HEADER HORMONE 16-MAR-10 2KVK TITLE SOLUTION STRUCTURE OF ADF/COFILIN (LDCOF) FROM LEISHMANIA DONOVANI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN SEVERING AND DYNAMICS REGULATORY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA DONOVANI; SOURCE 3 ORGANISM_TAXID: 5661; SOURCE 4 GENE: COFILIN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 21D KEYWDS ADF/COFILIN, LEISHMANIA DONOVANI, HORMONE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR P.P.PATHAK,S.V.PULAVARTI,A.JAIN,A.A.SAHASRABUDDHE,C.M.GUPTA,A.ARORA REVDAT 3 01-MAY-24 2KVK 1 REMARK SEQADV REVDAT 2 10-NOV-10 2KVK 1 JRNL REVDAT 1 28-JUL-10 2KVK 0 SPRSDE 28-JUL-10 2KVK 2KD5 JRNL AUTH P.P.PATHAK,S.V.S.R.PULAVARTI,A.JAIN,A.A.SAHASRABUDDHE, JRNL AUTH 2 C.M.GUPTA,A.ARORA JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF ADF/COFILIN FROM JRNL TITL 2 LEISHMANIA DONOVANI JRNL REF J.STRUCT.BIOL. V. 172 219 2010 JRNL REFN ISSN 1047-8477 JRNL PMID 20627129 JRNL DOI 10.1016/J.JSB.2010.07.001 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.P.PATHAK,S.V.PULAVARTI,A.JAIN,A.A.SAHASRABUDDHE,C.M.GUPTA, REMARK 1 AUTH 2 A.ARORA REMARK 1 TITL NMR ASSIGNMENT OF ACTIN DEPOLYMERIZING AND DYNAMICS REMARK 1 TITL 2 REGULATORY PROTEIN FROM LEISHMANIA DONOVANI REMARK 1 REF BIOMOL.NMR ASSIGN. V. 3 265 2009 REMARK 1 REFN ISSN 1874-2718 REMARK 1 PMID 19844807 REMARK 1 DOI 10.1007/S12104-009-9190-4 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA 3.0, TALOS TALOS+, CING REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA), CORNILESCU, DELAGLIO AND BAX (TALOS), REMARK 3 VUISTER ET AL. (CING) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000101626. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM SODIUM PHOSPHATE; 50MM REMARK 210 SODIUM CHLORIDE; 0.1% SODIUM REMARK 210 AZIDE; 1MM AEBSF PROTEASE REMARK 210 INHIBITOR; 1MM DTT; 95% H2O/5% REMARK 210 D2O; 20MM SODIUM PHOSPHATE; 50MM REMARK 210 SODIUM CHLORIDE; 0.1% SODIUM REMARK 210 AZIDE; 1MM AEBSF PROTEASE REMARK 210 INHIBITOR; 1MM DTT; 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 HCCH-TOCSY; 3D H(CCO)NH; 3D C(CO) REMARK 210 NH; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 2D HB(CBCGCD)HD; 2D REMARK 210 HB(CBCGCE)HE; 2D 1H-13C HSQC REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRDRAW, CARA 1.8.4, TALOS REMARK 210 TALOS+, CYANA 3.0, PSVS 1.4 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 18 HG SER A 24 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 -58.18 -134.01 REMARK 500 1 ARG A 25 -40.54 -133.16 REMARK 500 1 ASP A 89 8.18 -67.09 REMARK 500 2 LYS A 36 -70.57 -83.96 REMARK 500 2 GLU A 60 -72.57 -101.99 REMARK 500 2 LYS A 61 147.06 -172.95 REMARK 500 2 LEU A 143 28.19 -159.34 REMARK 500 3 ILE A 3 43.95 -107.13 REMARK 500 3 GLU A 45 -155.75 -108.73 REMARK 500 3 PHE A 57 106.53 -53.55 REMARK 500 3 SER A 58 56.88 -154.79 REMARK 500 3 GLU A 60 5.32 -55.38 REMARK 500 4 ALA A 2 -67.00 -125.39 REMARK 500 4 LYS A 36 -83.97 -88.86 REMARK 500 4 LYS A 56 30.22 -96.98 REMARK 500 4 PRO A 62 -179.62 -61.10 REMARK 500 5 LYS A 36 -63.77 -90.02 REMARK 500 5 LEU A 124 69.78 -106.50 REMARK 500 6 ARG A 25 -39.39 -130.10 REMARK 500 6 SER A 58 54.50 -158.25 REMARK 500 6 THR A 59 -61.17 -100.24 REMARK 500 6 GLU A 60 -69.14 -136.94 REMARK 500 7 ARG A 25 -42.49 -149.63 REMARK 500 7 LYS A 36 -72.98 -72.23 REMARK 500 7 GLU A 45 -155.02 -91.59 REMARK 500 7 SER A 58 56.15 -157.64 REMARK 500 7 THR A 59 -63.21 -96.84 REMARK 500 7 GLU A 60 -67.38 -138.06 REMARK 500 7 LEU A 143 -81.14 -91.77 REMARK 500 8 SER A 58 50.95 -159.88 REMARK 500 8 THR A 59 -63.57 -101.00 REMARK 500 8 GLU A 60 -70.90 -138.18 REMARK 500 8 LYS A 61 32.58 -156.00 REMARK 500 9 LEU A 143 114.05 -170.37 REMARK 500 10 ALA A 142 -69.17 75.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 ARG A 25 0.10 SIDE CHAIN REMARK 500 3 ARG A 46 0.11 SIDE CHAIN REMARK 500 3 ARG A 134 0.11 SIDE CHAIN REMARK 500 5 ARG A 94 0.08 SIDE CHAIN REMARK 500 6 ARG A 25 0.08 SIDE CHAIN REMARK 500 7 ARG A 46 0.08 SIDE CHAIN REMARK 500 10 ARG A 20 0.07 SIDE CHAIN REMARK 500 10 ARG A 25 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15557 RELATED DB: BMRB DBREF 2KVK A 1 142 UNP Q2QKR1 Q2QKR1_LEIDO 1 142 SEQADV 2KVK LEU A 143 UNP Q2QKR1 EXPRESSION TAG SEQADV 2KVK GLU A 144 UNP Q2QKR1 EXPRESSION TAG SEQRES 1 A 144 MET ALA ILE SER GLY VAL THR LEU GLU GLU SER VAL ARG SEQRES 2 A 144 GLY ALA ILE ASP ASP LEU ARG MET LYS LYS SER ARG TYR SEQRES 3 A 144 VAL MET MET CYS ILE GLY ALA ASP GLY LYS LYS ILE GLU SEQRES 4 A 144 VAL THR GLU VAL GLY GLU ARG SER VAL ASN TYR THR ASP SEQRES 5 A 144 LEU LYS GLU LYS PHE SER THR GLU LYS PRO CYS TYR VAL SEQRES 6 A 144 ALA PHE ASP PHE GLU TYR ASN ASP ALA GLY SER LYS ARG SEQRES 7 A 144 GLU LYS LEU ILE LEU ILE GLN TRP ILE PRO ASP THR ALA SEQRES 8 A 144 ARG PRO ARG GLU LYS MET MET TYR SER ALA SER ARG ASP SEQRES 9 A 144 ALA LEU SER SER VAL SER GLU GLY TYR LEU PRO ILE GLN SEQRES 10 A 144 ALA ASN ASP GLU SER GLY LEU ASP ALA GLU GLU ILE ILE SEQRES 11 A 144 ARG LYS VAL ARG LEU HIS ARG SER VAL ALA ALA ALA LEU SEQRES 12 A 144 GLU HELIX 1 1 GLU A 9 MET A 21 1 13 HELIX 2 2 ASN A 49 LYS A 56 1 8 HELIX 3 3 ARG A 92 SER A 110 1 19 HELIX 4 4 ASP A 120 LEU A 124 5 5 HELIX 5 5 ASP A 125 ALA A 141 1 17 SHEET 1 A 6 THR A 7 LEU A 8 0 SHEET 2 A 6 LYS A 37 GLY A 44 1 O ILE A 38 N THR A 7 SHEET 3 A 6 TYR A 26 ILE A 31 -1 N CYS A 30 O GLU A 39 SHEET 4 A 6 TYR A 64 ASP A 73 -1 O ALA A 66 N VAL A 27 SHEET 5 A 6 SER A 76 TRP A 86 -1 O ILE A 82 N PHE A 67 SHEET 6 A 6 TYR A 113 ALA A 118 1 O ILE A 116 N LEU A 83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1