HEADER PHOTOSYNTHESIS 22-MAR-10 2KVO TITLE SOLUTION NMR STRUCTURE OF PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN TITLE 2 FROM SYNECHOCYSTIS SP.(STRAIN PCC 6803), NORTHEAST STRUCTURAL TITLE 3 GENOMICS CONSORTIUM TARGET SGR171 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOTOSYSTEM II REACTION CENTER W PROTEIN, PHOTOSYSTEM II 13 COMPND 5 KDA PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 STRAIN: PCC 6803; SOURCE 5 GENE: PSB28, PSBW, SLL1398; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 21-23C; SOURCE 11 OTHER_DETAILS: C-TAG: LEHHHHHH KEYWDS PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN, MEMBRANE, KEYWDS 2 PHOTOSYNTHESIS, PHOTOSYSTEM II, THYLAKOID, STRUCTURAL GENOMICS, PSI- KEYWDS 3 2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 4 CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.YANG,T.A.RAMELOT,J.R.CORT,D.WANG,C.CICCOSANTI,K.HAMILTON,R.NAIR, AUTHOR 2 B.ROST,T.B.ACTON,R.XIAO,J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 01-MAY-24 2KVO 1 REMARK REVDAT 2 13-JUL-11 2KVO 1 JRNL REVDAT 1 07-APR-10 2KVO 0 JRNL AUTH Y.YANG,T.A.RAMELOT,J.R.CORT,D.WANG,C.CICCOSANTI,K.HAMILTON, JRNL AUTH 2 R.NAIR,B.ROST,T.B.ACTON,R.XIAO,J.K.EVERETT,G.T.MONTELIONE, JRNL AUTH 3 M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF PHOTOSYSTEM II REACTION CENTER JRNL TITL 2 PROTEIN PSB28 FROM SYNECHOCYSTIS SP. STRAIN PCC 6803. JRNL REF PROTEINS V. 79 340 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 21058299 JRNL DOI 10.1002/PROT.22876 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2008, CNS 1.2, PSVS 1.4 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS), BHATTACHARYA AND MONTELIONE (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: XPLOR-NIH-2.20 WITH HBDB REMARK 4 REMARK 4 2KVO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000101630. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.58 MM [U-100% 13C; U-100% 15N] REMARK 210 PHOTOSYSTEM II REACTION CENTER REMARK 210 PSB28 PROTEIN FROM SYNECHOCYSTIS REMARK 210 SP.(STRAIN PCC 6803), 20 MM MES, REMARK 210 100 MM SODIUM CHLORIDE, 5 MM REMARK 210 CALCIUM CHLORIDE, 10 MM DTT, REMARK 210 0.02 % SODIUM AZIDE, 90% H2O/10% REMARK 210 D2O; 0.44 MM [U-5% 13C; U-100% REMARK 210 15N] PHOTOSYSTEM II REACTION REMARK 210 CENTER PSB28 PROTEIN FROM REMARK 210 SYNECHOCYSTIS SP.(STRAIN PCC REMARK 210 6803), 20 MM MES, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM CALCIUM CHLORIDE, REMARK 210 10 MM DTT, 0.02 % SODIUM AZIDE, REMARK 210 90% H2O/10% D2O; 0.58 MM [U-100% REMARK 210 13C; U-100% 15N] PHOTOSYSTEM II REMARK 210 REACTION CENTER PSB28 PROTEIN REMARK 210 FROM SYNECHOCYSTIS SP.(STRAIN REMARK 210 PCC 6803), 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 10 MM DTT, 0.02 % REMARK 210 SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C REMARK 210 HSQC_CT; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY; 3D HNCO; 3D HNCA; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D HN(CO) REMARK 210 CA; 3D HBHA(CO)NH; 3D H(CCO)NH; REMARK 210 3D C(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 HCCH-COSY; 4D CC NOESY; 2D 1H- REMARK 210 15N HSQC_SWN150PPM REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, TOPSPIN 2.1.4, REMARK 210 AUTOSTRUCTURE 2.2.1, X-PLOR NIH REMARK 210 2.20, SPARKY 3.113, AUTOASSIGN REMARK 210 2.30, PDBSTAT 5.1, PINE SERVER REMARK 210 1.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H3 MET A 1 H ALA A 2 1.27 REMARK 500 H1 MET A 1 HH22 ARG A 99 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 7 22.56 -150.64 REMARK 500 1 LYS A 8 120.52 56.53 REMARK 500 1 GLN A 27 -91.40 -80.23 REMARK 500 1 ILE A 40 0.34 -59.96 REMARK 500 1 LYS A 43 -73.28 -93.59 REMARK 500 1 GLU A 58 -76.42 -88.91 REMARK 500 1 THR A 76 -29.90 -152.83 REMARK 500 1 LEU A 84 55.30 -108.40 REMARK 500 1 PRO A 88 -17.48 -48.51 REMARK 500 1 LEU A 106 1.57 58.05 REMARK 500 1 GLU A 112 -62.65 65.31 REMARK 500 2 ALA A 2 -89.70 32.10 REMARK 500 2 SER A 7 80.31 -155.21 REMARK 500 2 LYS A 8 -168.98 43.14 REMARK 500 2 VAL A 10 -94.60 -78.01 REMARK 500 2 ALA A 11 55.80 175.67 REMARK 500 2 LYS A 24 14.04 44.57 REMARK 500 2 GLN A 27 -56.38 -151.06 REMARK 500 2 GLU A 37 58.88 39.35 REMARK 500 2 ASP A 57 5.26 54.86 REMARK 500 2 GLU A 58 -105.46 -146.75 REMARK 500 2 THR A 76 -34.06 -154.34 REMARK 500 2 ASN A 104 -150.45 -137.09 REMARK 500 2 LEU A 106 26.37 39.07 REMARK 500 2 SER A 109 -137.07 -160.66 REMARK 500 2 LYS A 110 81.56 -66.77 REMARK 500 2 SER A 111 -75.19 -160.40 REMARK 500 2 LEU A 113 -63.19 -99.85 REMARK 500 2 HIS A 116 91.19 55.57 REMARK 500 2 HIS A 119 -167.26 41.97 REMARK 500 3 ALA A 2 89.35 44.75 REMARK 500 3 ALA A 11 96.89 168.85 REMARK 500 3 THR A 13 -9.41 70.08 REMARK 500 3 LYS A 24 128.71 -39.45 REMARK 500 3 GLU A 37 71.85 40.32 REMARK 500 3 LYS A 43 -73.18 -99.73 REMARK 500 3 ILE A 49 -87.33 -88.11 REMARK 500 3 THR A 50 -40.36 66.94 REMARK 500 3 GLU A 58 -77.40 -87.19 REMARK 500 3 ASN A 72 93.22 -38.89 REMARK 500 3 LEU A 106 -159.58 56.28 REMARK 500 3 PHE A 108 94.04 39.55 REMARK 500 3 GLU A 112 -30.55 64.52 REMARK 500 3 HIS A 116 -176.79 54.92 REMARK 500 3 HIS A 119 92.96 44.93 REMARK 500 4 ALA A 2 93.48 41.77 REMARK 500 4 GLU A 12 43.50 -101.32 REMARK 500 4 SER A 23 3.03 -178.30 REMARK 500 4 GLN A 27 -36.44 -153.70 REMARK 500 4 SER A 28 110.54 -170.34 REMARK 500 REMARK 500 THIS ENTRY HAS 334 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SGR171 RELATED DB: TARGETDB DBREF 2KVO A 1 112 UNP Q55356 PSB28_SYNY3 1 112 SEQADV 2KVO LEU A 113 UNP Q55356 EXPRESSION TAG SEQADV 2KVO GLU A 114 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 115 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 116 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 117 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 118 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 119 UNP Q55356 EXPRESSION TAG SEQADV 2KVO HIS A 120 UNP Q55356 EXPRESSION TAG SEQRES 1 A 120 MET ALA GLU ILE GLN PHE SER LYS GLY VAL ALA GLU THR SEQRES 2 A 120 VAL VAL PRO GLU VAL ARG LEU SER LYS SER LYS ASN GLY SEQRES 3 A 120 GLN SER GLY MET ALA LYS PHE TYR PHE LEU GLU PRO THR SEQRES 4 A 120 ILE LEU ALA LYS GLU SER THR ASP ASP ILE THR GLY MET SEQRES 5 A 120 TYR LEU ILE ASP ASP GLU GLY GLU ILE ILE THR ARG GLU SEQRES 6 A 120 VAL LYS GLY LYS PHE ILE ASN GLY ARG PRO THR ALA ILE SEQRES 7 A 120 GLU ALA THR VAL ILE LEU ASN SER GLN PRO GLU TRP ASP SEQRES 8 A 120 ARG PHE MET ARG PHE MET GLU ARG TYR GLY ALA GLU ASN SEQRES 9 A 120 GLY LEU GLY PHE SER LYS SER GLU LEU GLU HIS HIS HIS SEQRES 10 A 120 HIS HIS HIS HELIX 1 1 PRO A 38 ALA A 42 5 5 HELIX 2 2 SER A 45 ILE A 49 5 5 HELIX 3 3 GLN A 87 ASN A 104 1 18 SHEET 1 A 3 GLU A 3 GLN A 5 0 SHEET 2 A 3 MET A 52 ILE A 55 -1 O TYR A 53 N GLN A 5 SHEET 3 A 3 GLU A 60 THR A 63 -1 O THR A 63 N MET A 52 SHEET 1 B 4 GLU A 17 LYS A 22 0 SHEET 2 B 4 GLY A 29 LEU A 36 -1 O LYS A 32 N ARG A 19 SHEET 3 B 4 ARG A 74 LEU A 84 -1 O LEU A 84 N GLY A 29 SHEET 4 B 4 VAL A 66 ILE A 71 -1 N LYS A 67 O GLU A 79 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1