HEADER IMMUNE SYSTEM 27-OCT-09 2KQ4 TITLE ATOMIC RESOLUTION PROTEIN STRUCTURE DETERMINATION BY THREE-DIMENSIONAL TITLE 2 TRANSFERRED ECHO DOUBLE RESONANCE SOLID-STATE NUCLEAR MAGNETIC TITLE 3 RESONANCE SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN G; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: UNP RESIDUES 303 TO 357; COMPND 5 SYNONYM: IGG-BINDING PROTEIN G; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS SP. 'GROUP G'; SOURCE 3 ORGANISM_TAXID: 1320; SOURCE 4 GENE: SPG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS GB1, TEDOR, SOLID-STATE, CELL WALL, IGG-BINDING PROTEIN, KEYWDS 2 PEPTIDOGLYCAN-ANCHOR, SECRETED, THERMOSTABLE, IMMUNE SYSTEM EXPDTA SOLID-STATE NMR NUMMDL 10 AUTHOR A.J.NIEUWKOOP,B.J.WYLIE,W.FRANKS,G.J.SHAH,C.M.RIENSTRA REVDAT 2 13-OCT-21 2KQ4 1 REMARK SEQADV REVDAT 1 17-NOV-09 2KQ4 0 JRNL AUTH A.J.NIEUWKOOP,B.J.WYLIE,W.T.FRANKS,G.J.SHAH,C.M.RIENSTRA JRNL TITL ATOMIC RESOLUTION PROTEIN STRUCTURE DETERMINATION BY JRNL TITL 2 THREE-DIMENSIONAL TRANSFERRED ECHO DOUBLE RESONANCE JRNL TITL 3 SOLID-STATE NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY JRNL REF J.CHEM.PHYS. V. 131 95101 2009 JRNL REFN ISSN 0021-9606 JRNL PMID 19739873 JRNL DOI 10.1063/1.3211103 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.21 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DG SUB-EMBED WAS USED FROM INITIAL REMARK 3 EXTEND GEOMETRY, TWO STEPS OF SIMULATED ANNEALING REMARK 4 REMARK 4 2KQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000101433. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 30 MG 1,3-13C GLYCEROL, U 15N REMARK 210 ENTITY-1, 50 V/V MPTG-2, SOLID; REMARK 210 30 MG 2-13C GLYCEROL, U 15N REMARK 210 ENTITY-3, 50 V/V MPTG-4, SOLID REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D TEDOR REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INFINITY PLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, NMRPIPE REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING, SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 250 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 4 REMARK 210 REMARK 210 REMARK: NULL REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU X 12 HZ3 LYS X 13 1.57 REMARK 500 H LEU X 5 O THR X 16 1.57 REMARK 500 O GLU X 27 H LYS X 31 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR X 45 133.61 -171.08 REMARK 500 2 TYR X 45 135.14 -173.38 REMARK 500 3 TYR X 45 134.53 -175.03 REMARK 500 4 TYR X 45 135.27 -174.43 REMARK 500 5 LYS X 50 55.69 39.64 REMARK 500 6 TYR X 45 135.55 -173.90 REMARK 500 7 TYR X 45 134.45 -172.88 REMARK 500 8 TYR X 45 133.78 -172.46 REMARK 500 9 TYR X 45 134.23 -170.56 REMARK 500 10 TYR X 45 135.44 -171.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15156 RELATED DB: BMRB REMARK 900 RELATED ID: 15380 RELATED DB: BMRB DBREF 2KQ4 X 2 56 UNP P19909 SPG2_STRSG 303 357 SEQADV 2KQ4 MET X 1 UNP P19909 EXPRESSION TAG SEQADV 2KQ4 GLN X 2 UNP P19909 THR 303 ENGINEERED MUTATION SEQRES 1 X 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 X 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 X 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 X 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 X 56 THR VAL THR GLU HELIX 1 1 ASP X 22 GLY X 38 1 17 SHEET 1 A 4 LYS X 13 GLU X 19 0 SHEET 2 A 4 GLN X 2 ASN X 8 -1 N LEU X 5 O THR X 16 SHEET 3 A 4 THR X 51 THR X 55 1 O PHE X 52 N LYS X 4 SHEET 4 A 4 TYR X 45 ASP X 46 -1 N ASP X 46 O THR X 51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1