HEADER HYDROLASE 04-DEC-09 2KR6 TITLE SOLUTION STRUCTURE OF PRESENILIN-1 CTF SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRESENILIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PRESENILIN-1 CTF SUBUNIT, UNP RESIDUES 292-467; COMPND 5 SYNONYM: PS-1, PROTEIN S182; COMPND 6 EC: 3.4.23.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AD3, PS1, PSEN1, PSNL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET21A KEYWDS PROTEASE, ALTERNATIVE SPLICING, ALZHEIMER DISEASE, AMYLOIDOSIS, KEYWDS 2 APOPTOSIS, CELL ADHESION, DISEASE MUTATION, ENDOPLASMIC RETICULUM, KEYWDS 3 GOLGI APPARATUS, HYDROLASE, MEMBRANE, NEURODEGENERATION, NOTCH KEYWDS 4 SIGNALING PATHWAY, PHOSPHOPROTEIN, POLYMORPHISM, TRANSMEMBRANE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR V.DOETSCH REVDAT 2 16-MAR-22 2KR6 1 REMARK REVDAT 1 28-APR-10 2KR6 0 JRNL AUTH V.DOETSCH JRNL TITL SOLUTION STRUCTURE OF PRESENILIN-1 CTF SUBUNIT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KR6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000101471. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT BAR REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 PS1CTF-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 800 MHZ; 950 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 312 76.81 53.29 REMARK 500 1 GLU A 318 119.14 -160.17 REMARK 500 1 SER A 319 102.68 -170.07 REMARK 500 1 GLU A 321 128.12 -178.16 REMARK 500 1 ASP A 326 162.76 63.15 REMARK 500 1 ASP A 333 -61.63 -133.38 REMARK 500 1 GLU A 339 127.03 -177.95 REMARK 500 1 GLU A 341 48.75 -173.08 REMARK 500 1 ALA A 342 -43.37 -178.12 REMARK 500 1 ARG A 344 -43.35 -177.68 REMARK 500 1 SER A 346 -172.19 53.69 REMARK 500 1 LEU A 348 -176.58 57.74 REMARK 500 1 ARG A 352 179.27 60.25 REMARK 500 1 ILE A 368 -71.76 -86.11 REMARK 500 1 GLU A 375 -48.89 -131.00 REMARK 500 1 ARG A 377 164.49 63.27 REMARK 500 1 ALA A 400 -48.78 176.05 REMARK 500 1 SER A 401 108.10 -168.50 REMARK 500 1 ASP A 403 -169.71 64.62 REMARK 500 1 TRP A 404 -73.30 -55.67 REMARK 500 1 ASN A 405 32.83 -147.29 REMARK 500 1 LYS A 429 -43.14 -176.67 REMARK 500 1 LYS A 430 129.34 -179.66 REMARK 500 1 ALA A 434 -73.12 -50.99 REMARK 500 1 PRO A 436 77.69 -69.72 REMARK 500 1 ILE A 437 84.49 50.96 REMARK 500 1 LEU A 443 -74.21 -55.58 REMARK 500 1 LEU A 452 -75.10 -136.97 REMARK 500 1 GLN A 454 90.30 67.88 REMARK 500 1 PRO A 455 -165.27 -69.78 REMARK 500 1 PHE A 462 -171.13 63.56 REMARK 500 1 PHE A 465 -41.96 -155.43 REMARK 500 1 TYR A 466 178.17 61.47 REMARK 500 2 ALA A 305 71.80 58.45 REMARK 500 2 ARG A 308 27.24 -162.81 REMARK 500 2 ALA A 317 73.01 53.44 REMARK 500 2 ASP A 326 -37.03 -178.55 REMARK 500 2 THR A 327 100.25 61.03 REMARK 500 2 GLU A 330 79.71 -101.98 REMARK 500 2 ASN A 331 31.54 -168.97 REMARK 500 2 ASP A 332 62.58 -159.68 REMARK 500 2 GLU A 339 46.65 -99.80 REMARK 500 2 TRP A 340 -170.79 -170.66 REMARK 500 2 GLU A 341 -174.46 62.90 REMARK 500 2 ALA A 342 -54.20 -157.47 REMARK 500 2 SER A 346 -68.07 -108.28 REMARK 500 2 HIS A 347 -37.19 -178.41 REMARK 500 2 LEU A 348 105.16 -59.77 REMARK 500 2 PRO A 350 -170.97 -69.82 REMARK 500 2 ARG A 352 99.05 62.56 REMARK 500 REMARK 500 THIS ENTRY HAS 682 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16625 RELATED DB: BMRB DBREF 2KR6 A 292 467 UNP P49768 PSN1_HUMAN 292 467 SEQRES 1 A 176 MET VAL TRP LEU VAL ASN MET ALA GLU GLY ASP PRO GLU SEQRES 2 A 176 ALA GLN ARG ARG VAL SER LYS ASN SER LYS TYR ASN ALA SEQRES 3 A 176 GLU SER THR GLU ARG GLU SER GLN ASP THR VAL ALA GLU SEQRES 4 A 176 ASN ASP ASP GLY GLY PHE SER GLU GLU TRP GLU ALA GLN SEQRES 5 A 176 ARG ASP SER HIS LEU GLY PRO HIS ARG SER THR PRO GLU SEQRES 6 A 176 SER ARG ALA ALA VAL GLN GLU LEU SER SER SER ILE LEU SEQRES 7 A 176 ALA GLY GLU ASP PRO GLU GLU ARG GLY VAL LYS LEU GLY SEQRES 8 A 176 LEU GLY ASP PHE ILE PHE TYR SER VAL LEU VAL GLY LYS SEQRES 9 A 176 ALA SER ALA THR ALA SER GLY ASP TRP ASN THR THR ILE SEQRES 10 A 176 ALA CYS PHE VAL ALA ILE LEU ILE GLY LEU CYS LEU THR SEQRES 11 A 176 LEU LEU LEU LEU ALA ILE PHE LYS LYS ALA LEU PRO ALA SEQRES 12 A 176 LEU PRO ILE SER ILE THR PHE GLY LEU VAL PHE TYR PHE SEQRES 13 A 176 ALA THR ASP TYR LEU VAL GLN PRO PHE MET ASP GLN LEU SEQRES 14 A 176 ALA PHE HIS GLN PHE TYR ILE HELIX 1 1 MET A 292 GLU A 300 1 9 HELIX 2 2 PRO A 355 LEU A 369 1 15 HELIX 3 3 ASP A 385 ALA A 400 1 16 HELIX 4 4 THR A 406 LYS A 429 1 24 HELIX 5 5 PHE A 441 ASP A 450 1 10 HELIX 6 6 PRO A 455 GLN A 459 5 5 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1