HEADER PEPTIDE BINDING PROTEIN 13-OCT-10 2L4S TITLE PROMISCUOUS BINDING AT THE CROSSROADS OF NUMEROUS CANCER PATHWAYS: TITLE 2 INSIGHT FROM THE BINDING OF GIP WITH GLUTAMINASE L COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAX1-BINDING PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLUTAMINASE-INTERACTING PROTEIN 3, TAX INTERACTION PROTEIN COMPND 5 1, TIP-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TAX1BP3, TIP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-3C/GIP KEYWDS PDZ DOMAIN, GIP, GLUTATMINASE L, PEPTIDE BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.L.ZOETEWEY,M.OVEE,M.BANERJEE,R.BHASKARAN,S.MOHANTY REVDAT 4 14-JUN-23 2L4S 1 REMARK REVDAT 3 05-FEB-20 2L4S 1 REMARK REVDAT 2 15-JUN-11 2L4S 1 JRNL REVDAT 1 06-APR-11 2L4S 0 JRNL AUTH D.L.ZOETEWEY,M.OVEE,M.BANERJEE,R.BHASKARAN,S.MOHANTY JRNL TITL PROMISCUOUS BINDING AT THE CROSSROADS OF NUMEROUS CANCER JRNL TITL 2 PATHWAYS: INSIGHT FROM THE BINDING OF GLUTAMINASE JRNL TITL 3 INTERACTING PROTEIN WITH GLUTAMINASE L. JRNL REF BIOCHEMISTRY V. 50 3528 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21417405 JRNL DOI 10.1021/BI102055Y REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.1, ARIA 1.1 REMARK 3 AUTHORS : NILGES, M. ET AL. (ARIA), NILGES, M. ET AL. (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000101956. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1 MM [U-99% 13C; U-99% 15N] REMARK 210 GLUTAMINASE INTERACTING PROTEIN REMARK 210 3, 50 MM SODIUM PHOSPHATE, 0.1% REMARK 210 W/V SODIUM AZIDE, 1 MM EDTA, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D C(CO)NH; 3D HN(CO)CA; REMARK 210 3D H(CCO)NH; 3D HCCH-TOCSY; 3D REMARK 210 HCCH-COSY; 3D 1H-15N TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA3 GLY A 35 HA ILE A 55 1.07 REMARK 500 HG2 GLN A 14 HD3 ARG A 111 1.22 REMARK 500 HB3 LYS A 50 HG3 LYS A 76 1.29 REMARK 500 HE22 GLN A 14 HG21 VAL A 16 1.30 REMARK 500 HB3 ASP A 38 H HIS A 90 1.31 REMARK 500 HB3 ASN A 44 HB2 GLU A 48 1.34 REMARK 500 OD1 ASP A 52 HZ1 LYS A 53 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 7 41.49 -145.12 REMARK 500 1 VAL A 9 -44.40 75.16 REMARK 500 1 LYS A 20 139.07 -26.93 REMARK 500 1 GLN A 39 -166.37 -71.37 REMARK 500 1 SER A 42 32.21 -95.54 REMARK 500 1 ASN A 44 59.24 -178.72 REMARK 500 1 PHE A 46 -53.82 -134.24 REMARK 500 1 ASP A 49 -144.49 178.75 REMARK 500 1 ASP A 52 -120.78 44.81 REMARK 500 1 ILE A 73 -11.99 69.85 REMARK 500 1 THR A 86 -41.27 -137.22 REMARK 500 1 SER A 113 19.13 -159.93 REMARK 500 2 GLN A 7 86.95 57.25 REMARK 500 2 VAL A 9 -59.26 70.84 REMARK 500 2 LYS A 20 129.27 -28.82 REMARK 500 2 ASP A 40 113.36 -161.05 REMARK 500 2 ASN A 44 47.71 -178.09 REMARK 500 2 PHE A 46 -53.34 -121.60 REMARK 500 2 ASP A 49 -96.75 -175.20 REMARK 500 2 ASP A 52 -142.13 44.89 REMARK 500 2 MET A 87 -42.96 -143.66 REMARK 500 2 VAL A 88 165.54 -49.50 REMARK 500 2 GLN A 112 -108.48 -117.26 REMARK 500 2 GLN A 115 105.15 -54.51 REMARK 500 2 ALA A 117 21.85 -164.27 REMARK 500 3 GLN A 7 98.58 67.65 REMARK 500 3 VAL A 9 -54.19 73.96 REMARK 500 3 LYS A 20 133.89 -23.65 REMARK 500 3 GLN A 39 -100.17 -71.38 REMARK 500 3 ASN A 44 58.54 -177.73 REMARK 500 3 PHE A 46 -47.44 -134.86 REMARK 500 3 ASP A 49 -130.48 177.08 REMARK 500 3 ASP A 52 -80.34 73.03 REMARK 500 3 LYS A 53 29.85 -141.57 REMARK 500 3 VAL A 60 111.50 -167.73 REMARK 500 3 THR A 86 -35.85 -132.98 REMARK 500 3 MET A 87 78.17 -161.28 REMARK 500 3 LYS A 99 -79.18 -84.78 REMARK 500 3 ARG A 100 -26.55 174.11 REMARK 500 3 SER A 101 40.05 -160.89 REMARK 500 3 GLN A 112 -90.87 -119.66 REMARK 500 3 SER A 113 41.75 -151.33 REMARK 500 3 ALA A 117 87.16 59.22 REMARK 500 3 GLN A 119 71.07 62.03 REMARK 500 4 GLN A 7 97.01 65.37 REMARK 500 4 LYS A 20 135.22 -27.49 REMARK 500 4 ASN A 44 55.40 -158.02 REMARK 500 4 PHE A 46 22.37 -169.87 REMARK 500 4 ASP A 49 -121.94 -139.85 REMARK 500 4 ASP A 52 -166.05 -74.01 REMARK 500 REMARK 500 THIS ENTRY HAS 313 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 36 ILE A 37 1 149.34 REMARK 500 GLY A 36 ILE A 37 3 145.25 REMARK 500 GLY A 36 ILE A 37 8 146.72 REMARK 500 GLY A 36 ILE A 37 14 147.45 REMARK 500 GLY A 36 ILE A 37 15 149.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 20 TYR A 56 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17254 RELATED DB: BMRB REMARK 900 RELATED ID: 2L4T RELATED DB: PDB DBREF 2L4S A 1 124 UNP O14907 TX1B3_HUMAN 1 124 SEQRES 1 A 124 MET SER TYR ILE PRO GLY GLN PRO VAL THR ALA VAL VAL SEQRES 2 A 124 GLN ARG VAL GLU ILE HIS LYS LEU ARG GLN GLY GLU ASN SEQRES 3 A 124 LEU ILE LEU GLY PHE SER ILE GLY GLY GLY ILE ASP GLN SEQRES 4 A 124 ASP PRO SER GLN ASN PRO PHE SER GLU ASP LYS THR ASP SEQRES 5 A 124 LYS GLY ILE TYR VAL THR ARG VAL SER GLU GLY GLY PRO SEQRES 6 A 124 ALA GLU ILE ALA GLY LEU GLN ILE GLY ASP LYS ILE MET SEQRES 7 A 124 GLN VAL ASN GLY TRP ASP MET THR MET VAL THR HIS ASP SEQRES 8 A 124 GLN ALA ARG LYS ARG LEU THR LYS ARG SER GLU GLU VAL SEQRES 9 A 124 VAL ARG LEU LEU VAL THR ARG GLN SER LEU GLN LYS ALA SEQRES 10 A 124 VAL GLN GLN SER MET LEU SER HELIX 1 1 GLY A 64 GLY A 70 1 7 HELIX 2 2 THR A 89 THR A 98 1 10 SHEET 1 A 4 VAL A 12 ILE A 18 0 SHEET 2 A 4 VAL A 105 ARG A 111 -1 O VAL A 105 N ILE A 18 SHEET 3 A 4 LYS A 76 VAL A 80 -1 N GLN A 79 O LEU A 108 SHEET 4 A 4 ILE A 55 TYR A 56 -1 N ILE A 55 O ILE A 77 SHEET 1 B 4 VAL A 12 ILE A 18 0 SHEET 2 B 4 VAL A 105 ARG A 111 -1 O VAL A 105 N ILE A 18 SHEET 3 B 4 LYS A 76 VAL A 80 -1 N GLN A 79 O LEU A 108 SHEET 4 B 4 TRP A 83 ASP A 84 -1 O TRP A 83 N VAL A 80 SHEET 1 C 2 LEU A 21 GLN A 23 0 SHEET 2 C 2 ASN A 26 ILE A 28 -1 O ASN A 26 N GLN A 23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1