HEADER TRANSFERASE 07-JUN-10 2KYR TITLE SOLUTION STRUCTURE OF ENZYME IIB SUBUNIT OF PTS SYSTEM FROM TITLE 2 ESCHERICHIA COLI K12. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TITLE 3 ER315/ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TARGET EC0544 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-LIKE PHOSPHOTRANSFERASE ENZYME IIB COMPONENT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PTS SYSTEM FRUCTOSE-LIKE EIIB COMPONENT 1; COMPND 5 EC: 2.7.1.69; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: FRYB, YPDH, B2387, JW5389; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET11 KEYWDS FRUCTOSE-LIKE PHOSPHOTRANSFERASE ENZYME IIB COMPONENT 1, ALPHA-BETA KEYWDS 2 PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, ONTARIO CENTRE FOR KEYWDS 4 STRUCTURAL PROTEOMICS, OCSP, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.WU,A.YEE,A.GUTMANAS,A.SEMEST,G.T.MONTELIONE,C.H.ARROWSMITH, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG),ONTARIO CENTRE FOR AUTHOR 3 STRUCTURAL PROTEOMICS (OCSP) REVDAT 4 15-MAY-24 2KYR 1 REMARK REVDAT 3 14-JUN-23 2KYR 1 REMARK REVDAT 2 05-FEB-20 2KYR 1 REMARK SEQADV REVDAT 1 16-JUN-10 2KYR 0 JRNL AUTH B.WU,A.YEE,A.GUTMANAS,A.SEMEST,C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF ENZYME IIB SUBUNIT OF PTS SYSTEM FROM JRNL TITL 2 ESCHERICHIA COLI K12, NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET ER315/ONTARIO CENTER FOR STRUCTURAL JRNL TITL 4 PROTEOMICS TARGET EC0544 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000101741. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 EC0544-1, 10 MM [U-100% 2H] TRIS- REMARK 210 2, 300 MM SODIUM CHLORIDE-3, 10 REMARK 210 UM ZINC SULPHATE-4, 10 MM [U-100% REMARK 210 2H] DTT-5, 10 MM BENZAMIDINE-6, REMARK 210 1 % INHIBITOR COCKTAIL-7, 90% REMARK 210 H2O/10% D2O; 0.5 MM [U-7% 13C; U- REMARK 210 100% 15N] EC0544-8, 10 MM [U-100% REMARK 210 2H] TRIS-9, 300 MM SODIUM REMARK 210 CHLORIDE-10, 10 UM ZINC SULPHATE- REMARK 210 11, 10 MM [U-100% 2H] DTT-12, 10 REMARK 210 MM BENZAMIDINE-13, 1 % INHIBITOR REMARK 210 COCKTAIL-14, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HNCA; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-13C REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MDDGUI 1.0, SPARKY 3.95, FAWN REMARK 210 1.0, CYANA 2.1, AUTOSTRUCTURE, REMARK 210 PSVS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB3 ASP A 71 HH11 ARG A 74 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 58 100.49 -53.15 REMARK 500 2 SER A 2 99.69 -67.29 REMARK 500 2 ASN A 48 -54.21 79.82 REMARK 500 2 ARG A 49 144.63 65.32 REMARK 500 3 ASN A 48 -49.94 79.10 REMARK 500 3 ARG A 49 122.82 66.86 REMARK 500 4 ALA A 58 99.81 -54.93 REMARK 500 5 ALA A 58 99.65 -56.93 REMARK 500 5 ASP A 79 99.58 -68.65 REMARK 500 6 LYS A 3 -174.42 -66.18 REMARK 500 7 ALA A 58 102.60 -51.92 REMARK 500 9 ALA A 58 96.74 -63.35 REMARK 500 10 MET A 13 -62.36 -99.40 REMARK 500 11 SER A 2 98.67 -65.75 REMARK 500 11 ALA A 58 102.56 -55.73 REMARK 500 13 SER A 2 99.60 -64.08 REMARK 500 13 ALA A 58 99.37 -52.75 REMARK 500 15 MET A 13 -71.76 -83.46 REMARK 500 16 ALA A 58 99.04 -56.19 REMARK 500 17 ASN A 48 -51.92 79.06 REMARK 500 17 ARG A 49 121.63 63.57 REMARK 500 17 ALA A 58 99.00 -61.90 REMARK 500 18 ASN A 48 -64.87 74.39 REMARK 500 18 ARG A 49 129.19 63.73 REMARK 500 18 ALA A 58 101.88 -56.57 REMARK 500 20 LYS A 3 -169.25 -79.86 REMARK 500 20 ALA A 58 108.01 -58.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ER315 RELATED DB: TARGETDB REMARK 900 RELATED ID: 16979 RELATED DB: BMRB DBREF 2KYR A 1 108 UNP P69808 PTFB1_ECOLI 1 108 SEQADV 2KYR GLN A -2 UNP P69808 EXPRESSION TAG SEQADV 2KYR GLY A -1 UNP P69808 EXPRESSION TAG SEQADV 2KYR HIS A 0 UNP P69808 EXPRESSION TAG SEQRES 1 A 111 GLN GLY HIS MET SER LYS LYS LEU ILE ALA LEU CYS ALA SEQRES 2 A 111 CYS PRO MET GLY LEU ALA HIS THR PHE MET ALA ALA GLN SEQRES 3 A 111 ALA LEU GLU GLU ALA ALA VAL GLU ALA GLY TYR GLU VAL SEQRES 4 A 111 LYS ILE GLU THR GLN GLY ALA ASP GLY ILE GLN ASN ARG SEQRES 5 A 111 LEU THR ALA GLN ASP ILE ALA GLU ALA THR ILE ILE ILE SEQRES 6 A 111 HIS SER VAL ALA VAL THR PRO GLU ASP ASN GLU ARG PHE SEQRES 7 A 111 GLU SER ARG ASP VAL TYR GLU ILE THR LEU GLN ASP ALA SEQRES 8 A 111 ILE LYS ASN ALA ALA GLY ILE ILE LYS GLU ILE GLU GLU SEQRES 9 A 111 MET ILE ALA SER GLU GLN GLN HELIX 1 1 GLY A 14 ALA A 32 1 19 HELIX 2 2 THR A 51 ALA A 58 1 8 HELIX 3 3 ASP A 71 GLU A 76 5 6 HELIX 4 4 GLN A 86 ASN A 91 1 6 HELIX 5 5 ASN A 91 GLN A 108 1 18 SHEET 1 A 5 GLY A 45 GLN A 47 0 SHEET 2 A 5 GLU A 35 GLY A 42 -1 N THR A 40 O GLN A 47 SHEET 3 A 5 LYS A 4 CYS A 11 1 N CYS A 9 O GLU A 39 SHEET 4 A 5 ILE A 60 VAL A 65 1 O ILE A 62 N LEU A 8 SHEET 5 A 5 VAL A 80 THR A 84 1 O TYR A 81 N ILE A 61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1