HEADER RNA BINDING PROTEIN, PLANT PROTEIN 22-AUG-10 2L2M TITLE SOLUTION STRUCTURE OF THE SECOND DSRBD OF HYL1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPONASTIC LEAVE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 97-170; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT1G09700, F21M12.9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-TEV KEYWDS MIRNA, DSRBD, RNA BINDING PROTEIN, PLANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR R.M.RASIA,J.L.MATEOS,N.G.BOLOGNA,P.BURDISSO,L.IMBERT,J.F.PALATNIK, AUTHOR 2 J.BOISBOUVIER REVDAT 1 29-SEP-10 2L2M 0 JRNL AUTH R.M.RASIA,J.MATEOS,N.G.BOLOGNA,P.BURDISSO,L.IMBERT, JRNL AUTH 2 J.F.PALATNIK,J.BOISBOUVIER JRNL TITL STRUCTURE AND RNA INTERACTIONS OF THE PLANT MICRORNA JRNL TITL 2 PROCESSING-ASSOCIATED PROTEIN HYL1. JRNL REF BIOCHEMISTRY V. 49 8237 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20735118 JRNL DOI 10.1021/BI100672X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L2M COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-10. REMARK 100 THE RCSB ID CODE IS RCSB101878. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-100% 13C; U-100% 15N] REMARK 210 HYL1-2, 10 MM DTT, 100 MM SODIUM REMARK 210 PHOSPHATE, 50 MM SODIUM CHLORIDE, REMARK 210 0.05 % SODIUM AZIDE, 90% H2O/10% REMARK 210 D2O; 0.8 MM [U-100% 13C; U-100% REMARK 210 15N] HYL1-2, 10 MM DTT, 100 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 0.05 % SODIUM AZIDE, 5 REMARK 210 % C12E5, 0.2 % HEXANOL, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCACB; 3D HN(CO)CA; 3D REMARK 210 HN(COCA)CB; 3D HN(CA)CO; 3D HNCO REMARK 210 JCACO; 3D HNCO JNH; 3D HNCOCA REMARK 210 JCAHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DIRECTDRIVE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW REMARK 210 METHOD USED : ROSETTA FULL ATOM RELAXATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A 94 REMARK 465 HIS A 95 REMARK 465 MET A 96 REMARK 465 HIS A 97 REMARK 465 GLU A 98 REMARK 465 THR A 99 REMARK 465 GLY A 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 4 ALA A 116 159.72 -49.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2L2N RELATED DB: PDB DBREF 2L2M A 97 170 UNP O04492 O04492_ARATH 97 170 SEQADV 2L2M GLY A 94 UNP O04492 EXPRESSION TAG SEQADV 2L2M HIS A 95 UNP O04492 EXPRESSION TAG SEQADV 2L2M MET A 96 UNP O04492 EXPRESSION TAG SEQRES 1 A 77 GLY HIS MET HIS GLU THR GLY LEU CYS LYS ASN LEU LEU SEQRES 2 A 77 GLN GLU TYR ALA GLN LYS MET ASN TYR ALA ILE PRO LEU SEQRES 3 A 77 TYR GLN CYS GLN LYS VAL GLU THR LEU GLY ARG VAL THR SEQRES 4 A 77 GLN PHE THR CYS THR VAL GLU ILE GLY GLY ILE LYS TYR SEQRES 5 A 77 THR GLY ALA ALA THR ARG THR LYS LYS ASP ALA GLU ILE SEQRES 6 A 77 SER ALA GLY ARG THR ALA LEU LEU ALA ILE GLN SER HELIX 1 1 LEU A 101 MET A 113 1 13 HELIX 2 2 THR A 152 SER A 170 1 19 SHEET 1 A 3 LEU A 119 GLU A 126 0 SHEET 2 A 3 THR A 132 ILE A 140 -1 O GLN A 133 N VAL A 125 SHEET 3 A 3 ILE A 143 THR A 146 -1 O ILE A 143 N ILE A 140 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1