HEADER HYDROLASE 28-MAR-10 2KVV TITLE SOLUTION NMR OF PUTATIVE EXCISIONASE FROM KLEBSIELLA PNEUMONIAE, TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TARGET KPR49 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE EXCISIONASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 272620; SOURCE 4 STRAIN: ATCC 700721 / MGH 78578; SOURCE 5 GENE: KPN78578_13480, KPN_01377; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 21-23C KEYWDS EXCISIONASE, DNA BINDING, WHTH MOTIF, STRUCTURAL GENOMICS, NORTHEAST KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM (NESG), PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,R.XIAO,K.HAMILTON,T.B.ACTON,B.MAO,J.EVERETT,G.T.MONTELIONE, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 14-JUN-23 2KVV 1 REMARK REVDAT 3 05-FEB-20 2KVV 1 REMARK SEQADV REVDAT 2 01-JUN-11 2KVV 1 AUTHOR JRNL REVDAT 1 14-APR-10 2KVV 0 JRNL AUTH G.LIU,R.XIAO,K.HAMILTON,T.B.ACTON,B.MAO,J.EVERETT, JRNL AUTH 2 G.T.MONTELIONE JRNL TITL NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET KPR49 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, AUTOSTRUCTURE 2.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KVV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000101637. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.7 MM [U-100% 13C; U-100% 15N] REMARK 210 KPR49, 95% H2O/5% D2O; 0.8 MM [U- REMARK 210 10% 13C; U-100% 15N] KPR49, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D 1H-13C AROM NOESY; 3D REMARK 210 SIMUTANEOUS 13C-AROMATIC,13C- REMARK 210 ALIPHATIC,15N EDITED 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.0, AUTOSTRUCTURE 2.1, REMARK 210 AUTOASSIGN 2.1, NMRPIPE, XEASY, REMARK 210 TOPSPIN, VNMRJ REMARK 210 METHOD USED : MOLECULAR DYNAMICS, SIMULATED REMARK 210 ANNEALING, DISTANCE GEOMETRY, REMARK 210 TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 39 -70.47 -104.23 REMARK 500 1 PRO A 46 26.04 -70.06 REMARK 500 1 HIS A 73 106.89 -48.38 REMARK 500 1 HIS A 75 90.33 -64.71 REMARK 500 2 PRO A 46 -75.90 -61.55 REMARK 500 2 HIS A 75 102.10 -160.58 REMARK 500 2 HIS A 77 -62.31 -124.54 REMARK 500 3 ILE A 4 86.63 -69.49 REMARK 500 3 ASN A 7 142.15 -173.80 REMARK 500 3 PRO A 46 24.62 -76.04 REMARK 500 3 LYS A 50 73.97 -104.00 REMARK 500 3 GLU A 72 -80.73 59.47 REMARK 500 3 HIS A 73 -71.76 45.79 REMARK 500 3 HIS A 75 92.81 -67.72 REMARK 500 4 ILE A 4 97.22 -66.93 REMARK 500 4 LYS A 50 -35.02 73.47 REMARK 500 4 LEU A 52 21.27 -73.59 REMARK 500 5 VAL A 39 -73.18 -123.89 REMARK 500 5 SER A 47 83.25 -68.39 REMARK 500 5 GLU A 49 40.89 -82.33 REMARK 500 5 HIS A 76 -51.91 -135.14 REMARK 500 6 ASN A 7 -32.94 -171.74 REMARK 500 6 LYS A 50 39.54 -140.73 REMARK 500 7 ILE A 4 68.24 -113.23 REMARK 500 7 VAL A 39 -64.99 -97.76 REMARK 500 7 GLU A 72 76.91 55.22 REMARK 500 7 HIS A 74 89.98 -57.76 REMARK 500 7 HIS A 77 -55.46 -125.05 REMARK 500 8 PRO A 46 22.95 -79.06 REMARK 500 8 SER A 47 -76.75 66.02 REMARK 500 8 LYS A 50 97.07 -60.08 REMARK 500 8 GLU A 72 108.09 -161.17 REMARK 500 8 HIS A 77 -42.54 178.99 REMARK 500 9 ALA A 2 130.90 -176.23 REMARK 500 9 LYS A 50 86.17 -60.74 REMARK 500 9 GLU A 72 -69.56 68.30 REMARK 500 10 PHE A 6 127.88 -173.87 REMARK 500 10 GLU A 72 -35.24 70.42 REMARK 500 11 PHE A 6 103.41 -163.46 REMARK 500 11 ASN A 7 97.58 -167.90 REMARK 500 11 ALA A 34 -32.28 -172.71 REMARK 500 11 GLU A 72 16.57 57.79 REMARK 500 11 HIS A 74 88.39 31.11 REMARK 500 11 HIS A 75 99.14 -68.81 REMARK 500 11 HIS A 77 114.93 -176.36 REMARK 500 12 ASN A 7 43.79 -153.48 REMARK 500 12 SER A 47 -59.70 -136.24 REMARK 500 13 GLU A 72 -71.33 66.28 REMARK 500 13 HIS A 73 99.28 -58.26 REMARK 500 13 HIS A 74 99.86 -47.58 REMARK 500 REMARK 500 THIS ENTRY HAS 65 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16795 RELATED DB: BMRB REMARK 900 RELATED ID: KPR49 RELATED DB: TARGETDB DBREF 2KVV A 1 70 UNP A6T888 A6T888_KLEP7 1 70 SEQADV 2KVV VAL A 18 UNP A6T888 ALA 18 CONFLICT SEQADV 2KVV LEU A 71 UNP A6T888 EXPRESSION TAG SEQADV 2KVV GLU A 72 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 73 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 74 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 75 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 76 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 77 UNP A6T888 EXPRESSION TAG SEQADV 2KVV HIS A 78 UNP A6T888 EXPRESSION TAG SEQRES 1 A 78 MET ALA GLN ILE ILE PHE ASN GLU GLU TRP MET VAL GLU SEQRES 2 A 78 LYS ALA LEU MET VAL ARG THR GLY LEU GLY ALA ARG GLN SEQRES 3 A 78 ILE GLU SER TYR ARG GLN GLY ALA TRP ILE GLU GLY VAL SEQRES 4 A 78 HIS PHE LYS ARG VAL SER PRO SER GLY GLU LYS THR LEU SEQRES 5 A 78 ARG GLY THR THR TRP TYR ASN TYR PRO GLU ILE ASN LYS SEQRES 6 A 78 PHE ILE ARG ASP SER LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 VAL A 12 GLY A 21 1 10 HELIX 2 2 GLY A 23 GLN A 32 1 10 HELIX 3 3 TYR A 60 GLU A 72 1 13 SHEET 1 A 3 TRP A 10 MET A 11 0 SHEET 2 A 3 THR A 55 ASN A 59 -1 O TYR A 58 N MET A 11 SHEET 3 A 3 PHE A 41 VAL A 44 -1 N VAL A 44 O THR A 55 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1