HEADER HYDROLASE INHIBITOR 14-JAN-10 2KSW TITLE BACKBONE 1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR ORYCTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORYCTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 20-85; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTES RHINOCEROS; SOURCE 3 ORGANISM_COMMON: COCONUT RHINOCEROS BEETLE; SOURCE 4 ORGANISM_TAXID: 72550; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS KAZAL-TYPE, PROTEASE INHIBITOR, HYDROLASE INHIBITOR EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.HORITA,J.ISHIBASHI,K.NAGATA,T.MIYAKAWA,M.YAMAKAWA,M.TANOKURA REVDAT 5 13-NOV-24 2KSW 1 REMARK REVDAT 4 14-JUN-23 2KSW 1 REMARK REVDAT 3 26-FEB-20 2KSW 1 REMARK REVDAT 2 13-OCT-10 2KSW 1 JRNL REVDAT 1 14-JUL-10 2KSW 0 JRNL AUTH S.HORITA,J.ISHIBASHI,K.NAGATA,T.MIYAKAWA,M.YAMAKAWA, JRNL AUTH 2 M.TANOKURA JRNL TITL ISOLATION, CDNA CLONING, AND STRUCTURE-BASED FUNCTIONAL JRNL TITL 2 CHARACTERIZATION OF ORYCTIN, A HEMOLYMPH PROTEIN FROM THE JRNL TITL 3 COCONUT RHINOCEROS BEETLE, ORYCTES RHINOCEROS, AS A NOVEL JRNL TITL 4 SERINE PROTEASE INHIBITOR JRNL REF J.BIOL.CHEM. V. 285 30150 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20630859 JRNL DOI 10.1074/JBC.M110.124735 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000101532. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM [U-100% 13C; U-100% 15N] REMARK 210 ORYCTIN-1, 100 MM SODIUM REMARK 210 CHLORIDE-2, 10 % D2O-3, 90 % H2O- REMARK 210 4, 50 MM SODIUM PHOSPHATE-5, REMARK 210 0.02 W/V SODIUM AZIDE-6, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D C(CO)NH; 3D HNCO; 3D HNCA; 3D REMARK 210 HNCACB; 3D HN(CO)CA; 3D H(CCO)NH; REMARK 210 3D HCCH-TOCSY; 3D 1H-15N NOESY; REMARK 210 3D HCCH-COSY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 3 72.14 -153.88 REMARK 500 1 LYS A 10 11.90 -142.18 REMARK 500 1 LEU A 11 88.25 178.27 REMARK 500 1 ASP A 15 -179.94 -179.72 REMARK 500 1 LYS A 26 -69.08 -141.08 REMARK 500 1 TYR A 52 29.25 -163.06 REMARK 500 2 VAL A 3 133.17 -173.45 REMARK 500 2 SER A 5 37.26 -94.66 REMARK 500 2 LYS A 10 19.59 -151.24 REMARK 500 2 LEU A 11 125.24 -179.72 REMARK 500 2 LEU A 16 50.02 -113.78 REMARK 500 2 LYS A 26 -66.33 -133.69 REMARK 500 3 SER A 5 26.01 -141.53 REMARK 500 3 LYS A 10 -33.92 -179.07 REMARK 500 3 LEU A 16 50.21 -117.66 REMARK 500 3 LYS A 26 -69.86 -127.28 REMARK 500 3 ASN A 44 79.68 -150.92 REMARK 500 4 VAL A 3 145.91 -178.33 REMARK 500 4 LEU A 11 110.94 -177.24 REMARK 500 4 LEU A 50 164.22 62.25 REMARK 500 5 LYS A 10 -34.72 -178.18 REMARK 500 5 LYS A 26 -74.89 -140.74 REMARK 500 5 TYR A 52 41.51 -98.45 REMARK 500 5 PRO A 64 86.12 -69.72 REMARK 500 6 ASP A 6 -39.29 -130.28 REMARK 500 6 LYS A 10 17.62 -148.20 REMARK 500 6 LEU A 11 110.70 -179.44 REMARK 500 6 LYS A 26 -70.95 -133.34 REMARK 500 6 ILE A 28 96.06 -62.25 REMARK 500 6 TYR A 52 31.83 -173.33 REMARK 500 6 PRO A 64 97.57 -69.75 REMARK 500 7 SER A 5 -36.68 -174.82 REMARK 500 7 LYS A 10 20.43 -153.42 REMARK 500 7 LEU A 11 109.92 179.35 REMARK 500 7 LYS A 26 -69.19 -163.63 REMARK 500 7 TYR A 52 66.12 -169.31 REMARK 500 8 VAL A 3 17.94 -147.61 REMARK 500 8 SER A 5 41.66 -97.63 REMARK 500 8 ASP A 6 -75.93 -128.05 REMARK 500 8 LEU A 11 121.46 -179.44 REMARK 500 8 ASP A 15 -170.71 -179.68 REMARK 500 8 PRO A 64 97.73 -69.76 REMARK 500 9 VAL A 3 126.61 -176.91 REMARK 500 9 LEU A 11 120.66 -179.58 REMARK 500 9 ASP A 15 -169.63 -60.51 REMARK 500 9 LEU A 16 39.99 -143.55 REMARK 500 9 LYS A 26 -69.35 -141.58 REMARK 500 9 ILE A 28 93.99 -62.39 REMARK 500 9 TYR A 52 34.01 -178.53 REMARK 500 10 LYS A 10 12.07 -141.65 REMARK 500 REMARK 500 THIS ENTRY HAS 109 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16676 RELATED DB: BMRB DBREF 2KSW A 1 66 UNP O96050 O96050_ORYRH 20 85 SEQRES 1 A 66 VAL PRO VAL GLY SER ASP CYS GLU PRO LYS LEU CYS THR SEQRES 2 A 66 MET ASP LEU VAL PRO HIS CYS PHE LEU ASN PRO GLU LYS SEQRES 3 A 66 GLY ILE VAL VAL VAL HIS GLY GLY CYS ALA LEU SER LYS SEQRES 4 A 66 TYR LYS CYS GLN ASN PRO ASN HIS GLU LYS LEU GLY TYR SEQRES 5 A 66 THR HIS GLU CYS GLU GLU ALA ILE LYS ASN ALA PRO ARG SEQRES 6 A 66 PRO HELIX 1 1 GLY A 33 ASN A 44 1 12 HELIX 2 2 THR A 53 GLU A 57 5 5 HELIX 3 3 GLU A 58 ALA A 63 1 6 SHEET 1 A 2 HIS A 19 LEU A 22 0 SHEET 2 A 2 ILE A 28 VAL A 31 -1 O VAL A 31 N HIS A 19 SSBOND 1 CYS A 7 CYS A 42 1555 1555 2.16 SSBOND 2 CYS A 12 CYS A 35 1555 1555 1.97 SSBOND 3 CYS A 20 CYS A 56 1555 1555 1.96 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1