HEADER OXIDOREDUCTASE 30-MAR-10 2KW0 TITLE SOLUTION STRUCTURE OF N-TERMINAL DOMAIN OF CCMH FROM ESCHERICHIA.COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: CCMH PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 19-100; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 511693; SOURCE 4 STRAIN: BL21; SOURCE 5 GENE: B2194, B21_02080, CCMH, JW2182, YEJP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS OXIDOREDUCTASE, CYTOCHROME C MATURATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.HONG,X.ZHENG,H.HU,D.LIN REVDAT 3 26-FEB-20 2KW0 1 SEQADV REVDAT 2 07-NOV-12 2KW0 1 JRNL REVDAT 1 13-JUL-11 2KW0 0 JRNL AUTH X.M.ZHENG,J.HONG,H.Y.LI,D.H.LIN,H.Y.HU JRNL TITL BIOCHEMICAL PROPERTIES AND CATALYTIC DOMAIN STRUCTURE OF THE JRNL TITL 2 CCMH PROTEIN FROM ESCHERICHIA COLI. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1824 1394 2012 JRNL REFN ISSN 0006-3002 JRNL PMID 22789558 JRNL DOI 10.1016/J.BBAPAP.2012.06.017 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000101642. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM PROTEIN-1, 10 % D2O-2, 50 REMARK 210 MM SODIUM PHOSPHATE-3, 100 MM REMARK 210 SODIUM CHLORIDE-4, 5 MM DTT-5, REMARK 210 90% H2O/10% D2O; 1 MM PROTEIN-6, REMARK 210 100 % D2O-7, 50 MM SODIUM REMARK 210 PHOSPHATE-8, 100 MM SODIUM REMARK 210 CHLORIDE-9, 5 MM DTT-10, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HN(CO)CA; 3D HNCO; REMARK 210 3D H(CCO)NH; 3D C(CO)NH; 3D 1H- REMARK 210 15N NOESY; 3D HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 18 REMARK 465 LEU A 100 REMARK 465 GLU A 101 REMARK 465 HIS A 102 REMARK 465 HIS A 103 REMARK 465 HIS A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 20 -88.07 -89.92 REMARK 500 1 ASP A 21 -147.20 -152.41 REMARK 500 1 LEU A 23 80.83 -69.94 REMARK 500 1 ASP A 27 -161.00 -162.27 REMARK 500 1 GLN A 47 63.36 -108.80 REMARK 500 1 SER A 50 -132.68 51.84 REMARK 500 1 ALA A 52 -72.48 -70.42 REMARK 500 1 PRO A 96 -154.40 -76.03 REMARK 500 2 ILE A 20 -83.42 -141.49 REMARK 500 2 ASP A 27 -165.03 -163.16 REMARK 500 2 PRO A 44 72.58 -66.02 REMARK 500 2 PRO A 96 -164.49 -70.75 REMARK 500 3 ILE A 20 -42.00 175.79 REMARK 500 3 ASP A 21 -150.94 -161.81 REMARK 500 3 ASP A 27 -166.54 -172.22 REMARK 500 3 GLN A 47 46.80 -87.26 REMARK 500 3 ASN A 48 -39.64 -166.95 REMARK 500 3 ASN A 49 -75.87 72.83 REMARK 500 3 ASN A 55 -4.47 65.65 REMARK 500 4 ILE A 20 -41.87 -170.10 REMARK 500 4 ASP A 21 -148.79 -145.17 REMARK 500 4 PRO A 96 -79.80 -58.39 REMARK 500 5 PRO A 44 37.41 -70.35 REMARK 500 5 CYS A 46 -43.66 70.63 REMARK 500 5 ASN A 48 146.05 178.08 REMARK 500 5 SER A 50 -112.01 52.79 REMARK 500 5 ALA A 52 -70.72 -79.67 REMARK 500 5 PRO A 96 -168.34 -75.30 REMARK 500 6 ASP A 21 -154.54 -149.78 REMARK 500 6 ASP A 27 -165.32 -161.28 REMARK 500 6 PRO A 44 88.24 -61.34 REMARK 500 6 LYS A 45 117.56 -173.94 REMARK 500 6 GLN A 47 50.15 -97.98 REMARK 500 6 TYR A 87 31.35 -95.95 REMARK 500 7 ASP A 21 -148.19 -160.45 REMARK 500 7 CYS A 46 -57.19 70.01 REMARK 500 7 PRO A 96 -78.94 -51.14 REMARK 500 8 ASP A 21 -164.64 -70.85 REMARK 500 8 PRO A 44 46.09 -71.94 REMARK 500 8 CYS A 46 -60.46 69.95 REMARK 500 8 ASN A 48 90.27 -165.77 REMARK 500 8 SER A 50 144.89 70.55 REMARK 500 8 ASP A 53 55.68 -153.88 REMARK 500 8 PRO A 96 -158.31 -75.86 REMARK 500 9 ILE A 20 -39.19 172.63 REMARK 500 9 ASP A 21 -146.58 -151.72 REMARK 500 9 ASP A 27 -165.55 -170.79 REMARK 500 9 PRO A 44 15.61 -67.47 REMARK 500 9 CYS A 46 -69.39 70.17 REMARK 500 9 ASN A 48 -27.16 178.11 REMARK 500 REMARK 500 THIS ENTRY HAS 111 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16802 RELATED DB: BMRB DBREF 2KW0 A 19 99 UNP C5W6T4 C5W6T4_ECOBB 19 99 SEQADV 2KW0 MET A 18 UNP C5W6T4 INITIATING METHIONINE SEQADV 2KW0 LEU A 100 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 GLU A 101 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 102 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 103 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 104 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 105 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 106 UNP C5W6T4 EXPRESSION TAG SEQADV 2KW0 HIS A 107 UNP C5W6T4 EXPRESSION TAG SEQRES 1 A 90 MET THR ILE ASP VAL LEU GLN PHE LYS ASP GLU ALA GLN SEQRES 2 A 90 GLU GLN GLN PHE ARG GLN LEU THR GLU GLU LEU ARG CYS SEQRES 3 A 90 PRO LYS CYS GLN ASN ASN SER ILE ALA ASP SER ASN SER SEQRES 4 A 90 MET ILE ALA THR ASP LEU ARG GLN LYS VAL TYR GLU LEU SEQRES 5 A 90 MET GLN GLU GLY LYS SER LYS LYS GLU ILE VAL ASP TYR SEQRES 6 A 90 MET VAL ALA ARG TYR GLY ASN PHE VAL THR TYR ASP PRO SEQRES 7 A 90 PRO LEU THR PRO LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 ASP A 27 GLU A 40 1 14 HELIX 2 2 SER A 56 GLY A 73 1 18 HELIX 3 3 SER A 75 GLY A 88 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1