 89 ? ? -163.47 -27.46 95 9 VAL A 100 ? ? -169.33 117.10 96 9 ARG A 101 ? ? -173.77 131.14 97 9 VAL A 106 ? ? -47.71 -17.74 98 9 ARG A 124 ? ? -58.32 -151.97 99 9 LEU A 127 ? ? 59.60 -112.83 100 9 PRO A 130 ? ? -41.65 168.73 101 9 LEU A 131 ? ? -62.72 12.11 102 9 HIS A 159 ? ? 71.67 -128.12 103 10 GLU A 72 ? ? 37.27 35.26 104 10 PRO A 88 ? ? -74.47 -100.33 105 10 GLU A 89 ? ? -163.71 -53.20 106 10 GLU A 117 ? ? -74.77 -85.32 107 10 LEU A 127 ? ? 59.03 -105.84 108 10 PRO A 130 ? ? -41.28 166.32 109 10 LEU A 131 ? ? -59.71 10.81 110 10 PRO A 137 ? ? -37.34 -19.79 111 10 HIS A 159 ? ? 59.05 -120.37 112 11 GLU A 72 ? ? 47.74 13.42 113 11 PRO A 88 ? ? -74.52 -88.86 114 11 GLU A 89 ? ? -170.15 -36.28 115 11 GLU A 117 ? ? -117.19 -165.69 116 11 SER A 118 ? ? 79.72 115.82 117 11 TRP A 119 ? ? -170.04 97.05 118 11 LEU A 127 ? ? 59.00 -77.54 119 11 LEU A 131 ? ? -61.06 13.47 120 11 PRO A 137 ? ? -35.93 -20.08 121 11 HIS A 159 ? ? 64.63 -126.56 122 11 ARG A 174 ? ? -165.48 78.32 123 12 PRO A 75 ? ? -49.56 157.39 124 12 PRO A 88 ? ? -76.28 -111.96 125 12 GLU A 89 ? ? -151.57 -51.23 126 12 VAL A 100 ? ? -168.54 114.70 127 12 GLU A 117 ? ? 58.78 141.86 128 12 SER A 118 ? ? -86.06 -85.43 129 12 LEU A 121 ? ? -136.11 -45.73 130 12 ARG A 124 ? ? -35.74 119.02 131 12 LEU A 127 ? ? 167.58 131.76 132 12 ASP A 136 ? ? -40.90 156.57 133 12 HIS A 159 ? ? 69.73 -126.70 134 12 ARG A 174 ? ? -164.83 78.20 135 13 PRO A 88 ? ? -76.59 -96.58 136 13 GLU A 89 ? ? -162.72 -28.91 137 13 PRO A 116 ? ? -36.87 88.38 138 13 GLU A 117 ? ? -161.59 -82.10 139 13 ARG A 124 ? ? -39.18 -72.31 140 13 LEU A 127 ? ? 60.83 -116.16 141 13 LEU A 131 ? ? -57.99 6.72 142 13 PRO A 137 ? ? -36.22 -25.79 143 13 HIS A 159 ? ? 55.86 -118.08 144 13 ARG A 174 ? ? -172.93 127.38 145 14 GLU A 72 ? ? -61.69 11.10 146 14 PRO A 88 ? ? -72.57 -96.05 147 14 GLU A 89 ? ? -164.19 -42.85 148 14 PRO A 116 ? ? -35.23 156.70 149 14 SER A 118 ? ? 41.16 20.82 150 14 ARG A 124 ? ? 61.02 -143.56 151 14 LEU A 127 ? ? 53.75 -132.87 152 14 PRO A 137 ? ? -36.32 -26.67 153 14 HIS A 159 ? ? 57.00 -120.87 154 14 PRO A 173 ? ? -54.62 -80.68 155 14 ARG A 174 ? ? 46.97 90.86 156 15 PRO A 58 ? ? -49.50 -18.68 157 15 GLU A 72 ? ? 42.58 20.05 158 15 PRO A 88 ? ? -39.50 -95.93 159 15 GLU A 89 ? ? -163.67 -42.51 160 15 ARG A 124 ? ? -68.69 4.33 161 15 LEU A 127 ? ? 54.72 -109.02 162 15 LEU A 131 ? ? -49.35 -4.67 163 15 PRO A 137 ? ? -37.86 -31.02 164 15 HIS A 159 ? ? 56.62 -126.52 165 15 ARG A 174 ? ? -178.76 149.41 166 16 PRO A 88 ? ? -73.60 -103.22 167 16 GLU A 89 ? ? -159.66 -40.77 168 16 SER A 118 ? ? -55.29 96.61 169 16 LEU A 127 ? ? 44.79 -118.79 170 16 PRO A 137 ? ? -36.97 -21.42 171 16 HIS A 159 ? ? 59.65 -118.10 172 16 PRO A 173 ? ? -61.44 -92.01 173 16 ARG A 174 ? ? 58.76 124.89 174 17 GLU A 72 ? ? 42.64 19.37 175 17 PRO A 75 ? ? -49.38 161.87 176 17 PRO A 88 ? ? -74.16 -102.55 177 17 GLU A 89 ? ? -157.84 -43.26 178 17 TRP A 119 ? ? -155.34 -139.70 179 17 LEU A 121 ? ? 54.93 4.87 180 17 ARG A 124 ? ? -46.75 -19.17 181 17 LEU A 127 ? ? 43.57 -123.03 182 17 LEU A 131 ? ? -59.89 3.06 183 17 PRO A 137 ? ? -38.28 -18.84 184 17 HIS A 159 ? ? 56.72 -118.57 185 18 GLU A 72 ? ? -58.86 4.92 186 18 PRO A 88 ? ? -44.77 -114.68 187 18 GLU A 89 ? ? -147.11 -58.88 188 18 SER A 118 ? ? 62.98 125.02 189 18 LEU A 127 ? ? 44.75 -92.49 190 18 PRO A 130 ? ? -41.54 165.19 191 18 LEU A 131 ? ? -59.92 12.38 192 18 ASP A 136 ? ? -42.08 157.60 193 18 HIS A 159 ? ? 59.72 -121.21 194 18 ARG A 174 ? ? -173.19 114.16 195 19 GLU A 72 ? ? -58.43 3.39 196 19 PRO A 88 ? ? -72.58 -99.42 197 19 GLU A 89 ? ? -159.25 -47.58 198 19 LEU A 121 ? ? 57.93 71.19 199 19 ARG A 124 ? ? -64.67 -143.43 200 19 LEU A 127 ? ? 61.70 -112.71 201 19 PRO A 130 ? ? -42.62 162.44 202 19 LEU A 131 ? ? -54.59 3.55 203 19 PRO A 137 ? ? -37.41 -23.46 204 19 HIS A 159 ? ? 58.54 -120.73 205 19 PRO A 173 ? ? -41.74 150.07 206 19 ARG A 174 ? ? -173.38 88.33 207 20 GLU A 72 ? ? 50.32 16.98 208 20 PRO A 88 ? ? -74.64 -98.73 209 20 GLU A 89 ? ? -161.96 -50.72 210 20 ARG A 101 ? ? -170.81 139.81 211 20 LEU A 127 ? ? 51.26 -107.01 212 20 LEU A 131 ? ? -47.45 -8.86 213 20 PRO A 137 ? ? -39.21 -28.24 214 20 HIS A 159 ? ? 60.23 -120.84 215 20 PRO A 173 ? ? -69.08 -97.14 216 20 ARG A 174 ? ? 58.71 131.38 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name PHYCOCYANOBILIN _pdbx_entity_nonpoly.comp_id CYC #