HEADER PROTEIN BINDING 18-DEC-09 2KRK TITLE SOLUTION NMR STRUCTURE OF 26S PROTEASE REGULATORY SUBUNIT 8 FROM TITLE 2 H.SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TARGET TITLE 3 HR3102A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 26S PROTEASE REGULATORY SUBUNIT 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 320-395; COMPND 5 SYNONYM: PROTEASOME 26S SUBUNIT ATPASE 5, PROTEASOME SUBUNIT P45, COMPND 6 P45/SUG, THYROID HORMONE RECEPTOR-INTERACTING PROTEIN 1, TRIP1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PSMC5, SUG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 14-15C KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), KEYWDS 2 TARGET HR3102A, PSI-2, PROTEIN STRUCTURE INITIATIVE, ACETYLATION, KEYWDS 3 ATP-BINDING, CYTOPLASM, NUCLEOTIDE-BINDING, NUCLEUS, POLYMORPHISM, KEYWDS 4 PROTEASOME, ATP-DEPENDENT DEGRADATION, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,J.JANJUA,R.XIAO,C.CICCOSANTI,R.SHASTRY,J.K.EVERETT,R.NAIR, AUTHOR 2 T.B.ACTON,B.ROST,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 4 08-MAY-24 2KRK 1 REMARK REVDAT 3 14-JUN-23 2KRK 1 REMARK REVDAT 2 26-FEB-20 2KRK 1 REMARK SEQADV REVDAT 1 12-JAN-10 2KRK 0 JRNL AUTH G.LIU,J.JANJUA,R.XIAO,C.CICCOSANTI,R.SHASTRY,E.K.EVERETT, JRNL AUTH 2 R.NAIR,A.B.ACTON,B.ROST,G.T.MONTELIONE JRNL TITL SOLUTION NMR STRUCTURE OF 26S PROTEASE REGULATORY SUBUNIT 8 JRNL TITL 2 FROM H.SAPIENS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM JRNL TITL 3 TARGET HR3102A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA 3.0, AUTOSTRUCTURE 2.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000101485. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.82 MM [U-100% 13C; U-100% 15N] REMARK 210 HR3102A, 95% H2O/5% D2O; 0.52 MM REMARK 210 [U-10% 13C; U-100% 15N] HR3102A, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D 1H-13C AROM NOESY; 3D REMARK 210 SIMUTANEOUS 13C-AROMATIC,13C- REMARK 210 ALIPHATIC,15N EDITED 1H-1H NOESY; REMARK 210 GFT HABCABCONHN REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA 3.0, AUTOSTRUCTURE REMARK 210 2.1, AUTOASSIGN 2.1, NMRPIPE, REMARK 210 XEASY, TOPSPIN, VNMRJ REMARK 210 METHOD USED : SIMULATED ANNEALING, MOLECULAR REMARK 210 DYNAMICS, AND TORSION ANGLE REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 5 -66.06 -127.63 REMARK 500 1 HIS A 6 95.22 -69.48 REMARK 500 2 HIS A 10 93.64 62.45 REMARK 500 2 MET A 27 -169.95 -108.00 REMARK 500 2 MET A 42 79.69 -118.70 REMARK 500 2 GLN A 83 70.52 54.33 REMARK 500 3 SER A 9 -90.89 -160.39 REMARK 500 3 ASP A 85 -54.76 -123.12 REMARK 500 4 HIS A 5 100.03 -56.66 REMARK 500 4 LYS A 84 92.85 -68.88 REMARK 500 5 PRO A 43 45.35 -74.78 REMARK 500 5 ALA A 45 125.79 59.96 REMARK 500 6 HIS A 3 140.00 -171.69 REMARK 500 6 SER A 9 101.72 67.30 REMARK 500 6 PRO A 43 -80.29 -61.92 REMARK 500 7 ASP A 85 85.04 61.43 REMARK 500 8 HIS A 8 35.96 -82.69 REMARK 500 8 PRO A 43 -82.44 -66.94 REMARK 500 9 HIS A 4 99.41 -65.28 REMARK 500 9 HIS A 10 102.38 -162.06 REMARK 500 9 ARG A 25 7.12 -68.72 REMARK 500 10 HIS A 4 35.76 -87.17 REMARK 500 10 HIS A 6 -29.56 -160.53 REMARK 500 10 ASN A 28 87.29 -69.59 REMARK 500 11 HIS A 10 101.96 62.97 REMARK 500 12 HIS A 10 72.55 59.08 REMARK 500 12 ASP A 85 -71.72 67.39 REMARK 500 13 HIS A 6 -0.62 66.49 REMARK 500 13 ILE A 33 100.23 -58.51 REMARK 500 13 VAL A 81 -62.14 -90.62 REMARK 500 15 HIS A 5 80.89 -68.86 REMARK 500 15 HIS A 10 74.30 55.55 REMARK 500 15 ARG A 25 4.34 -68.99 REMARK 500 15 PRO A 43 -163.99 -58.87 REMARK 500 16 HIS A 4 80.71 -156.48 REMARK 500 16 HIS A 10 70.36 54.46 REMARK 500 16 MET A 42 75.92 -118.63 REMARK 500 16 GLN A 83 71.00 60.70 REMARK 500 17 PRO A 43 -74.10 -67.14 REMARK 500 17 GLN A 83 70.24 51.50 REMARK 500 18 HIS A 4 48.69 -77.25 REMARK 500 18 HIS A 10 75.73 55.31 REMARK 500 18 SER A 46 -169.53 -115.40 REMARK 500 19 HIS A 3 -78.05 -130.36 REMARK 500 19 ASP A 85 89.79 63.88 REMARK 500 20 THR A 30 -173.39 -68.63 REMARK 500 20 GLN A 83 9.01 55.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16640 RELATED DB: BMRB REMARK 900 RELATED ID: HR3102A RELATED DB: TARGETDB DBREF 2KRK A 11 86 UNP P62195 PRS8_HUMAN 320 395 SEQADV 2KRK MET A 1 UNP P62195 EXPRESSION TAG SEQADV 2KRK GLY A 2 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 3 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 4 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 5 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 6 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 7 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 8 UNP P62195 EXPRESSION TAG SEQADV 2KRK SER A 9 UNP P62195 EXPRESSION TAG SEQADV 2KRK HIS A 10 UNP P62195 EXPRESSION TAG SEQRES 1 A 86 MET GLY HIS HIS HIS HIS HIS HIS SER HIS PRO ASN GLU SEQRES 2 A 86 GLU ALA ARG LEU ASP ILE LEU LYS ILE HIS SER ARG LYS SEQRES 3 A 86 MET ASN LEU THR ARG GLY ILE ASN LEU ARG LYS ILE ALA SEQRES 4 A 86 GLU LEU MET PRO GLY ALA SER GLY ALA GLU VAL LYS GLY SEQRES 5 A 86 VAL CYS THR GLU ALA GLY MET TYR ALA LEU ARG GLU ARG SEQRES 6 A 86 ARG VAL HIS VAL THR GLN GLU ASP PHE GLU MET ALA VAL SEQRES 7 A 86 ALA LYS VAL MET GLN LYS ASP SER HELIX 1 1 ASN A 12 SER A 24 1 13 HELIX 2 2 LEU A 35 LEU A 41 1 7 HELIX 3 3 SER A 46 GLU A 64 1 19 HELIX 4 4 THR A 70 GLN A 83 1 14 SHEET 1 A 2 ASN A 28 LEU A 29 0 SHEET 2 A 2 HIS A 68 VAL A 69 1 O VAL A 69 N ASN A 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1