HEADER IMMUNE SYSTEM 05-APR-10 2KWD TITLE SUPRAMOLECULAR PROTEIN STRUCTURE DETERMINATION BY SITE-SPECIFIC LONG- TITLE 2 RANGE INTERMOLECULAR SOLID STATE NMR SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN G; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: IGG-BINDING PROTEIN G; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS SP. 'GROUP G'; SOURCE 3 ORGANISM_TAXID: 1320; SOURCE 4 GENE: SPG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS GB1, CRYSTAL PACKING, SOLID-STATE, QUATERNARY STRUCTURE, TEDOR, KEYWDS 2 IMMUNE SYSTEM EXPDTA SOLID-STATE NMR NUMMDL 10 AUTHOR A.J.NIEUWKOOP,C.M.RIENSTRA REVDAT 2 16-JUN-10 2KWD 1 JRNL REVDAT 1 02-JUN-10 2KWD 0 JRNL AUTH A.J.NIEUWKOOP,C.M.RIENSTRA JRNL TITL SUPRAMOLECULAR PROTEIN STRUCTURE DETERMINATION BY JRNL TITL 2 SITE-SPECIFIC LONG-RANGE INTERMOLECULAR SOLID STATE NMR JRNL TITL 3 SPECTROSCOPY. JRNL REF J.AM.CHEM.SOC. V. 132 7570 2010 JRNL REFN ISSN 0002-7863 JRNL PMID 20465251 JRNL DOI 10.1021/JA100992Y REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KWD COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-10. REMARK 100 THE RCSB ID CODE IS RCSB101655. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 273 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20 MG [U-1,3-13C-GLYCEROL; U- REMARK 210 100% 15N] GB1-1, SOLID; 50 % [U- REMARK 210 1,3-13C-GLYCEROL] GB1-2, 50 % [U- REMARK 210 99% 15N] GB1-3, SOLID; 20 MG [U- REMARK 210 2-13C-GLYCEROL; U-100% 15N] GB1- REMARK 210 4, SOLID REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 15N-13C TEDOR REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INFINITY PLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, X-PLOR_NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 600 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: 11.111 KHZ MAS REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY B 9 HZ1 LYS B 13 1.08 REMARK 500 H GLY A 9 HZ1 LYS A 13 1.14 REMARK 500 H GLY E 9 HZ1 LYS E 13 1.16 REMARK 500 H GLY D 9 HZ1 LYS D 13 1.16 REMARK 500 H GLY C 9 HZ1 LYS C 13 1.16 REMARK 500 HH TYR B 33 HD22 ASN B 37 1.25 REMARK 500 HH TYR C 33 HD22 ASN C 37 1.26 REMARK 500 HH TYR E 33 HD22 ASN E 37 1.26 REMARK 500 HH TYR A 33 HD22 ASN A 37 1.27 REMARK 500 HZ1 LYS A 31 H1 MET D 1 1.27 REMARK 500 H1 MET A 1 HZ1 LYS E 31 1.27 REMARK 500 HH TYR D 33 HD22 ASN D 37 1.30 REMARK 500 H2 MET A 1 HZ2 LYS E 31 1.53 REMARK 500 O GLU E 27 H LYS E 31 1.56 REMARK 500 O GLU D 27 H LYS D 31 1.57 REMARK 500 H LEU A 5 O THR A 16 1.57 REMARK 500 O GLU B 27 H LYS B 31 1.57 REMARK 500 H ASP A 46 O THR A 51 1.57 REMARK 500 O GLU A 27 H LYS A 31 1.57 REMARK 500 OD1 ASP C 46 H THR C 49 1.57 REMARK 500 O GLU C 27 H LYS C 31 1.58 REMARK 500 H LEU C 5 O THR C 16 1.59 REMARK 500 H LEU E 5 O THR E 16 1.59 REMARK 500 H LEU B 5 O THR B 16 1.60 REMARK 500 H LEU D 5 O THR D 16 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15156 RELATED DB: BMRB REMARK 900 GB1 CHEMICAL SHIFTS REMARK 900 RELATED ID: 2KQ4 RELATED DB: PDB REMARK 900 MONOMER STRUCTURE DBREF 2KWD A 3 56 UNP P19909 SPG2_STRSG 304 357 DBREF 2KWD B 3 56 UNP P19909 SPG2_STRSG 304 357 DBREF 2KWD C 3 56 UNP P19909 SPG2_STRSG 304 357 DBREF 2KWD D 3 56 UNP P19909 SPG2_STRSG 304 357 DBREF 2KWD E 3 56 UNP P19909 SPG2_STRSG 304 357 SEQADV 2KWD MET A 1 UNP P19909 EXPRESSION TAG SEQADV 2KWD GLN A 2 UNP P19909 EXPRESSION TAG SEQADV 2KWD MET B 1 UNP P19909 EXPRESSION TAG SEQADV 2KWD GLN B 2 UNP P19909 EXPRESSION TAG SEQADV 2KWD MET C 1 UNP P19909 EXPRESSION TAG SEQADV 2KWD GLN C 2 UNP P19909 EXPRESSION TAG SEQADV 2KWD MET D 1 UNP P19909 EXPRESSION TAG SEQADV 2KWD GLN D 2 UNP P19909 EXPRESSION TAG SEQADV 2KWD MET E 1 UNP P19909 EXPRESSION TAG SEQADV 2KWD GLN E 2 UNP P19909 EXPRESSION TAG SEQRES 1 A 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 A 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 A 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 A 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 A 56 THR VAL THR GLU SEQRES 1 B 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 B 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 B 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 B 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 B 56 THR VAL THR GLU SEQRES 1 C 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 C 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 C 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 C 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 C 56 THR VAL THR GLU SEQRES 1 D 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 D 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 D 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 D 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 D 56 THR VAL THR GLU SEQRES 1 E 56 MET GLN TYR LYS LEU ILE LEU ASN GLY LYS THR LEU LYS SEQRES 2 E 56 GLY GLU THR THR THR GLU ALA VAL ASP ALA ALA THR ALA SEQRES 3 E 56 GLU LYS VAL PHE LYS GLN TYR ALA ASN ASP ASN GLY VAL SEQRES 4 E 56 ASP GLY GLU TRP THR TYR ASP ASP ALA THR LYS THR PHE SEQRES 5 E 56 THR VAL THR GLU HELIX 1 1 ASP A 22 GLY A 38 1 17 HELIX 2 2 ASP B 22 GLY B 38 1 17 HELIX 3 3 ASP C 22 GLY C 38 1 17 HELIX 4 4 ASP D 22 GLY D 38 1 17 HELIX 5 5 ASP E 22 GLY E 38 1 17 SHEET 1 A 4 LYS A 13 GLU A 19 0 SHEET 2 A 4 GLN A 2 ASN A 8 -1 N LEU A 5 O THR A 16 SHEET 3 A 4 THR A 51 THR A 55 1 O PHE A 52 N LYS A 4 SHEET 4 A 4 GLU A 42 ASP A 46 -1 N ASP A 46 O THR A 51 SHEET 1 B 4 LYS B 13 GLU B 19 0 SHEET 2 B 4 GLN B 2 ASN B 8 -1 N LEU B 5 O THR B 16 SHEET 3 B 4 THR B 51 THR B 55 1 O PHE B 52 N LYS B 4 SHEET 4 B 4 GLU B 42 ASP B 46 -1 N GLU B 42 O THR B 55 SHEET 1 C 4 LYS C 13 GLU C 19 0 SHEET 2 C 4 GLN C 2 ASN C 8 -1 N LEU C 5 O THR C 16 SHEET 3 C 4 THR C 51 THR C 55 1 O PHE C 52 N LYS C 4 SHEET 4 C 4 GLU C 42 ASP C 46 -1 N ASP C 46 O THR C 51 SHEET 1 D 4 LYS D 13 GLU D 19 0 SHEET 2 D 4 GLN D 2 ASN D 8 -1 N LEU D 5 O THR D 16 SHEET 3 D 4 THR D 51 THR D 55 1 O PHE D 52 N LYS D 4 SHEET 4 D 4 GLU D 42 ASP D 46 -1 N GLU D 42 O THR D 55 SHEET 1 E 4 LYS E 13 GLU E 19 0 SHEET 2 E 4 GLN E 2 ASN E 8 -1 N LEU E 5 O THR E 16 SHEET 3 E 4 THR E 51 THR E 55 1 O PHE E 52 N LYS E 4 SHEET 4 E 4 GLU E 42 ASP E 46 -1 N GLU E 42 O THR E 55 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1