HEADER ANTIMICROBIAL PROTEIN 18-FEB-10 2KUJ OBSLTE 02-MAY-12 2KUJ 2LRE TITLE THE SOLUTION STRUCTURE OF THE DIMERIC ACANTHAPORIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACANTHAPORIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACANTHAMOEBA CULBERTSONI; SOURCE 3 ORGANISM_TAXID: 43142; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C43; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS ANTIMICROBIAL PEPTIDE, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.MICHALEK,R.WECHSELBERGER,F.SOENNICHSEN,A.J.DINGLEY,H.WIENK, AUTHOR 2 M.SIMANSKI,R.HERBST,I.LORENZEN,C.GELHAUS,J.GROETZINGER,M.LEIPPE REVDAT 2 02-MAY-12 2KUJ 1 OBSLTE VERSN REVDAT 1 23-FEB-11 2KUJ 0 JRNL AUTH M.MICHALEK,R.WECHSELBERGER,F.SOENNICHSEN,A.J.DINGLEY, JRNL AUTH 2 H.WIENK,M.SIMANSKI,R.HERBST,I.LORENZEN,C.GELHAUS, JRNL AUTH 3 J.GROETZINGER,M.LEIPPE JRNL TITL THE SOLUTION STRUCTURE OF THE DIMERIC ACANTHAPORIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DIANA 2.1 REMARK 3 AUTHORS : GUNTERT, BRAUN AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KUJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-10. REMARK 100 THE RCSB ID CODE IS RCSB101589. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 8.0 REMARK 210 IONIC STRENGTH : 0.025 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 15N] PROTEIN, 93% REMARK 210 H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DIANA 2.1, NMRPIPE 2.1, NMRVIEW REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 2 139.09 68.79 REMARK 500 1 LYS A 4 -88.04 -77.01 REMARK 500 1 CYS A 5 -78.98 -85.49 REMARK 500 1 SER A 6 -150.77 -161.34 REMARK 500 1 VAL A 7 -79.04 -77.76 REMARK 500 1 ALA A 12 69.86 74.43 REMARK 500 1 ALA A 14 31.78 -167.16 REMARK 500 1 ALA A 15 -66.01 -108.83 REMARK 500 1 ILE A 27 90.26 34.21 REMARK 500 1 LEU A 29 -49.30 159.41 REMARK 500 1 LEU A 36 -75.60 -68.49 REMARK 500 1 ALA A 38 57.57 163.84 REMARK 500 1 ALA A 39 -29.34 163.06 REMARK 500 1 GLU A 40 53.74 86.54 REMARK 500 1 SER A 44 39.24 -98.16 REMARK 500 1 CYS A 45 -76.11 -143.00 REMARK 500 1 PHE A 46 -83.80 -73.26 REMARK 500 1 HIS A 52 96.94 -175.26 REMARK 500 1 VAL A 54 18.48 -145.27 REMARK 500 1 LEU A 58 45.81 -142.03 REMARK 500 1 HIS A 59 90.38 40.17 REMARK 500 1 LEU A 60 18.66 -142.88 REMARK 500 1 MET B 229 139.07 68.75 REMARK 500 1 LYS B 231 -88.04 -76.93 REMARK 500 1 CYS B 232 -78.83 -85.52 REMARK 500 1 SER B 233 -150.80 -161.57 REMARK 500 1 VAL B 234 -79.18 -77.73 REMARK 500 1 ALA B 239 69.85 74.52 REMARK 500 1 ALA B 241 31.68 -167.15 REMARK 500 1 ALA B 242 -65.91 -108.80 REMARK 500 1 ILE B 254 90.24 34.36 REMARK 500 1 LEU B 256 -48.67 158.26 REMARK 500 1 LEU B 263 -75.58 -68.60 REMARK 500 1 ALA B 265 57.35 163.59 REMARK 500 1 ALA B 266 -29.35 163.18 REMARK 500 1 GLU B 267 53.41 86.43 REMARK 500 1 SER B 271 39.28 -98.11 REMARK 500 1 CYS B 272 -76.05 -143.09 REMARK 500 1 PHE B 273 -83.70 -73.29 REMARK 500 1 HIS B 279 97.96 -175.52 REMARK 500 1 VAL B 281 18.53 -145.43 REMARK 500 1 LEU B 285 46.07 -142.09 REMARK 500 1 HIS B 286 90.43 39.96 REMARK 500 1 LEU B 287 18.61 -142.84 REMARK 500 2 SER A 6 -174.78 -52.48 REMARK 500 2 ALA A 12 75.45 177.42 REMARK 500 2 ALA A 15 -86.01 -93.45 REMARK 500 2 ILE A 17 -70.06 -122.67 REMARK 500 2 VAL A 21 -62.68 -105.27 REMARK 500 2 ILE A 27 153.50 56.86 REMARK 500 REMARK 500 THIS ENTRY HAS 777 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KU8 RELATED DB: PDB REMARK 900 MONOMERIC CULBERTCIDIN REMARK 900 RELATED ID: 16727 RELATED DB: BMRB REMARK 900 MONOMERIC CULBERTCIDIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY REMARK 999 EXIST. DBREF 2KUJ A 1 61 PDB 2KUJ 2KUJ 1 61 DBREF 2KUJ B 228 288 PDB 2KUJ 2KUJ 1 61 SEQRES 1 A 61 ALA MET GLY LYS CYS SER VAL LEU LYS LYS VAL ALA CYS SEQRES 2 A 61 ALA ALA ALA ILE ALA GLY ALA VAL ALA ALA CYS GLY GLY SEQRES 3 A 61 ILE ASP LEU PRO CYS VAL LEU ALA ALA LEU LYS ALA ALA SEQRES 4 A 61 GLU GLY CYS ALA SER CYS PHE CYS GLU ASP HIS CYS HIS SEQRES 5 A 61 GLY VAL CYS LYS ASP LEU HIS LEU CYS SEQRES 1 B 61 ALA MET GLY LYS CYS SER VAL LEU LYS LYS VAL ALA CYS SEQRES 2 B 61 ALA ALA ALA ILE ALA GLY ALA VAL ALA ALA CYS GLY GLY SEQRES 3 B 61 ILE ASP LEU PRO CYS VAL LEU ALA ALA LEU LYS ALA ALA SEQRES 4 B 61 GLU GLY CYS ALA SER CYS PHE CYS GLU ASP HIS CYS HIS SEQRES 5 B 61 GLY VAL CYS LYS ASP LEU HIS LEU CYS HELIX 1 1 VAL A 32 LYS A 37 1 6 HELIX 2 2 CYS A 55 HIS A 59 5 5 HELIX 3 3 VAL B 259 LYS B 264 1 6 HELIX 4 4 CYS B 282 HIS B 286 5 5 SSBOND 1 CYS A 5 CYS A 42 1555 1555 2.10 SSBOND 2 CYS A 13 CYS A 45 1555 1555 2.03 SSBOND 3 CYS A 24 CYS A 31 1555 1555 2.00 SSBOND 4 CYS A 47 CYS A 61 1555 1555 1.95 SSBOND 5 CYS A 47 CYS A 55 1555 1555 1.95 SSBOND 6 CYS A 47 CYS A 51 1555 1555 2.90 SSBOND 7 CYS A 51 CYS A 61 1555 1555 2.10 SSBOND 8 CYS A 55 CYS A 61 1555 1555 2.12 SSBOND 9 CYS B 232 CYS B 269 1555 1555 2.10 SSBOND 10 CYS B 240 CYS B 272 1555 1555 2.02 SSBOND 11 CYS B 251 CYS B 258 1555 1555 2.00 SSBOND 12 CYS B 274 CYS B 282 1555 1555 1.95 SSBOND 13 CYS B 274 CYS B 288 1555 1555 1.96 SSBOND 14 CYS B 274 CYS B 278 1555 1555 2.91 SSBOND 15 CYS B 278 CYS B 288 1555 1555 2.10 SSBOND 16 CYS B 282 CYS B 288 1555 1555 2.12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 2 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 3 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 4 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 5 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 6 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 7 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 8 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 9 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 10 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 11 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 12 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 13 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 14 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 15 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 16 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 17 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 18 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 19 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL MODEL 20 TER 818 CYS A 61 TER 1636 CYS B 288 ENDMDL CONECT 62 546 CONECT 188 577 CONECT 310 398 CONECT 398 310 CONECT 546 62 CONECT 577 188 CONECT 607 662 713 813 CONECT 662 607 813 CONECT 713 607 813 CONECT 813 607 662 713 CONECT 880 1364 CONECT 1006 1395 CONECT 1128 1216 CONECT 1216 1128 CONECT 1364 880 CONECT 1395 1006 CONECT 1425 1480 1531 1631 CONECT 1480 1425 1631 CONECT 1531 1425 1631 CONECT 1631 1425 1480 1531 MASTER 145 0 0 4 0 0 0 6 816 2 20 10 END