HEADER HYDROLASE 17-AUG-10 2L2D TITLE SOLUTION NMR STRUCTURE OF HUMAN UBA-LIKE DOMAIN OF OTUD7A_11_83, NESG TITLE 2 TARGET HT6304A/OCSP TARGET OTUD7A_11_83/SGC-TORONTO COMPND MOL_ID: 1; COMPND 2 MOLECULE: OTU DOMAIN-CONTAINING PROTEIN 7A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ZINC FINGER PROTEIN CEZANNE 2; COMPND 5 EC: 3.4.19.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OTUD7A, C15ORF16, CEZANNE2, OTUD7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28-MHL KEYWDS UBA FOLD, STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, ONTARIO KEYWDS 3 CENTRE FOR STRUCTURAL PROTEOMICS, OCSP, SGC, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.WU,A.YEE,A.LEMAK,A.GUTMANAS,S.HOULISTON,A.SEMESI,S.DHE-PAGANON, AUTHOR 2 G.T.MONTELIONE,C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG),ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS (OCSP), AUTHOR 4 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 5 14-JUN-23 2L2D 1 REMARK REVDAT 4 05-FEB-20 2L2D 1 REMARK REVDAT 3 22-FEB-12 2L2D 1 VERSN KEYWDS REVDAT 2 06-OCT-10 2L2D 1 TITLE REVDAT 1 01-SEP-10 2L2D 0 JRNL AUTH B.WU,A.ASINAS,A.YEE,R.DOHERTY,A.LEMAK,A.GUTMANAS, JRNL AUTH 2 S.HOULISTON,A.SEMESI,C.H.ARROWSMITH,G.T.MONTELIONE, JRNL AUTH 3 S.DHE-PAGANON JRNL TITL THE AMINO-TERMINAL UBA DOMAIN OF OTUD7A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L2D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000101869. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 OTUD7A_11_83, 10 MM [U-100% 2H] REMARK 210 TRIS, 300 MM SODIUM CHLORIDE, 10 REMARK 210 UM ZINC SULPHATE, 10 MM [U-100% REMARK 210 2H] DTT, 10 MM BENZAMIDINE, 1 X REMARK 210 INHIBITOR COCKTAIL, 90% H2O/10% REMARK 210 D2O; 0.5 MM [U-10% 13C; U-99% REMARK 210 15N] OTUD7A_11_83, 10 MM [U-100% REMARK 210 2H] TRIS, 300 MM SODIUM CHLORIDE, REMARK 210 10 UM ZINC SULPHATE, 10 MM [U- REMARK 210 100% 2H] DTT, 10 MM BENZAMIDINE, REMARK 210 1 X INHIBITOR COCKTAIL, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HNCA; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-13C REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MDDGUI 1.0, SPARKY 3.95, FMCGUI REMARK 210 2.4, CYANA 2.1, AUTOSTRUCTURE, REMARK 210 PSVS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 15 -70.51 -85.99 REMARK 500 1 ALA A 16 -62.87 -150.60 REMARK 500 1 ALA A 17 91.89 61.39 REMARK 500 1 LEU A 18 94.89 -68.76 REMARK 500 1 MET A 23 -55.52 -174.67 REMARK 500 1 THR A 24 -52.77 -148.88 REMARK 500 1 LEU A 25 128.11 -175.57 REMARK 500 1 VAL A 69 82.60 60.02 REMARK 500 1 GLU A 80 89.12 -65.79 REMARK 500 2 GLU A 13 94.31 58.37 REMARK 500 2 TRP A 15 59.42 -109.02 REMARK 500 2 ALA A 17 88.49 59.65 REMARK 500 2 LEU A 19 41.53 -85.77 REMARK 500 2 HIS A 20 -103.09 -172.64 REMARK 500 2 ASP A 21 161.94 177.80 REMARK 500 2 THR A 24 -35.78 -153.92 REMARK 500 2 LEU A 25 137.84 -171.00 REMARK 500 2 TRP A 54 16.24 54.74 REMARK 500 2 VAL A 69 72.68 45.95 REMARK 500 2 VAL A 77 96.16 -66.86 REMARK 500 2 ASN A 79 93.18 62.98 REMARK 500 2 ARG A 82 15.78 -161.72 REMARK 500 3 ALA A 12 -73.67 -144.60 REMARK 500 3 GLU A 13 15.87 54.58 REMARK 500 3 MET A 23 -80.17 -153.14 REMARK 500 3 THR A 24 -37.30 -143.51 REMARK 500 3 LEU A 25 102.37 -166.09 REMARK 500 3 ASN A 53 32.19 70.41 REMARK 500 3 VAL A 69 85.77 55.39 REMARK 500 3 HIS A 70 -59.52 -120.46 REMARK 500 3 PRO A 75 80.19 -66.57 REMARK 500 3 ARG A 82 98.10 68.09 REMARK 500 4 TRP A 15 90.51 -64.74 REMARK 500 4 ALA A 16 -41.37 -173.83 REMARK 500 4 LEU A 18 162.59 71.24 REMARK 500 4 ASP A 21 172.51 68.84 REMARK 500 4 MET A 23 67.28 -106.04 REMARK 500 4 VAL A 69 102.34 46.42 REMARK 500 4 THR A 71 -45.23 -143.22 REMARK 500 4 ALA A 72 -172.25 59.56 REMARK 500 4 ARG A 82 -30.45 -162.95 REMARK 500 5 GLU A 13 93.00 62.71 REMARK 500 5 MET A 23 -87.35 -132.82 REMARK 500 5 THR A 24 -40.38 -141.61 REMARK 500 5 VAL A 69 89.90 51.59 REMARK 500 5 ASN A 73 139.15 -171.96 REMARK 500 6 ALA A 12 134.65 66.90 REMARK 500 6 TRP A 15 -71.72 -72.51 REMARK 500 6 ALA A 16 -68.37 -177.42 REMARK 500 6 ALA A 17 104.76 -160.79 REMARK 500 REMARK 500 THIS ENTRY HAS 172 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17132 RELATED DB: BMRB REMARK 900 RELATED ID: HT6304A RELATED DB: TARGETDB DBREF 2L2D A 11 83 UNP Q8TE49 OTU7A_HUMAN 11 83 SEQRES 1 A 73 SER ALA GLU CYS TRP ALA ALA LEU LEU HIS ASP PRO MET SEQRES 2 A 73 THR LEU ASP MET ASP ALA VAL LEU SER ASP PHE VAL ARG SEQRES 3 A 73 SER THR GLY ALA GLU PRO GLY LEU ALA ARG ASP LEU LEU SEQRES 4 A 73 GLU GLY LYS ASN TRP ASP LEU THR ALA ALA LEU SER ASP SEQRES 5 A 73 TYR GLU GLN LEU ARG GLN VAL HIS THR ALA ASN LEU PRO SEQRES 6 A 73 HIS VAL PHE ASN GLU GLY ARG GLY HELIX 1 1 ASP A 26 GLY A 39 1 14 HELIX 2 2 GLU A 41 LYS A 52 1 12 HELIX 3 3 ASP A 55 VAL A 69 1 15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1