HEADER TRANSCRIPTION 06-JUL-10 2L0I TITLE SOLUTION STRUCTURE OF RTT103 CTD-INTERACTING DOMAIN BOUND TO A SER2 TITLE 2 PHOSPHORYLATED CTD PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR OF TY1 TRANSPOSITION PROTEIN 103; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-131; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA-DIRECTED RNA POLYMERASE; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: C-TERMINAL DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: RTT103, YDR289C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28B; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 12 ORGANISM_COMMON: YEAST; SOURCE 13 ORGANISM_TAXID: 4932 KEYWDS TRANSCRIPTION, 3' END PROCESSING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR B.M.LUNDE,S.L.REICHOW,M.KIM,H.SUH,T.C.LEEPER,F.YANG,H.MUTSCHLER, AUTHOR 2 S.BURATOWSKI,A.MEINHART,G.VARANI REVDAT 3 20-NOV-24 2L0I 1 SEQADV LINK REVDAT 2 20-OCT-10 2L0I 1 JRNL REVDAT 1 08-SEP-10 2L0I 0 JRNL AUTH B.M.LUNDE,S.L.REICHOW,M.KIM,H.SUH,T.C.LEEPER,F.YANG, JRNL AUTH 2 H.MUTSCHLER,S.BURATOWSKI,A.MEINHART,G.VARANI JRNL TITL COOPERATIVE INTERACTION OF TRANSCRIPTION TERMINATION FACTORS JRNL TITL 2 WITH THE RNA POLYMERASE II C-TERMINAL DOMAIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 1195 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 20818393 JRNL DOI 10.1038/NSMB.1893 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2, CNS 1.2 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), HADDOCK -BONVIN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L0I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000101802. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0.120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] REMARK 210 RTT103-1, 10 MM [U-99% 2H] TRIS- REMARK 210 2, 120 MM SODIUM CHLORIDE-3, 1.5 REMARK 210 MM CTD-4, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D 1H-13C NOESY; 3D 1H-15N NOESY; REMARK 210 3D HCCH-TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 TYR B 201 REMARK 465 SER B 202 REMARK 465 PRO B 203 REMARK 465 THR B 204 REMARK 465 SER B 205 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1P SEP B 209 HG1 THR B 211 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER B 207 123.75 72.61 REMARK 500 2 ASP A 17 35.57 -80.83 REMARK 500 2 GLN A 32 48.74 -98.10 REMARK 500 2 SER B 207 80.52 59.33 REMARK 500 3 GLN A 32 36.86 -97.24 REMARK 500 3 GLU A 136 68.62 -102.78 REMARK 500 3 SER B 207 99.94 67.40 REMARK 500 4 ASP A 17 41.90 -84.38 REMARK 500 4 SER B 207 102.88 63.38 REMARK 500 5 SER B 207 98.02 65.05 REMARK 500 6 ASP A 17 40.53 -80.19 REMARK 500 6 GLN A 32 48.12 -103.08 REMARK 500 6 PRO A 99 -77.10 -52.55 REMARK 500 6 ARG A 100 -53.94 -155.80 REMARK 500 6 SER B 207 82.88 59.59 REMARK 500 7 GLU A 6 50.40 36.12 REMARK 500 7 SER B 207 81.10 59.64 REMARK 500 8 ASP A 17 29.31 -79.82 REMARK 500 8 GLN A 32 48.42 -97.93 REMARK 500 8 SER B 207 83.26 59.50 REMARK 500 9 GLN A 32 56.77 -95.28 REMARK 500 9 SER B 207 74.58 70.00 REMARK 500 10 GLU A 6 33.74 -88.91 REMARK 500 10 GLN A 32 59.80 -105.19 REMARK 500 10 PRO A 99 -177.41 -64.35 REMARK 500 10 ASN A 117 71.23 51.51 REMARK 500 10 SER B 207 93.68 63.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KM4 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF RTT103 CTD-INTERACTING DOMAIN DBREF 2L0I A 1 131 UNP Q05543 RT103_YEAST 1 131 DBREF 2L0I B 201 214 PDB 2L0I 2L0I 201 214 SEQADV 2L0I ALA A 2 UNP Q05543 PRO 2 CLONING ARTIFACT SEQADV 2L0I ALA A 132 UNP Q05543 EXPRESSION TAG SEQADV 2L0I ALA A 133 UNP Q05543 EXPRESSION TAG SEQADV 2L0I ALA A 134 UNP Q05543 EXPRESSION TAG SEQADV 2L0I LEU A 135 UNP Q05543 EXPRESSION TAG SEQADV 2L0I GLU A 136 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 137 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 138 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 139 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 140 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 141 UNP Q05543 EXPRESSION TAG SEQADV 2L0I HIS A 142 UNP Q05543 EXPRESSION TAG SEQRES 1 A 142 MET ALA PHE SER SER GLU GLN PHE THR THR LYS LEU ASN SEQRES 2 A 142 THR LEU GLU ASP SER GLN GLU SER ILE SER SER ALA SER SEQRES 3 A 142 LYS TRP LEU LEU LEU GLN TYR ARG ASP ALA PRO LYS VAL SEQRES 4 A 142 ALA GLU MET TRP LYS GLU TYR MET LEU ARG PRO SER VAL SEQRES 5 A 142 ASN THR ARG ARG LYS LEU LEU GLY LEU TYR LEU MET ASN SEQRES 6 A 142 HIS VAL VAL GLN GLN ALA LYS GLY GLN LYS ILE ILE GLN SEQRES 7 A 142 PHE GLN ASP SER PHE GLY LYS VAL ALA ALA GLU VAL LEU SEQRES 8 A 142 GLY ARG ILE ASN GLN GLU PHE PRO ARG ASP LEU LYS LYS SEQRES 9 A 142 LYS LEU SER ARG VAL VAL ASN ILE LEU LYS GLU ARG ASN SEQRES 10 A 142 ILE PHE SER LYS GLN VAL VAL ASN ASP ILE GLU ARG SER SEQRES 11 A 142 LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 14 TYR SER PRO THR SER PRO SER TYR SEP PRO THR SER PRO SEQRES 2 B 14 SER MODRES 2L0I SEP B 209 SER PHOSPHOSERINE HET SEP B 209 14 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 2 SEP C3 H8 N O6 P HELIX 1 1 GLU A 6 ASN A 13 1 8 HELIX 2 2 SER A 18 LEU A 31 1 14 HELIX 3 3 GLN A 32 ARG A 34 5 3 HELIX 4 4 ASP A 35 ARG A 49 1 15 HELIX 5 5 ASN A 53 LYS A 75 1 23 HELIX 6 6 ILE A 76 ASN A 95 1 20 HELIX 7 7 PRO A 99 ARG A 116 1 18 HELIX 8 8 SER A 120 ALA A 134 1 15 HELIX 9 9 LEU A 135 HIS A 137 5 3 LINK C TYR B 208 N SEP B 209 1555 1555 1.33 LINK C SEP B 209 N PRO B 210 1555 1555 1.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1