HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-OCT-09 2KPQ TITLE NMR STRUCTURE OF AGROBACTERIUM TUMEFACIENS PROTEIN ATU1219: NORTHEAST TITLE 2 STRUCTURAL GENOMICS CONSORTIUM TARGET ATT14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR. C58; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58 / ATCC33970; SOURCE 5 GENE: AGR_C_2251, ATU1219; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET11 KEYWDS PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.R.CORT,A.YEE,C.H.ARROWSMITH,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 14-JUN-23 2KPQ 1 REMARK REVDAT 2 26-FEB-20 2KPQ 1 REMARK SEQADV REVDAT 1 08-DEC-09 2KPQ 0 JRNL AUTH J.R.CORT,A.YEE,C.H.ARROWSMITH,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL NMR STRUCTURE OF AGROBACTERIUM TUMEFACIENS PROTEIN ATU1219 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, PSVS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), BHATTACHARYA AND MONTELIONE (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000101419. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.45 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.9 MM [U-100% 13C; U-100% 15N] REMARK 210 ATU1219, 450 MM SODIUM CHLORIDE, REMARK 210 20 MM MES, 5 MM DTT, 95% H2O/5% REMARK 210 D2O; 0.9 MM [U-100% 13C; U-100% REMARK 210 15N] ATU1219, 450 MM SODIUM REMARK 210 CHLORIDE, 20 MM MES, 5 MM DTT, REMARK 210 100% D2O; 0.9 MM [U-100% 15N], 7% REMARK 210 13C BIOSYNTHETICALLY DIRECTED REMARK 210 LABELING ATU1219, 450 MM SODIUM REMARK 210 CHLORIDE, 20 MM MES, 5 MM DTT, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D C(CO)NH; 3D HCCH- REMARK 210 TOCSY; 3D HNCO; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 4D 1H-13C-13C- REMARK 210 1H HMQC-NOESY-HMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH, AUTOSTRUCTURE, REMARK 210 SPARKY, NMRPIPE, FELIX REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY, FEWEST RESTRAINT REMARK 210 VIOLATIONS, REASONABLE GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 15 -55.93 111.61 REMARK 500 1 PRO A 26 101.94 -54.22 REMARK 500 1 HIS A 41 -76.76 -76.56 REMARK 500 1 PRO A 44 -71.56 -49.90 REMARK 500 1 ARG A 46 -78.96 -62.20 REMARK 500 1 ASP A 48 -139.98 -166.93 REMARK 500 1 ALA A 92 72.03 55.76 REMARK 500 2 PRO A 44 37.81 -82.75 REMARK 500 2 ARG A 46 -122.50 -112.21 REMARK 500 2 ASP A 48 -91.12 58.73 REMARK 500 3 LYS A 15 -59.85 -178.55 REMARK 500 3 HIS A 41 -84.60 -98.92 REMARK 500 3 ASP A 48 -90.45 55.89 REMARK 500 3 CYS A 84 34.89 -85.69 REMARK 500 3 GLU A 91 -155.99 -130.32 REMARK 500 3 ALA A 92 93.23 70.72 REMARK 500 4 ASP A 48 -102.20 71.58 REMARK 500 4 HIS A 83 -55.36 -173.52 REMARK 500 4 ALA A 92 -51.79 -128.05 REMARK 500 5 GLN A 4 98.54 66.62 REMARK 500 5 LEU A 7 -157.39 -98.48 REMARK 500 5 GLU A 42 80.82 -150.82 REMARK 500 5 PRO A 44 22.99 -69.07 REMARK 500 5 ASP A 48 -49.81 175.12 REMARK 500 5 CYS A 84 74.86 -119.25 REMARK 500 5 PRO A 93 -75.83 -95.10 REMARK 500 5 ASN A 94 -49.45 -162.12 REMARK 500 6 ASP A 48 -76.44 69.39 REMARK 500 6 MET A 63 -49.85 -130.22 REMARK 500 6 ASP A 65 85.98 73.41 REMARK 500 7 ALA A 25 107.24 -165.59 REMARK 500 7 HIS A 41 -70.15 -68.94 REMARK 500 7 GLU A 42 80.44 -162.15 REMARK 500 7 ASP A 48 -166.15 -103.64 REMARK 500 7 ALA A 92 89.53 61.53 REMARK 500 8 TRP A 13 -172.97 63.83 REMARK 500 8 HIS A 41 -78.40 -94.44 REMARK 500 8 PRO A 44 30.01 -94.66 REMARK 500 8 ARG A 46 -138.88 -92.40 REMARK 500 8 ASP A 48 -88.70 60.82 REMARK 500 9 GLU A 42 79.00 -160.19 REMARK 500 9 PRO A 44 33.79 -88.04 REMARK 500 9 ASP A 48 -74.46 72.29 REMARK 500 9 LYS A 89 101.10 67.87 REMARK 500 10 ASN A 9 45.34 -93.66 REMARK 500 10 ASP A 10 92.02 -67.52 REMARK 500 10 HIS A 41 -61.65 -109.22 REMARK 500 10 ASP A 48 -81.38 63.63 REMARK 500 10 ALA A 92 70.52 50.84 REMARK 500 11 PRO A 16 154.87 -47.64 REMARK 500 REMARK 500 THIS ENTRY HAS 98 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ATT14 RELATED DB: TARGETDB REMARK 900 RELATED ID: 16564 RELATED DB: BMRB DBREF 2KPQ A 1 98 UNP A9CJC8 A9CJC8_AGRT5 1 98 SEQADV 2KPQ GLY A 99 UNP A9CJC8 EXPRESSION TAG SEQADV 2KPQ SER A 100 UNP A9CJC8 EXPRESSION TAG SEQRES 1 A 100 MET GLU VAL GLN SER MET LEU LEU ASN ASP VAL LYS TRP SEQRES 2 A 100 GLU LYS PRO VAL THR ILE SER LEU GLN ASN GLY ALA PRO SEQRES 3 A 100 ARG ILE PHE ASN GLY VAL TYR GLU ALA PHE ASP PHE LEU SEQRES 4 A 100 GLN HIS GLU TRP PRO ALA ARG GLY ASP ARG ALA HIS GLU SEQRES 5 A 100 GLN ALA LEU ARG LEU CYS ARG ALA SER LEU MET GLY ASP SEQRES 6 A 100 VAL ALA GLY GLU ILE ALA ARG THR ALA PHE VAL ALA ALA SEQRES 7 A 100 SER ARG GLN ALA HIS CYS LEU MET GLU ASP LYS ALA GLU SEQRES 8 A 100 ALA PRO ASN THR ILE ALA SER GLY SER HELIX 1 1 VAL A 32 GLU A 42 1 11 HELIX 2 2 ASP A 48 MET A 63 1 16 HELIX 3 3 ALA A 67 HIS A 83 1 17 SHEET 1 A 2 LYS A 12 SER A 20 0 SHEET 2 A 2 PRO A 26 GLY A 31 -1 O ARG A 27 N ILE A 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1