HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-MAR-10 2KVS TITLE NMR SOLUTION STRUCTURE OF Q7A1E8 PROTEIN FROM STAPHYLOCOCCUS AUREUS: TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET: ZR215 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN MW0776; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 196620; SOURCE 4 STRAIN: MW2; SOURCE 5 GENE: MW0776; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: XL10; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21 KEYWDS PSI-2, NESG, BIG TARGET, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.V.T.SWAPNA,A.F.MONTELIONE,D.WANG,C.CICCOSANTI,H.JANJUA,R.XIAO, AUTHOR 2 T.B.ACTON,B.ROST,J.EVERETT,G.T.MONTELIONE,NORTHEAST STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (NESG) REVDAT 3 14-JUN-23 2KVS 1 REMARK REVDAT 2 05-FEB-20 2KVS 1 REMARK SEQADV REVDAT 1 14-APR-10 2KVS 0 JRNL AUTH G.V.T.SWAPNA,A.F.MONTELIONE,D.WANG,C.CICCOSANTI,H.JANJUA, JRNL AUTH 2 R.XIAO,T.B.ACTON,B.ROST,J.EVERETT,G.T.MONTELIONE JRNL TITL NMR SOLUTION STRUCTURE OF Q7A1E8 PROTEIN FROM STAPHYLOCOCCUS JRNL TITL 2 AUREUS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET: JRNL TITL 3 ZR215 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AUTOASSIGN 2.1, CNS REMARK 3 AUTHORS : ZIMMERMAN, MOSELEY, KULIKOWSKI AND MONTELIONE REMARK 3 (AUTOASSIGN), BRUNGER, ADAMS, CLORE, GROS, NILGES REMARK 3 AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 400 STRUCTURES WERE CALCULATED AND 20 REMARK 3 BEST CONFORMERS WERE THEN REFINED IN A SHELL OF WATER USING CNS. REMARK 3 INITIAL DIHEDRAL ANGLE CONSTRIANTS WERE OBTAINED FROM TALOS. REMARK 3 FINAL QUALITY FACTORS DETERMINED USING PSVS SOFTWARE. ORDERED REMARK 3 RESIDUES WERE DEFINED AS 8-12,18-30,35-37,43-77.RMSD(ORDERED REMARK 3 RESIDUES):BACKBONE 1.0A, ALL ATOMS 1.5A; RAMACHANDRAN STATISTICS REMARK 3 FOR ALL ORDERED REGIONS: MOST FAVORED REGIONS: 91.5%; REMARK 3 ADDITIONALLY ALLOWED: 8.4% AND GENEROUSLY ALLOWED: 0.1%. REMARK 3 PROCHECK SCORES FOR ALL ORDERED RESIDUES ARE (RAW/Z): PHI-PSI REMARK 3 0.11/0.75 ALL:0.04/0.24; MOLPROBITY CLASH SCORE(RAW/Z):13.45/- REMARK 3 0.78; RPF SCORES FOR GOODNESS OF FIT OF NOESY DATA: RECALL: REMARK 3 0.954; PRECISION:0.928; F-MEASURE: 0.941; DP-SCORE 0.798. REMARK 4 REMARK 4 2KVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000101634. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.71 MM [U-100% 13C; U-100% 15N] REMARK 210 ZR215-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HNCO; 3D HNHA; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 2D 1H-15N HNOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2008, SPARKY 2.3, VNMRJ REMARK 210 2.1B, TOPSPIN 2.1, AUTOSTRUCTURE REMARK 210 2.2.1, CYANA 2.1, AVS, PSVS 1.3, REMARK 210 TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE RESONANCE NMR REMARK 210 SPECTROSCOPY. AUTOMATED RESONANCE ASSIGNMENTS WERE MADE USING REMARK 210 AUTOASSIGN. SIDECHAIN ASSIGNMENTS WERE COMPLETED MANUALLY. REMARK 210 CHEMICAL SHIFT ASSIGNMENTS WERE VALIDATED USING AVS SOFTWARE. REMARK 210 AUTOMATED NOESY ASSIGNMENTS WERE MADE USING AUTOSTRUCTURE AND REMARK 210 STRUCTURE SOLUTION WAS DETERMINED USING CYANA-2.1. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 17 -49.84 -173.03 REMARK 500 1 ASN A 19 86.81 -68.21 REMARK 500 1 ARG A 37 -69.39 -123.82 REMARK 500 1 LEU A 38 69.59 -169.15 REMARK 500 1 GLU A 39 -70.27 -78.61 REMARK 500 1 GLU A 40 -69.46 64.53 REMARK 500 1 MET A 70 -62.06 -97.18 REMARK 500 2 ASP A 4 83.33 56.29 REMARK 500 2 MET A 6 -82.78 56.69 REMARK 500 2 THR A 7 -79.35 39.72 REMARK 500 2 ASN A 19 89.73 -68.20 REMARK 500 2 GLU A 31 -147.43 -98.37 REMARK 500 2 ASP A 32 -73.25 69.52 REMARK 500 2 LYS A 33 -36.42 -151.98 REMARK 500 2 LEU A 38 79.93 177.82 REMARK 500 2 ASN A 52 -60.68 -107.23 REMARK 500 2 HIS A 78 96.50 65.13 REMARK 500 3 ASN A 17 36.35 -79.85 REMARK 500 3 ASN A 19 89.81 -64.66 REMARK 500 3 ASP A 32 -83.22 -62.36 REMARK 500 3 LYS A 33 -48.74 -151.10 REMARK 500 3 PRO A 36 109.54 -58.81 REMARK 500 3 LEU A 38 -33.72 -157.22 REMARK 500 3 ASN A 52 -66.88 -132.74 REMARK 500 4 ASP A 4 111.08 62.02 REMARK 500 4 PRO A 5 38.66 -79.41 REMARK 500 4 ASN A 19 81.70 -63.12 REMARK 500 4 PRO A 36 99.70 -65.36 REMARK 500 4 ARG A 37 -75.04 -92.47 REMARK 500 5 ALA A 2 87.49 -162.80 REMARK 500 5 ASP A 4 75.61 53.81 REMARK 500 5 ASN A 19 90.18 -66.74 REMARK 500 5 GLU A 31 -68.20 -99.82 REMARK 500 5 ASP A 32 169.28 66.22 REMARK 500 5 ALA A 34 61.77 71.65 REMARK 500 5 LEU A 38 97.16 63.09 REMARK 500 5 HIS A 79 -178.38 61.99 REMARK 500 6 MET A 6 8.57 57.34 REMARK 500 6 GLU A 40 -46.61 73.09 REMARK 500 6 ILE A 59 -70.52 -101.67 REMARK 500 7 LEU A 38 18.03 55.38 REMARK 500 7 GLU A 40 -53.08 72.92 REMARK 500 8 ASP A 4 61.77 -150.67 REMARK 500 8 PRO A 36 84.79 -56.06 REMARK 500 8 LEU A 38 72.11 49.01 REMARK 500 8 HIS A 78 -52.62 70.56 REMARK 500 9 ASP A 4 116.38 70.06 REMARK 500 9 MET A 6 -36.49 68.07 REMARK 500 9 ASP A 18 -154.57 -91.04 REMARK 500 9 GLU A 39 25.87 -75.63 REMARK 500 REMARK 500 THIS ENTRY HAS 121 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ZR215 RELATED DB: TARGETDB REMARK 900 RELATED ID: 16794 RELATED DB: BMRB DBREF 2KVS A 6 72 UNP Q7A1E8 Q7A1E8_STAAW 1 67 SEQADV 2KVS MET A 1 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS ALA A 2 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS GLY A 3 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS ASP A 4 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS PRO A 5 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS LEU A 73 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS GLU A 74 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 75 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 76 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 77 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 78 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 79 UNP Q7A1E8 EXPRESSION TAG SEQADV 2KVS HIS A 80 UNP Q7A1E8 EXPRESSION TAG SEQRES 1 A 80 MET ALA GLY ASP PRO MET THR PHE TYR ASN PHE ILE MET SEQRES 2 A 80 GLY PHE GLN ASN ASP ASN THR PRO PHE GLY ILE LEU ALA SEQRES 3 A 80 GLU HIS VAL SER GLU ASP LYS ALA PHE PRO ARG LEU GLU SEQRES 4 A 80 GLU ARG HIS GLN VAL ILE ARG ALA TYR VAL MET SER ASN SEQRES 5 A 80 TYR THR ASP HIS GLN LEU ILE GLU THR THR ASN ARG ALA SEQRES 6 A 80 ILE SER LEU TYR MET ALA ASN LEU GLU HIS HIS HIS HIS SEQRES 7 A 80 HIS HIS HELIX 1 1 MET A 6 MET A 13 1 8 HELIX 2 2 THR A 20 GLU A 31 1 12 HELIX 3 3 HIS A 42 TYR A 53 1 12 HELIX 4 4 ASP A 55 HIS A 78 1 24 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1