HEADER PROTON TRANSPORT 14-JUN-10 2KZ9 TITLE STRUCTURE OF E1-69 OF YEAST V-ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: V-TYPE PROTON ATPASE SUBUNIT E; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-69; COMPND 5 SYNONYM: V-ATPASE SUBUNIT E, VACUOLAR PROTON PUMP SUBUNIT E, V-ATPASE COMPND 6 27 KDA SUBUNIT; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: O6241, VAT5, VMA4, YOR332W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET9D KEYWDS V-ATPASE, SUBUNIT E, PROTON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR N.SANKARANARAYANAN,G.GRUBER REVDAT 3 14-JUN-23 2KZ9 1 REMARK REVDAT 2 26-FEB-20 2KZ9 1 REMARK REVDAT 1 16-FEB-11 2KZ9 0 JRNL AUTH N.SANKARANARAYANAN,Y.R.THAKER,G.GRUBER JRNL TITL NMR SOLUTION STRUCTURE OF SUBUNIT E (E1-69) OF THE JRNL TITL 2 SACCHAROMYCES CEREVISIAE V1VO ATPASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KZ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000101759. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN-1, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; 2D 1H-15N HSQC; 3D HNCO; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HCACO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MOLMOL, SPARKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 9 68.42 -150.90 REMARK 500 1 PRO A 10 -171.50 -69.77 REMARK 500 2 SER A 3 -35.05 -179.47 REMARK 500 2 LEU A 8 34.31 -179.37 REMARK 500 2 PRO A 10 -171.59 -69.73 REMARK 500 3 SER A 3 -74.13 -56.51 REMARK 500 3 THR A 6 24.99 -160.79 REMARK 500 3 THR A 9 72.12 -114.48 REMARK 500 4 SER A 3 -72.12 -86.87 REMARK 500 4 ALA A 4 -70.67 71.92 REMARK 500 4 THR A 6 -68.15 -161.50 REMARK 500 4 LEU A 8 61.96 -177.15 REMARK 500 4 THR A 9 73.61 -116.05 REMARK 500 4 PRO A 10 -171.13 -69.72 REMARK 500 5 ALA A 2 -71.47 -177.99 REMARK 500 5 SER A 3 -74.17 -68.06 REMARK 500 5 PRO A 10 -175.55 -69.69 REMARK 500 6 ALA A 2 -70.49 71.93 REMARK 500 6 SER A 3 47.18 -143.71 REMARK 500 6 ALA A 7 75.27 63.76 REMARK 500 6 LEU A 8 -74.44 -58.34 REMARK 500 7 ALA A 2 -39.86 -175.07 REMARK 500 7 LEU A 8 -74.46 -56.48 REMARK 500 7 THR A 9 73.96 46.71 REMARK 500 7 PRO A 10 78.94 -69.78 REMARK 500 8 ALA A 7 -75.53 -174.58 REMARK 500 8 PRO A 10 -171.03 -69.72 REMARK 500 9 ALA A 2 27.61 -151.54 REMARK 500 9 ILE A 5 -72.16 -63.23 REMARK 500 9 THR A 6 -61.52 -146.13 REMARK 500 9 ALA A 7 -70.77 -172.30 REMARK 500 9 PRO A 10 -171.95 -69.71 REMARK 500 10 ALA A 2 47.74 -175.40 REMARK 500 10 ALA A 7 -43.41 -134.72 REMARK 500 10 PRO A 10 -172.36 -69.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17000 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE S2A IS MUTAGENESIS ACCORDING TO REF 13 OF DATABASE REMARK 999 UNIPROTKB/SWISS-PROT P22203 (VATE_YEAST). DBREF 2KZ9 A 1 69 UNP P22203 VATE_YEAST 1 69 SEQADV 2KZ9 ALA A 2 UNP P22203 SER 2 SEE REMARK 999 SEQRES 1 A 69 MET ALA SER ALA ILE THR ALA LEU THR PRO ASN GLN VAL SEQRES 2 A 69 ASN ASP GLU LEU ASN LYS MET GLN ALA PHE ILE ARG LYS SEQRES 3 A 69 GLU ALA GLU GLU LYS ALA LYS GLU ILE GLN LEU LYS ALA SEQRES 4 A 69 ASP GLN GLU TYR GLU ILE GLU LYS THR ASN ILE VAL ARG SEQRES 5 A 69 ASN GLU THR ASN ASN ILE ASP GLY ASN PHE LYS SER LYS SEQRES 6 A 69 LEU LYS LYS ALA HELIX 1 1 PRO A 10 ALA A 69 1 60 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1