data_2KR8 # _entry.id 2KR8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KR8 RCSB RCSB101473 WWPDB D_1000101473 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2010-06-09 _pdbx_database_PDB_obs_spr.pdb_id 2XEB _pdbx_database_PDB_obs_spr.replace_pdb_id 2KR8 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2OZB PDB ;X-ray structure of the U4 snRNA 5' stem loop bound to 15.5K and hPrp31 ; unspecified 1E7K PDB 'X-ray structure of the spliceosomal 15.5K bound to U4 snRNA fragment' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KR8 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-12-08 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_mr OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Falb, M.' 1 'Amata, I.' 2 'Simon, B.' 3 'Carlomagno, T.' 4 # _citation.id primary _citation.title 'Structure of the K-turn U4 RNA: a combined NMR and SANS study' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 1362-4962 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20466811 _citation.pdbx_database_id_DOI 10.1093/nar/gkq380 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Falb, M.' 1 primary 'Amata, I.' 2 primary 'Gabel, F.' 3 primary 'Simon, B.' 4 primary 'Carlomagno, T.' 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3'" 6118.682 1 ? U19G ;U4 5'-SL strand A, residues 19-37 ; ? 2 polymer syn "5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3'" 4516.764 1 ? U40G,U53C ;U4 5'-SL strand B, residues 40-53 ; ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAUCGUAGCCAAUGAGGUU GAUCGUAGCCAAUGAGGUU A ? 2 polyribonucleotide no no GCCGAGGCGCGAUC GCCGAGGCGCGAUC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 U n 1 4 C n 1 5 G n 1 6 U n 1 7 A n 1 8 G n 1 9 C n 1 10 C n 1 11 A n 1 12 A n 1 13 U n 1 14 G n 1 15 A n 1 16 G n 1 17 G n 1 18 U n 1 19 U n 2 1 G n 2 2 C n 2 3 C n 2 4 G n 2 5 A n 2 6 G n 2 7 G n 2 8 C n 2 9 G n 2 10 C n 2 11 G n 2 12 A n 2 13 U n 2 14 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'Homo sapiens' human 9606 'RNA synthesized with in vitro transcription using T7 RNA Polymerase (obtained with E.coli)' 2 1 sample ? ? 'Homo sapiens' human 9606 'RNA synthesized with in vitro transcription using T7 RNA Polymerase (obtained with E.coli)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 GB V00592 36174 1 UAUCGUAGCCAAUGAGGUU 19 ? 2 GB V00592 36174 2 UCCGAGGCGCGAUU 40 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2KR8 A 1 ? 19 ? 36174 19 ? 37 ? 19 37 2 2 2KR8 B 1 ? 14 ? 36174 40 ? 53 ? 40 53 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KR8 G A 1 ? GB 36174 U 19 ENGINEERED 19 1 2 2KR8 G B 1 ? GB 36174 U 40 ENGINEERED 40 2 2 2KR8 C B 14 ? GB 36174 U 53 ENGINEERED 53 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-13C HSQC' 1 2 2 '2D 1H-13C HSQC' 1 3 3 '2D 1H-13C HSQC' 2 4 3 '2D 1H-13C HSQC' 2 5 1 '2D 1H-15N HSQC' 2 6 2 '2D 1H-15N HSQC' 2 7 3 '2D 1H-15N HSQC' 2 8 3 '2D 1H-1H NOESY' 1 9 1 '3D-13C-edited,13C-filtered NOESY' 1 10 2 '3D-13C-edited,13C-filtered NOESY' 1 11 1 '2D-13C-edited,12C-filtered NOESY' 1 12 2 '2D-13C-edited,12C-filtered NOESY' 1 13 1 3D-COSY-TOCSY 1 14 2 3D-COSY-TOCSY 1 15 1 3D-HCN 1 16 2 3D-HCN 1 17 2 '3D-TROSY relayed HCCH-COSY' 1 18 3 2D-HNN-COSY 2 19 3 2D-HNN-COSY 1 20 1 3D-ECOSY 1 21 2 3D-ECOSY 1 22 1 3D-HCP 1 23 2 3D-HCP 1 24 4 '2D 1H-13C HSQC' 1 25 5 '2D 1H-13C HSQC' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature 1 120 7.6 ambient ? 298 2 120 7.6 ambient ? 278 # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.3mM [U-100% 13C; U-100% 15N] RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-1, 0.45mM RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-2, 20mM HEPES-3, 120mM NaCl-4, 90% H2O/10% D2O, 100% D2O ; 1 '90% H2O/10% D2O, 100% D2O' ;0.3mM [U-100% 13C; U-100% 15N] RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-5, 0.45mM RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-6, 20mM HEPES-7, 120mM NaCl-8, 90% H2O/10% D2O, 100% D2O ; 2 '90% H2O/10% D2O, 100% D2O' ;0.3mM [U-100% 13C; U-100% 15N] RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-9, 0.3mM [U-100% 13C; U-100% 15N] RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-10, 20mM HEPES-11, 120mM NaCl-12, 90% H2O/10% D2O, 100% D2O ; 3 '90% H2O/10% D2O, 100% D2O' ;0.3mM [U-10% 13C; U-100% 15N] RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-13, 0.45mM RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-14, 20mM HEPES-15, 120mM NaCl-16, 10-15mg/mL bacteriophages-17, 100% D2O ; 4 '100% D2O' ;0.3mM [U-100% 13C; U-100% 15N] RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-18, 0.45mM RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-19, 20mM HEPES-20, 120mM NaCl-21, 10-15mg/mL bacteriophages-22, 100% D2O ; 5 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker Avance 1 'Bruker Avance' 800 Bruker Avance 2 'Bruker Avance' 700 Bruker Avance 3 'Bruker Avance' 600 Bruker Avance 4 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KR8 _pdbx_nmr_refine.method 'RDC refinement, water refinement' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KR8 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KR8 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA/CNS 1.2/1.1 1 ;Linge, O'Donoghue and Nilges ; 'rdc refinement' ARIA/CNS 1.2/1.1 2 ;Linge, O'Donoghue and Nilges ; 'water refinement' ARIA/CNS 1.2/1.1 3 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' ARIA/CNS 1.2/1.1 4 'Brunger, Adams, Clore, Gros, Nilges and Read' 'rdc refinement' ARIA/CNS 1.2/1.1 5 'Brunger, Adams, Clore, Gros, Nilges and Read' 'water refinement' ARIA/CNS 1.2/1.1 6 'Ferner J, Suhartono M, Breitung S, Jonker HRA, Hennig M, Wohnert J, Gobel M, Schwalbe H. 2009.' 'structure solution' ARIA/CNS 1.2/1.1 7 'Ferner J, Suhartono M, Breitung S, Jonker HRA, Hennig M, Wohnert J, Gobel M, Schwalbe H. 2009.' 'rdc refinement' ARIA/CNS 1.2/1.1 8 'Ferner J, Suhartono M, Breitung S, Jonker HRA, Hennig M, Wohnert J, Gobel M, Schwalbe H. 2009.' 'water refinement' ARIA/CNS 1.2/1.1 9 'Accelrys Software Inc.' 'chemical shift assignment' Felix ? 10 ;Linge, O'Donoghue and Nilges ; refinement ARIA 1.2 11 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.1 12 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KR8 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KR8 _struct.title ;NMR structure of the protein-unbound spliceosomal U4 snRNA 5' stem loop ; _struct.pdbx_descriptor "5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3'" _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KR8 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'U4 snRNA, RNA structure, U4/U6 di-snRNP, pre-mRNA splicing, kink-turn domain, RNP-binding domain, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 14 N3 ? ? A G 19 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 14 O2 ? ? A G 19 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 14 N4 ? ? A G 19 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B U 13 N3 ? ? A A 20 B U 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B U 13 O4 ? ? A A 20 B U 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 12 N1 ? ? A U 21 B A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A U 3 O4 ? ? ? 1_555 B A 12 N6 ? ? A U 21 B A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 11 N1 ? ? A C 22 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 11 O6 ? ? A C 22 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 11 N2 ? ? A C 22 B G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 10 N3 ? ? A G 23 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 10 O2 ? ? A G 23 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 10 N4 ? ? A G 23 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 B G 9 O6 ? ? A U 24 B G 48 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog15 hydrog ? ? A U 6 O2 ? ? ? 1_555 B G 9 N1 ? ? A U 24 B G 48 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog16 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 26 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 26 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 26 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 7 N1 ? ? A C 27 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 7 O6 ? ? A C 27 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 7 N2 ? ? A C 27 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A C 10 N3 ? ? ? 1_555 B G 6 N1 ? ? A C 28 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A C 10 N4 ? ? ? 1_555 B G 6 O6 ? ? A C 28 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A C 10 O2 ? ? ? 1_555 B G 6 N2 ? ? A C 28 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A G 14 N2 ? ? ? 1_555 B A 5 N7 ? ? A G 32 B A 44 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog26 hydrog ? ? A G 14 N3 ? ? ? 1_555 B A 5 N6 ? ? A G 32 B A 44 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog27 hydrog ? ? A A 15 N6 ? ? ? 1_555 B G 4 N3 ? ? A A 33 B G 43 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog28 hydrog ? ? A A 15 N7 ? ? ? 1_555 B G 4 N2 ? ? A A 33 B G 43 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog29 hydrog ? ? A G 16 N1 ? ? ? 1_555 B C 3 N3 ? ? A G 34 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A G 16 N2 ? ? ? 1_555 B C 3 O2 ? ? A G 34 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? A G 16 O6 ? ? ? 1_555 B C 3 N4 ? ? A G 34 B C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? A G 17 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 35 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? A G 17 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 35 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? A G 17 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 35 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2KR8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 19 19 G G A . n A 1 2 A 2 20 20 A A A . n A 1 3 U 3 21 21 U U A . n A 1 4 C 4 22 22 C C A . n A 1 5 G 5 23 23 G G A . n A 1 6 U 6 24 24 U U A . n A 1 7 A 7 25 25 A A A . n A 1 8 G 8 26 26 G G A . n A 1 9 C 9 27 27 C C A . n A 1 10 C 10 28 28 C C A . n A 1 11 A 11 29 29 A A A . n A 1 12 A 12 30 30 A A A . n A 1 13 U 13 31 31 U U A . n A 1 14 G 14 32 32 G G A . n A 1 15 A 15 33 33 A A A . n A 1 16 G 16 34 34 G G A . n A 1 17 G 17 35 35 G G A . n A 1 18 U 18 36 36 U U A . n A 1 19 U 19 37 37 U U A . n B 2 1 G 1 40 40 G G B . n B 2 2 C 2 41 41 C C B . n B 2 3 C 3 42 42 C C B . n B 2 4 G 4 43 43 G G B . n B 2 5 A 5 44 44 A A B . n B 2 6 G 6 45 45 G G B . n B 2 7 G 7 46 46 G G B . n B 2 8 C 8 47 47 C C B . n B 2 9 G 9 48 48 G G B . n B 2 10 C 10 49 49 C C B . n B 2 11 G 11 50 50 G G B . n B 2 12 A 12 51 51 A A B . n B 2 13 U 13 52 52 U U B . n B 2 14 C 14 53 53 C C B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1568.8 ? 1 MORE -4.0 ? 1 'SSA (A^2)' 6782.3 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-05 2 'Structure model' 1 1 2010-06-09 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-1 ; 0.3 ? mM '[U-100% 13C; U-100% 15N]' 1 ;RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-2 ; 0.45 ? mM ? 1 HEPES-3 20 ? mM ? 1 NaCl-4 120 ? mM ? 1 ;RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-5 ; 0.3 ? mM '[U-100% 13C; U-100% 15N]' 2 ;RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-6 ; 0.45 ? mM ? 2 HEPES-7 20 ? mM ? 2 NaCl-8 120 ? mM ? 2 ;RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-9 ; 0.3 ? mM '[U-100% 13C; U-100% 15N]' 3 ;RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-10 ; 0.3 ? mM '[U-100% 13C; U-100% 15N]' 3 HEPES-11 20 ? mM ? 3 NaCl-12 120 ? mM ? 3 ;RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-13 ; 0.3 ? mM '[U-10% 13C; U-100% 15N]' 4 ;RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-14 ; 0.45 ? mM ? 4 HEPES-15 20 ? mM ? 4 NaCl-16 120 ? mM ? 4 bacteriophages-17 ? 10-15 mg/mL ? 4 ;RNA (5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3')-18 ; 0.3 ? mM '[U-100% 13C; U-100% 15N]' 5 ;RNA (5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP*GP*GP*UP*U)-3')-19 ; 0.45 ? mM ? 5 HEPES-20 20 ? mM ? 5 NaCl-21 120 ? mM ? 5 bacteriophages-22 ? 10-15 mg/mL ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H62 A A 33 ? ? H21 B G 43 ? ? 1.30 2 2 H62 A A 33 ? ? H21 B G 43 ? ? 1.28 3 5 H62 A A 33 ? ? H21 B G 43 ? ? 1.31 4 7 H62 A A 33 ? ? H21 B G 43 ? ? 1.30 5 9 H62 A A 33 ? ? H21 B G 43 ? ? 1.27 6 10 H62 A A 33 ? ? H21 B G 43 ? ? 1.26 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C2'" A A 20 ? ? "C1'" A A 20 ? ? 1.477 1.526 -0.049 0.008 N 2 2 "C2'" A G 35 ? ? "C1'" A G 35 ? ? 1.469 1.526 -0.057 0.008 N 3 3 "C2'" A G 19 ? ? "C1'" A G 19 ? ? 1.477 1.526 -0.049 0.008 N 4 4 "C2'" A G 35 ? ? "C1'" A G 35 ? ? 1.469 1.526 -0.057 0.008 N 5 7 "C2'" A A 20 ? ? "C1'" A A 20 ? ? 1.477 1.526 -0.049 0.008 N 6 7 "C2'" A G 35 ? ? "C1'" A G 35 ? ? 1.469 1.526 -0.057 0.008 N 7 8 "C2'" A A 20 ? ? "C1'" A A 20 ? ? 1.476 1.526 -0.050 0.008 N 8 9 "C2'" A G 35 ? ? "C1'" A G 35 ? ? 1.471 1.526 -0.055 0.008 N 9 10 "C2'" A G 35 ? ? "C1'" A G 35 ? ? 1.469 1.526 -0.057 0.008 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 G A 35 ? ? 0.048 'SIDE CHAIN' 2 4 G A 35 ? ? 0.047 'SIDE CHAIN' 3 7 G A 35 ? ? 0.050 'SIDE CHAIN' 4 9 G A 35 ? ? 0.050 'SIDE CHAIN' 5 10 G A 35 ? ? 0.051 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2KR8 'double helix' 2KR8 'a-form double helix' 2KR8 'bulge loop' 2KR8 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 14 1_555 -0.039 -0.106 -0.444 3.488 8.877 -2.665 1 A_G19:C53_B A 19 ? B 53 ? 19 1 1 A A 2 1_555 B U 13 1_555 0.409 -0.187 -0.493 -2.485 -3.649 9.599 2 A_A20:U52_B A 20 ? B 52 ? 20 1 1 A U 3 1_555 B A 12 1_555 0.472 -0.163 -0.114 3.743 -4.941 3.219 3 A_U21:A51_B A 21 ? B 51 ? 20 1 1 A C 4 1_555 B G 11 1_555 0.062 -0.070 -0.340 3.713 -2.649 -2.212 4 A_C22:G50_B A 22 ? B 50 ? 19 1 1 A G 5 1_555 B C 10 1_555 -0.079 -0.091 0.468 0.200 -2.101 -2.718 5 A_G23:C49_B A 23 ? B 49 ? 19 1 1 A U 6 1_555 B G 9 1_555 2.088 -0.488 0.133 -0.339 -3.414 -5.535 6 A_U24:G48_B A 24 ? B 48 ? 28 1 1 A G 8 1_555 B C 8 1_555 -0.094 -0.043 0.390 11.534 -2.804 -1.188 7 A_G26:C47_B A 26 ? B 47 ? 19 1 1 A C 9 1_555 B G 7 1_555 0.092 -0.044 -0.162 -3.692 7.804 -2.699 8 A_C27:G46_B A 27 ? B 46 ? 19 1 1 A C 10 1_555 B G 6 1_555 0.087 -0.144 -0.273 -1.254 7.180 -3.634 9 A_C28:G45_B A 28 ? B 45 ? 19 1 1 A G 14 1_555 B A 5 1_555 6.431 -5.319 -0.473 -5.996 0.502 -5.745 10 A_G32:A44_B A 32 ? B 44 ? 11 10 1 A A 15 1_555 B G 4 1_555 -6.691 -3.345 0.356 -1.191 6.493 -18.550 11 A_A33:G43_B A 33 ? B 43 ? 11 10 1 A G 16 1_555 B C 3 1_555 -0.146 -0.058 -0.198 -6.352 1.779 -0.888 12 A_G34:C42_B A 34 ? B 42 ? 19 1 1 A G 17 1_555 B C 2 1_555 -0.064 -0.061 -0.387 -0.188 9.289 -1.732 13 A_G35:C41_B A 35 ? B 41 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 14 1_555 A A 2 1_555 B U 13 1_555 0.228 -1.758 3.654 -5.909 6.456 34.048 -3.941 -1.319 3.194 10.806 9.891 35.123 1 AA_G19A20:U52C53_BB A 19 ? B 53 ? A 20 ? B 52 ? 1 A A 2 1_555 B U 13 1_555 A U 3 1_555 B A 12 1_555 0.219 -1.434 3.199 -2.081 -0.704 28.586 -2.740 -0.904 3.209 -1.423 4.206 28.668 2 AA_A20U21:A51U52_BB A 20 ? B 52 ? A 21 ? B 51 ? 1 A U 3 1_555 B A 12 1_555 A C 4 1_555 B G 11 1_555 -0.361 -1.421 3.090 2.234 7.026 40.553 -2.709 0.732 2.794 10.036 -3.191 41.190 3 AA_U21C22:G50A51_BB A 21 ? B 51 ? A 22 ? B 50 ? 1 A C 4 1_555 B G 11 1_555 A G 5 1_555 B C 10 1_555 -0.831 -1.196 3.898 -4.817 2.119 27.761 -3.041 0.359 3.883 4.367 9.927 28.246 4 AA_C22G23:C49G50_BB A 22 ? B 50 ? A 23 ? B 49 ? 1 A G 5 1_555 B C 10 1_555 A U 6 1_555 B G 9 1_555 -0.362 -0.488 3.579 5.016 18.149 42.857 -2.240 0.905 3.086 23.529 -6.503 46.632 5 AA_G23U24:G48C49_BB A 23 ? B 49 ? A 24 ? B 48 ? 1 A U 6 1_555 B G 9 1_555 A G 8 1_555 B C 8 1_555 1.175 -0.835 6.305 29.076 -3.632 17.952 -0.167 8.018 4.416 -7.334 -58.716 34.261 6 AA_U24G26:C47G48_BB A 24 ? B 48 ? A 26 ? B 47 ? 1 A G 8 1_555 B C 8 1_555 A C 9 1_555 B G 7 1_555 -0.075 -0.539 4.286 0.163 31.627 34.455 -4.102 0.113 2.863 43.721 -0.226 46.443 7 AA_G26C27:G46C47_BB A 26 ? B 47 ? A 27 ? B 46 ? 1 A C 9 1_555 B G 7 1_555 A C 10 1_555 B G 6 1_555 -0.634 0.166 3.488 2.373 33.732 25.929 -3.608 1.147 2.260 53.438 -3.760 42.380 8 AA_C27C28:G45G46_BB A 27 ? B 46 ? A 28 ? B 45 ? 1 A G 14 1_555 B A 5 1_555 A A 15 1_555 B G 4 1_555 0.001 -0.852 4.381 -3.561 -7.451 -31.652 3.205 -0.806 4.057 13.377 -6.393 -32.684 9 AA_G32A33:G43A44_BB A 32 ? B 44 ? A 33 ? B 43 ? 1 A A 15 1_555 B G 4 1_555 A G 16 1_555 B C 3 1_555 1.231 -1.280 3.911 -1.772 11.446 48.277 -2.497 -1.619 3.497 13.764 2.131 49.566 10 AA_A33G34:C42G43_BB A 33 ? B 43 ? A 34 ? B 42 ? 1 A G 16 1_555 B C 3 1_555 A G 17 1_555 B C 2 1_555 0.479 -0.946 3.424 0.645 21.224 29.833 -4.357 -0.679 2.286 36.046 -1.096 36.478 11 AA_G34G35:C41C42_BB A 34 ? B 42 ? A 35 ? B 41 ? #