data_2KPS # _entry.id 2KPS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KPS RCSB RCSB101421 WWPDB D_1000101421 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2010-10-06 _pdbx_database_PDB_obs_spr.pdb_id 2L3U _pdbx_database_PDB_obs_spr.replace_pdb_id 2KPS _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB DhR29A . unspecified PDB 2KPU . unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KPS _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-19 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_mr OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barb, A.W.' 1 'Lee, H.' 2 'Belote, R.L.' 3 'Ciccosanti, C.' 4 'Hamilton, K.' 5 'Acton, T.B.' 6 'Xiao, R.' 7 'Everett, J.K.' 8 'Montelione, G.T.' 9 'Prestegard, J.H.' 10 'Northeast Structural Genomics Consortium (NESG)' 11 # _citation.id primary _citation.title 'Solution Structure of Domain IV from the YbbR family protein of Desulfitobacterium hafniense' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Barb, A.W.' 1 primary 'Lee, H.' 2 primary 'Belote, R.' 3 primary 'Ciccosanti, C.' 4 primary 'Hamilton, K.' 5 primary 'Acton, T.' 6 primary 'Xiao, R.' 7 primary 'Everett, J.' 8 primary 'Montelione, G.T.' 9 primary 'Prestegard, J.' 10 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Uncharacterized protein' _entity.formula_weight 11269.006 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 321-409' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKTLYDLPIVLRNLPEDLVLEKPLPEVSVTIRAYPEILNNLTKEQISLWIDATGKAVGEHTVKIYWQLPAGIEMVSIPDV TYTLKAKEDPLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MKTLYDLPIVLRNLPEDLVLEKPLPEVSVTIRAYPEILNNLTKEQISLWIDATGKAVGEHTVKIYWQLPAGIEMVSIPDV TYTLKAKEDPLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier DhR29A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 THR n 1 4 LEU n 1 5 TYR n 1 6 ASP n 1 7 LEU n 1 8 PRO n 1 9 ILE n 1 10 VAL n 1 11 LEU n 1 12 ARG n 1 13 ASN n 1 14 LEU n 1 15 PRO n 1 16 GLU n 1 17 ASP n 1 18 LEU n 1 19 VAL n 1 20 LEU n 1 21 GLU n 1 22 LYS n 1 23 PRO n 1 24 LEU n 1 25 PRO n 1 26 GLU n 1 27 VAL n 1 28 SER n 1 29 VAL n 1 30 THR n 1 31 ILE n 1 32 ARG n 1 33 ALA n 1 34 TYR n 1 35 PRO n 1 36 GLU n 1 37 ILE n 1 38 LEU n 1 39 ASN n 1 40 ASN n 1 41 LEU n 1 42 THR n 1 43 LYS n 1 44 GLU n 1 45 GLN n 1 46 ILE n 1 47 SER n 1 48 LEU n 1 49 TRP n 1 50 ILE n 1 51 ASP n 1 52 ALA n 1 53 THR n 1 54 GLY n 1 55 LYS n 1 56 ALA n 1 57 VAL n 1 58 GLY n 1 59 GLU n 1 60 HIS n 1 61 THR n 1 62 VAL n 1 63 LYS n 1 64 ILE n 1 65 TYR n 1 66 TRP n 1 67 GLN n 1 68 LEU n 1 69 PRO n 1 70 ALA n 1 71 GLY n 1 72 ILE n 1 73 GLU n 1 74 MET n 1 75 VAL n 1 76 SER n 1 77 ILE n 1 78 PRO n 1 79 ASP n 1 80 VAL n 1 81 THR n 1 82 TYR n 1 83 THR n 1 84 LEU n 1 85 LYS n 1 86 ALA n 1 87 LYS n 1 88 GLU n 1 89 ASP n 1 90 PRO n 1 91 LEU n 1 92 GLU n 1 93 HIS n 1 94 HIS n 1 95 HIS n 1 96 HIS n 1 97 HIS n 1 98 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DSY4488 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Y51 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfitobacterium hafniense Y51' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 138119 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'pET 21' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q24NW5_DESHY _struct_ref.pdbx_db_accession Q24NW5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KTLYDLPIVLRNLPEDLVLEKPLPEVSVTIRAYPEILNNLTKEQISLWIDATGKAVGEHTVKIYWQLPAGIEMVSIPDVT YTLKAKEDP ; _struct_ref.pdbx_align_begin 321 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KPS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 90 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q24NW5 _struct_ref_seq.db_align_beg 321 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 409 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KPS MET A 1 ? UNP Q24NW5 ? ? 'INITIATING METHIONINE' 1 1 1 2KPS LEU A 91 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 91 2 1 2KPS GLU A 92 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 92 3 1 2KPS HIS A 93 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 93 4 1 2KPS HIS A 94 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 94 5 1 2KPS HIS A 95 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 95 6 1 2KPS HIS A 96 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 96 7 1 2KPS HIS A 97 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 97 8 1 2KPS HIS A 98 ? UNP Q24NW5 ? ? 'EXPRESSION TAG' 98 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D HNCACB' 1 3 1 '3D HN(CO)CA' 1 4 1 '3D H(CCO)NH' 1 5 1 '3D HCCH-TOCSY' 1 6 1 '3D 1H-15N NOESY' 1 7 1 '3D 1H-13C NOESY' 1 8 1 '3D HNCO' 1 9 2 '2D 1H-15N HSQC' 1 10 2 '3D HNCO' 1 11 3 '2D 1H-15N HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 13C; U-100% 15N] DhR29a, 200 mM sodium chloride, 10 % D2O, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-13C] DhR29a, 10 % D2O, 200 mM sodium chloride, 1 mg Pf1 phage, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '1 mM DhR29a, 200 mM sodium chloride, 10 % D2O, 7 % acrylamide, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2KPS _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'refinement completed using XPLOR-NIH and 3 RDC datasets, NOE list, and dihedral angle constraints' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'back calculated data agree with experimental NOESY spectrum' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KPS _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KPS _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMRJ ? 1 'Johnson, One Moon Scientific' 'chemical shift assignment' NMRView ? 2 'Johnson, One Moon Scientific' 'data analysis' NMRView ? 3 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 4 'Schwieters, Kuszewski, Tjandra and Clore' refinement X-PLOR_NIH ? 5 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KPS _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KPS _struct.title 'Solution Structure of Domain IV from the YbbR family protein of Desulfitobacterium hafniense' _struct.pdbx_descriptor 'Uncharacterized protein' _struct.pdbx_model_details 'fewest violations, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KPS _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;beta strand, figure eight, figure 8, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? LEU A 7 ? THR A 3 LEU A 7 5 ? 5 HELX_P HELX_P2 2 TYR A 34 ? ASN A 40 ? TYR A 34 ASN A 40 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 10 ? LEU A 11 ? VAL A 10 LEU A 11 A 2 TRP A 49 ? ILE A 50 ? TRP A 49 ILE A 50 B 1 LEU A 18 ? LEU A 20 ? LEU A 18 LEU A 20 B 2 LEU A 84 ? ALA A 86 ? LEU A 84 ALA A 86 C 1 HIS A 60 ? LYS A 63 ? HIS A 60 LYS A 63 C 2 ASP A 79 ? TYR A 82 ? ASP A 79 TYR A 82 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 10 ? N VAL A 10 O ILE A 50 ? O ILE A 50 B 1 2 N VAL A 19 ? N VAL A 19 O LYS A 85 ? O LYS A 85 C 1 2 N VAL A 62 ? N VAL A 62 O VAL A 80 ? O VAL A 80 # _atom_sites.entry_id 2KPS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 TRP 66 66 66 TRP TRP A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 HIS 98 98 98 HIS HIS A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-17 2 'Structure model' 1 1 2010-10-06 3 'Structure model' 1 2 2011-07-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 3 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id DhR29a-1 1 ? mM '[U-100% 13C; U-100% 15N]' 1 'sodium chloride-2' 200 ? mM ? 1 D2O-3 10 ? % ? 1 DhR29a-4 1 ? mM '[U-13C]' 2 D2O-5 10 ? % ? 2 'sodium chloride-6' 200 ? mM ? 2 'Pf1 phage-7' 1 ? mg/mL ? 2 DhR29a-8 1 ? mM ? 3 'sodium chloride-9' 200 ? mM ? 3 D2O-10 10 ? % ? 3 acrylamide-11 7 ? % ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A PRO 25 ? ? H A VAL 27 ? ? 1.23 2 2 O A PRO 25 ? ? N A VAL 27 ? ? 2.18 3 3 O A PRO 25 ? ? H A VAL 27 ? ? 1.30 4 4 O A PRO 25 ? ? H A VAL 27 ? ? 1.27 5 4 O A THR 42 ? ? H A GLN 45 ? ? 1.58 6 4 O A PRO 25 ? ? N A VAL 27 ? ? 2.18 7 5 O A THR 42 ? ? H A GLN 45 ? ? 1.59 8 5 O A ARG 12 ? ? H A LEU 14 ? ? 1.60 9 6 O A THR 42 ? ? H A GLN 45 ? ? 1.56 10 7 O A LEU 24 ? ? H A GLU 26 ? ? 1.09 11 7 O A THR 42 ? ? H A GLN 45 ? ? 1.53 12 7 O A LEU 24 ? ? N A GLU 26 ? ? 1.92 13 8 O A THR 42 ? ? H A GLN 45 ? ? 1.54 14 9 O A LEU 24 ? ? H A GLU 26 ? ? 1.45 15 9 O A THR 42 ? ? H A GLN 45 ? ? 1.45 16 10 O A PRO 25 ? ? H A VAL 27 ? ? 1.26 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 7 _pdbx_validate_rmsd_bond.auth_atom_id_1 N _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 25 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CA _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PRO _pdbx_validate_rmsd_bond.auth_seq_id_2 25 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.574 _pdbx_validate_rmsd_bond.bond_target_value 1.468 _pdbx_validate_rmsd_bond.bond_deviation 0.106 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 2 ? ? -170.91 -22.52 2 1 TYR A 5 ? ? -82.45 35.20 3 1 ASN A 13 ? ? 55.90 -19.86 4 1 LEU A 14 ? ? -38.53 121.76 5 1 PRO A 15 ? ? -47.48 150.42 6 1 GLU A 21 ? ? -65.43 26.67 7 1 LYS A 22 ? ? 110.96 158.25 8 1 PRO A 23 ? ? -63.47 9.82 9 1 LEU A 24 ? ? 29.42 83.40 10 1 GLU A 26 ? ? -12.58 104.19 11 1 PRO A 35 ? ? -45.26 -18.82 12 1 ALA A 52 ? ? -95.48 44.65 13 1 TYR A 65 ? ? -99.79 48.95 14 1 GLU A 88 ? ? -83.66 48.33 15 1 PRO A 90 ? ? -62.15 9.03 16 1 LEU A 91 ? ? 57.23 18.67 17 1 HIS A 93 ? ? -156.42 -61.88 18 1 HIS A 95 ? ? 51.26 88.01 19 1 HIS A 96 ? ? -167.31 -29.38 20 2 THR A 3 ? ? 50.25 -170.88 21 2 TYR A 5 ? ? -167.62 7.65 22 2 ARG A 12 ? ? -165.74 -41.42 23 2 ASN A 13 ? ? -53.88 13.06 24 2 GLU A 21 ? ? -69.68 35.43 25 2 LYS A 22 ? ? 98.28 148.89 26 2 PRO A 23 ? ? -59.94 9.81 27 2 LEU A 24 ? ? 30.37 65.07 28 2 GLU A 26 ? ? -51.68 42.83 29 2 GLU A 88 ? ? -82.13 -94.82 30 2 LEU A 91 ? ? -102.91 -66.24 31 2 GLU A 92 ? ? -168.22 -57.09 32 2 HIS A 94 ? ? -167.14 -119.09 33 2 HIS A 96 ? ? 52.03 87.10 34 3 LYS A 2 ? ? -166.69 -60.64 35 3 LEU A 7 ? ? -161.06 74.25 36 3 ASN A 13 ? ? -59.87 24.89 37 3 LYS A 22 ? ? 167.80 -43.57 38 3 LEU A 24 ? ? 158.23 -44.16 39 3 GLU A 26 ? ? -56.04 47.27 40 3 ILE A 64 ? ? -88.03 -132.35 41 3 TYR A 65 ? ? -161.80 -165.49 42 3 GLN A 67 ? ? -160.78 91.56 43 3 GLU A 88 ? ? -166.48 -23.45 44 3 LEU A 91 ? ? -164.68 -27.18 45 3 GLU A 92 ? ? -169.43 -44.41 46 3 HIS A 93 ? ? -66.59 -144.52 47 3 HIS A 94 ? ? -152.02 28.42 48 3 HIS A 95 ? ? -61.44 90.75 49 4 THR A 3 ? ? 50.49 92.45 50 4 LEU A 4 ? ? -159.90 32.73 51 4 LEU A 7 ? ? -118.50 76.20 52 4 ARG A 12 ? ? -162.38 -40.05 53 4 ASN A 13 ? ? -56.26 16.93 54 4 GLU A 21 ? ? -68.82 38.92 55 4 LYS A 22 ? ? 92.53 148.30 56 4 LEU A 24 ? ? 75.99 68.69 57 4 PRO A 25 ? ? -69.07 1.98 58 4 GLU A 26 ? ? -53.10 49.76 59 4 ALA A 52 ? ? -96.55 39.14 60 4 TRP A 66 ? ? 57.92 125.36 61 4 PRO A 69 ? ? -56.87 -3.39 62 4 GLU A 92 ? ? -166.60 -87.35 63 4 HIS A 93 ? ? -155.88 -60.32 64 4 HIS A 97 ? ? 53.98 97.00 65 5 LEU A 4 ? ? -60.09 -91.50 66 5 PRO A 8 ? ? -58.71 104.10 67 5 ASN A 13 ? ? -55.92 21.10 68 5 LYS A 22 ? ? 163.25 121.46 69 5 LEU A 24 ? ? 80.24 73.70 70 5 PRO A 25 ? ? -58.38 -94.20 71 5 GLU A 26 ? ? 35.47 59.45 72 5 THR A 30 ? ? -84.57 48.09 73 5 TYR A 65 ? ? -86.12 45.79 74 5 GLU A 88 ? ? -168.08 71.75 75 5 GLU A 92 ? ? 51.40 -92.73 76 5 HIS A 93 ? ? 55.11 -153.02 77 5 HIS A 94 ? ? -169.23 -43.03 78 6 TYR A 5 ? ? -78.48 42.62 79 6 LEU A 7 ? ? 46.42 75.95 80 6 ASN A 13 ? ? -52.25 13.37 81 6 PRO A 15 ? ? -43.97 152.38 82 6 GLU A 21 ? ? -70.83 38.04 83 6 LYS A 22 ? ? 99.73 136.75 84 6 PRO A 23 ? ? -48.47 6.78 85 6 LEU A 24 ? ? -2.23 81.91 86 6 PRO A 25 ? ? -75.24 -79.40 87 6 GLU A 26 ? ? 33.32 47.43 88 6 ASN A 40 ? ? -106.28 40.00 89 6 ALA A 52 ? ? -97.55 42.73 90 6 ILE A 64 ? ? -71.61 -136.14 91 6 TYR A 65 ? ? -169.09 -19.22 92 6 TRP A 66 ? ? 59.91 127.60 93 6 GLN A 67 ? ? -160.81 91.47 94 6 GLU A 88 ? ? -159.72 -39.36 95 6 HIS A 94 ? ? -144.07 58.04 96 6 HIS A 95 ? ? 52.29 90.21 97 6 HIS A 97 ? ? 51.75 -104.60 98 7 ARG A 12 ? ? -160.19 -37.76 99 7 ASN A 13 ? ? -58.15 20.62 100 7 PRO A 25 ? ? -32.78 42.40 101 7 ILE A 46 ? ? -37.44 124.98 102 7 TRP A 66 ? ? 54.96 110.48 103 7 GLU A 88 ? ? -156.90 20.09 104 7 GLU A 92 ? ? -57.29 96.28 105 7 HIS A 93 ? ? 52.69 -151.07 106 7 HIS A 97 ? ? -167.07 106.70 107 8 THR A 3 ? ? 50.18 87.28 108 8 TYR A 5 ? ? -74.56 39.59 109 8 LYS A 22 ? ? 175.41 166.15 110 8 PRO A 23 ? ? -52.99 86.62 111 8 LEU A 24 ? ? -109.34 56.84 112 8 PRO A 25 ? ? -81.95 -75.97 113 8 GLU A 26 ? ? 34.03 56.76 114 8 ALA A 52 ? ? -96.82 41.26 115 8 TRP A 66 ? ? 53.75 131.09 116 8 MET A 74 ? ? -69.24 98.46 117 8 LYS A 87 ? ? -73.27 -137.42 118 8 GLU A 88 ? ? 53.26 80.01 119 8 GLU A 92 ? ? 54.54 101.17 120 8 HIS A 93 ? ? 60.45 -154.00 121 8 HIS A 95 ? ? 57.43 107.07 122 9 LEU A 4 ? ? -65.88 -159.16 123 9 ARG A 12 ? ? -166.80 -43.11 124 9 ASN A 13 ? ? -53.44 14.72 125 9 PRO A 15 ? ? -46.00 151.72 126 9 LYS A 22 ? ? 177.79 161.79 127 9 PRO A 23 ? ? -59.45 -5.09 128 9 LEU A 24 ? ? 33.59 76.45 129 9 PRO A 25 ? ? -56.31 60.81 130 9 ALA A 52 ? ? -82.84 38.14 131 9 ILE A 64 ? ? 61.34 124.30 132 9 GLU A 88 ? ? -160.84 -8.70 133 9 LEU A 91 ? ? -172.55 -30.62 134 9 HIS A 93 ? ? 57.06 163.82 135 9 HIS A 95 ? ? -168.05 106.79 136 9 HIS A 96 ? ? -168.21 95.07 137 10 LYS A 2 ? ? -170.61 62.71 138 10 TYR A 5 ? ? -162.59 -1.21 139 10 LEU A 7 ? ? -40.82 104.40 140 10 ASN A 13 ? ? -53.41 14.80 141 10 GLU A 21 ? ? -67.07 37.70 142 10 LYS A 22 ? ? 96.64 122.96 143 10 LEU A 24 ? ? 72.48 72.44 144 10 PRO A 25 ? ? -60.35 0.97 145 10 GLU A 26 ? ? -55.26 47.32 146 10 ALA A 33 ? ? -165.84 -161.97 147 10 ALA A 52 ? ? -97.50 41.98 148 10 GLU A 88 ? ? -168.50 82.37 149 10 GLU A 92 ? ? -68.88 80.85 150 10 HIS A 95 ? ? 54.83 97.90 151 10 HIS A 97 ? ? 51.42 83.98 #