HEADER HYDROLASE 07-OCT-09 2KP7 TITLE SOLUTION NMR STRUCTURE OF THE MUS81 N-TERMINAL HHH. NORTHEAST TITLE 2 STRUCTURAL GENOMICS CONSORTIUM TARGET MMT1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CROSSOVER JUNCTION ENDONUCLEASE MUS81; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 11-90; COMPND 5 EC: 3.1.22.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MUS81; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PGEX-2TK KEYWDS HELIX-HAIRPIN-HELIX, TUMOUR SUPPRESSOR, DNA DAMAGE, DNA KEYWDS 2 RECOMBINATION, DNA REPAIR, ENDONUCLEASE, HYDROLASE, MAGNESIUM, KEYWDS 3 METAL-BINDING, NUCLEASE, NUCLEUS, PHOSPHOPROTEIN, STRUCTURAL KEYWDS 4 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 5 GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.C.LAISTER,B.WU,A.LEMAK,G.T.MONTELIONE,C.H.ARROWSMITH,NORTHEAST AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 2 26-FEB-20 2KP7 1 REMARK SEQADV REVDAT 1 26-JAN-10 2KP7 0 JRNL AUTH R.C.LAISTER,S.DUAN,B.WU,N.HERZANYCH,G.T.MONTELIONE, JRNL AUTH 2 C.H.ARROWSMITH JRNL TITL SOLUTION NMR STRUCTURE AND DNA BINDING MODE OF THE MUS81 JRNL TITL 2 N-TERMINAL HELIX-HAIRPIN-HELIX DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KP7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000101400. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 500 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 MUS81 NTD, 25 MM SODIUM REMARK 210 PHOSPHATE, 500 MM SODIUM REMARK 210 CHLORIDE, 2 MM DTT, 2 MM REMARK 210 BENZAMIDINE, 0.5 MM PMSF, 0.5 MM REMARK 210 EDTA, 0.5 MM TCEP, 90% H2O/10% REMARK 210 D2O; 1 MM [U-100% 13C; U-100% REMARK 210 15N] MUS81 NTD, 25 MM SODIUM REMARK 210 PHOSPHATE, 500 MM SODIUM REMARK 210 CHLORIDE, 2 MM BENZAMIDINE, 2 MM REMARK 210 DTT, 0.5 MM EDTA, 0.5 MM PMSF, REMARK 210 0.5 MM TCEP, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCACB; 3D HBHA(CO)NH; REMARK 210 3D H(CCO)NH; 3D 1H-15N NOESY; 3D REMARK 210 CCH-TOCSY; 3D HCH-TOCSY; 3D 1H- REMARK 210 13C NOESY; 3D 1H-13C NOESY ARO; REMARK 210 CB-HD; CB-HE REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MDDGUI 1.0, XEASY, CYANA 2.1, REMARK 210 PSVS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 ARG A 6 REMARK 465 ARG A 7 REMARK 465 ALA A 8 REMARK 465 SER A 9 REMARK 465 VAL A 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 16 106.18 70.10 REMARK 500 1 PRO A 17 90.17 -57.05 REMARK 500 1 PRO A 19 159.00 -45.78 REMARK 500 2 CYS A 16 78.94 61.95 REMARK 500 2 LEU A 57 93.03 -66.60 REMARK 500 2 PHE A 69 -76.53 -75.54 REMARK 500 3 LEU A 57 70.40 54.97 REMARK 500 3 PHE A 69 -70.80 -71.43 REMARK 500 4 PRO A 14 79.97 -67.67 REMARK 500 4 ASN A 18 79.16 58.65 REMARK 500 4 PRO A 54 30.14 -87.19 REMARK 500 4 PRO A 56 97.17 -64.40 REMARK 500 4 PHE A 69 -74.09 -87.09 REMARK 500 6 PRO A 14 85.18 -65.12 REMARK 500 6 ASN A 18 165.59 72.14 REMARK 500 6 LEU A 20 -33.32 74.18 REMARK 500 6 PHE A 69 -80.21 -73.26 REMARK 500 7 LEU A 13 102.59 67.13 REMARK 500 7 PRO A 14 30.77 -81.98 REMARK 500 7 SER A 59 -52.74 -173.08 REMARK 500 8 PRO A 12 93.68 -66.37 REMARK 500 8 PHE A 69 -72.03 -75.21 REMARK 500 9 CYS A 16 144.18 67.69 REMARK 500 9 ASN A 18 104.05 -46.57 REMARK 500 9 PHE A 69 -76.55 -83.41 REMARK 500 10 PRO A 14 33.10 -84.51 REMARK 500 10 PRO A 17 91.49 -68.03 REMARK 500 10 LEU A 20 -52.12 76.63 REMARK 500 10 PRO A 54 37.19 -82.88 REMARK 500 10 PRO A 56 88.22 -67.43 REMARK 500 11 PRO A 12 -146.25 -79.43 REMARK 500 11 LEU A 13 85.82 66.73 REMARK 500 11 ASN A 18 -54.02 -168.21 REMARK 500 12 PRO A 12 41.65 -86.01 REMARK 500 13 PRO A 12 83.66 -69.06 REMARK 500 13 PRO A 14 107.90 -59.96 REMARK 500 13 PRO A 54 43.75 -83.99 REMARK 500 13 PRO A 56 89.30 -60.55 REMARK 500 13 PHE A 69 -81.62 -84.10 REMARK 500 14 ASN A 18 -46.85 -155.88 REMARK 500 15 CYS A 16 172.28 66.20 REMARK 500 15 ARG A 58 -61.04 71.12 REMARK 500 15 PHE A 69 -70.28 -71.46 REMARK 500 16 PRO A 14 49.52 -83.83 REMARK 500 16 PRO A 17 100.43 -58.66 REMARK 500 16 LEU A 20 -34.75 -171.40 REMARK 500 16 PRO A 54 32.04 -80.87 REMARK 500 16 PRO A 56 96.78 -67.65 REMARK 500 16 PHE A 69 -75.27 -83.39 REMARK 500 17 PRO A 17 80.12 -67.13 REMARK 500 REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT1A RELATED DB: TARGETDB REMARK 900 RELATED ID: 16549 RELATED DB: BMRB DBREF 2KP7 A 11 90 UNP Q91ZJ0 MUS81_MOUSE 11 90 SEQADV 2KP7 GLY A 4 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 SER A 5 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 ARG A 6 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 ARG A 7 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 ALA A 8 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 SER A 9 UNP Q91ZJ0 EXPRESSION TAG SEQADV 2KP7 VAL A 10 UNP Q91ZJ0 EXPRESSION TAG SEQRES 1 A 87 GLY SER ARG ARG ALA SER VAL ARG PRO LEU PRO VAL CYS SEQRES 2 A 87 PRO ASN PRO LEU PHE VAL ARG TRP LEU THR GLU TRP ARG SEQRES 3 A 87 ASP GLU ALA ALA SER ARG GLY ARG HIS THR ARG PHE VAL SEQRES 4 A 87 PHE GLN LYS ALA LEU ARG SER LEU GLN ARG TYR PRO LEU SEQRES 5 A 87 PRO LEU ARG SER GLY LYS GLU ALA LYS ILE LEU GLN HIS SEQRES 6 A 87 PHE GLY ASP ARG LEU CYS ARG MET LEU ASP GLU LYS LEU SEQRES 7 A 87 LYS GLN HIS LEU ALA SER GLY GLY ASP HELIX 1 1 PRO A 19 GLY A 36 1 18 HELIX 2 2 THR A 39 TYR A 53 1 15 HELIX 3 3 SER A 59 ILE A 65 1 7 HELIX 4 4 GLY A 70 GLY A 88 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1