HEADER    PROTEIN TRANSPORT                       15-OCT-10   2L4W              
TITLE     NMR STRUCTURE OF THE XANTHOMONAS VIRB7                                
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: UNCHARACTERIZED PROTEIN;                                   
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: VIRB7-XAC2622, UNP RESIDUES 24-139;                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI;               
SOURCE   3 ORGANISM_COMMON: CITRUS CANKER;                                      
SOURCE   4 ORGANISM_TAXID: 190486;                                              
SOURCE   5 STRAIN: 306;                                                         
SOURCE   6 GENE: XAC2622;                                                       
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RP;                               
SOURCE  10 EXPRESSION_SYSTEM_VECTOR: PET28A                                     
KEYWDS    TYPE IV SECRETION SYSTEM, VIRB7, N0 DOMAIN, MEMBRANE PROTEIN,         
KEYWDS   2 XANTHOMONAS, LIPOPROTEIN, BACTERIAL OUTER MEMBRANE, PROTEIN          
KEYWDS   3 TRANSPORT                                                            
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    D.P.SOUZA,C.S.FARAH,R.K.SALINAS                                       
REVDAT   2   01-MAY-24 2L4W    1       REMARK SEQADV                            
REVDAT   1   01-JUN-11 2L4W    0                                                
JRNL        AUTH   D.P.SOUZA,M.O.ANDRADE,C.E.ALVAREZ-MARTINEZ,G.M.ARANTES,      
JRNL        AUTH 2 C.S.FARAH,R.K.SALINAS                                        
JRNL        TITL   A COMPONENT OF THE XANTHOMONADACEAE TYPE IV SECRETION SYSTEM 
JRNL        TITL 2 COMBINES A VIRB7 MOTIF WITH A N0 DOMAIN FOUND IN OUTER       
JRNL        TITL 3 MEMBRANE TRANSPORT PROTEINS.                                 
JRNL        REF    PLOS PATHOG.                  V.   7 02031 2011              
JRNL        REFN                   ISSN 1553-7366                               
JRNL        PMID   21589901                                                     
JRNL        DOI    10.1371/JOURNAL.PPAT.1002031                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NMRPIPE 97.027.12.56, HADDOCK 2.0, CNS 1.2           
REMARK   3   AUTHORS     : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX    
REMARK   3                 (NMRPIPE), CYRIL DOMINGUEZ, ROLF BOELENS AND         
REMARK   3                 ALEXANDRE M.J.J. BONVIN (HADDOCK), BRUNGER, ADAMS,   
REMARK   3                 CLORE, GROS, NILGES AND READ (CNS)                   
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: 300 STRUCTURES WERE CALCULATED USING      
REMARK   3  THE PROGRAM CYANA. 50 STRUCTURES WITH LOWEST TARGET FUNCTION        
REMARK   3  WERE SELECTED FOR FURTHER REFINEMENT., 50 CYANA STRUCTURES WERE     
REMARK   3  REFINED IN EXPLICIT SOLVENT USING THE HADDOCK PROGRAM. 20 LOWEST    
REMARK   3  ENERGY STRUCTURES WERE SELECTED.                                    
REMARK   4                                                                      
REMARK   4 2L4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000101960.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 313; 303                           
REMARK 210  PH                             : 5.0; 5.0                           
REMARK 210  IONIC STRENGTH                 : 0.06; 0.06                         
REMARK 210  PRESSURE                       : AMBIENT; AMBIENT                   
REMARK 210  SAMPLE CONTENTS                : 0.2 MM [U-99% 13C; U-99% 15N]      
REMARK 210                                   VIRB7 - XAC2622-1, 10 MM [U-99%    
REMARK 210                                   2H] SODIUM ACETATE-2, 50 MM        
REMARK 210                                   SODIUM CHLORIDE-3, 93% H2O/7%      
REMARK 210                                   D2O; 0.2 MM [U-99% 13C; U-99%      
REMARK 210                                   15N] VIRB7 - XAC2622-4, 10 MM [U-  
REMARK 210                                   99% 2H] SODIUM ACETATE-5, 50 MM    
REMARK 210                                   SODIUM CHLORIDE-6, 100% D2O        
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   2D 1H-1H TOCSY; 2D 1H-1H NOESY;    
REMARK 210                                   3D HNCO; 3D HN(CA)CO; 3D HNCA;     
REMARK 210                                   3D HN(CO)CA; 3D HNCACB; 3D         
REMARK 210                                   CBCA(CO)NH; 3D C(CO)NH; 3D         
REMARK 210                                   HBHA(CO)NH; 3D H(CCO)NH; 3D HCCH-  
REMARK 210                                   TOCSY; 3D HNHA; 3D 1H-15N NOESY;   
REMARK 210                                   3D 1H-15N TOCSY; 3D 1H-13C NOESY;  
REMARK 210                                   2D 1H-15N HSQC J-MODULATED         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 600 MHZ; 800 MHZ          
REMARK 210  SPECTROMETER MODEL             : DRX; INOVA; AVANCE                 
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER; VARIAN                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CCPNMR ANALYSIS VERSION 1.0.       
REMARK 210                                   RELEASE 15, TALOS, CYANA 2.1,      
REMARK 210                                   PALES 2.1, MODULE 2 2, NMRDRAW     
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS,            
REMARK 210                                   SIMULATED ANNEALING CARTESIAN      
REMARK 210                                   DYNAMICS                           
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 300                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HZ2  LYS A    65     OE2  GLU A    69              1.59            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  2 LYS A  25      134.77     68.67                                   
REMARK 500  2 TRP A  34       80.41     59.57                                   
REMARK 500  3 MET A  23      -78.45    -76.48                                   
REMARK 500  4 ARG A  33     -167.88    -78.92                                   
REMARK 500  4 PRO A  92       -2.13    -59.33                                   
REMARK 500  4 VAL A 133       28.11   -145.66                                   
REMARK 500  5 ASP A  29     -164.58   -112.15                                   
REMARK 500  5 PHE A  30       34.45    -97.88                                   
REMARK 500  5 PRO A  44       94.99    -67.69                                   
REMARK 500  5 THR A  51      107.57    -55.42                                   
REMARK 500  5 PRO A  92       -2.93    -58.71                                   
REMARK 500  6 ALA A  27      156.11     70.86                                   
REMARK 500  6 PHE A  40      -76.45    -75.72                                   
REMARK 500  6 ASN A  82       48.44   -107.19                                   
REMARK 500  6 PRO A  92        6.78    -68.16                                   
REMARK 500  6 ALA A 137      -51.44   -148.52                                   
REMARK 500  7 HIS A  22       70.12   -100.62                                   
REMARK 500  7 PRO A  44       93.30    -61.76                                   
REMARK 500  7 PRO A  92        5.14    -65.92                                   
REMARK 500  8 THR A  24      149.55   -173.57                                   
REMARK 500  8 ALA A  27      156.82     68.59                                   
REMARK 500  8 LEU A  49       79.43   -112.75                                   
REMARK 500  8 SER A 134       44.40   -152.51                                   
REMARK 500  9 HIS A  39      -34.80   -147.66                                   
REMARK 500  9 PHE A  40       55.05   -153.95                                   
REMARK 500 10 THR A  51      105.52    -58.75                                   
REMARK 500 10 ALA A 123      -89.61     64.57                                   
REMARK 500 11 PRO A  28       36.56    -80.81                                   
REMARK 500 11 PHE A  30       76.78   -151.99                                   
REMARK 500 11 LYS A  35       81.67   -153.80                                   
REMARK 500 11 HIS A  39       87.66   -151.93                                   
REMARK 500 11 PHE A  40       75.09   -153.94                                   
REMARK 500 11 PRO A  44      103.43    -57.89                                   
REMARK 500 11 LEU A  49       71.58   -109.81                                   
REMARK 500 12 GLU A  46       79.02   -117.06                                   
REMARK 500 14 PRO A  28     -158.86    -72.87                                   
REMARK 500 14 ASN A  38        8.25   -150.56                                   
REMARK 500 14 PRO A  44       96.65    -60.32                                   
REMARK 500 15 LYS A  25       77.26     56.63                                   
REMARK 500 15 THR A  51      109.15    -57.58                                   
REMARK 500 16 PHE A  40       60.08   -105.38                                   
REMARK 500 16 PRO A  92       -7.28    -58.17                                   
REMARK 500 16 SER A 134       55.00   -159.13                                   
REMARK 500 17 HIS A  39      -70.06    -74.48                                   
REMARK 500 17 THR A  45       79.66   -150.90                                   
REMARK 500 17 LEU A  89      109.18    -58.36                                   
REMARK 500 18 HIS A  22       96.95   -160.12                                   
REMARK 500 18 THR A  45       87.82   -154.18                                   
REMARK 500 18 GLU A  46       73.06   -102.58                                   
REMARK 500 18 PRO A  92        0.91    -65.36                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      56 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3OV5   RELATED DB: PDB                                   
REMARK 900 ENTRY CONTAINING THE X-RAY CRYSTAL STRUCTURE FOR THE XAC2622         
REMARK 900 GLOBULAR DOMAIN                                                      
REMARK 900 RELATED ID: 17257   RELATED DB: BMRB                                 
DBREF  2L4W A   24   139  UNP    Q8PJB3   Q8PJB3_XANAC    24    139             
SEQADV 2L4W GLY A   20  UNP  Q8PJB3              EXPRESSION TAG                 
SEQADV 2L4W SER A   21  UNP  Q8PJB3              EXPRESSION TAG                 
SEQADV 2L4W HIS A   22  UNP  Q8PJB3              EXPRESSION TAG                 
SEQADV 2L4W MET A   23  UNP  Q8PJB3              EXPRESSION TAG                 
SEQRES   1 A  120  GLY SER HIS MET THR LYS PRO ALA PRO ASP PHE GLY GLY          
SEQRES   2 A  120  ARG TRP LYS HIS VAL ASN HIS PHE ASP GLU ALA PRO THR          
SEQRES   3 A  120  GLU ILE PRO LEU TYR THR SER TYR THR TYR GLN ALA THR          
SEQRES   4 A  120  PRO MET ASP GLY THR LEU LYS THR MET LEU GLU ARG TRP          
SEQRES   5 A  120  ALA ALA ASP SER ASN MET GLN LEU SER TYR ASN LEU PRO          
SEQRES   6 A  120  SER ASP TYR THR LEU ILE GLY PRO VAL SER ALA ILE SER          
SEQRES   7 A  120  THR THR SER VAL GLN GLN ALA ALA THR GLU LEU SER ALA          
SEQRES   8 A  120  VAL TYR ALA ALA GLN GLY VAL SER VAL SER VAL SER ALA          
SEQRES   9 A  120  ASN LYS LEU LEU VAL GLN PRO VAL PRO VAL SER SER GLY          
SEQRES  10 A  120  ALA LYS LEU                                                  
HELIX    1   1 THR A   63  SER A   75  1                                  13    
HELIX    2   2 SER A  100  ALA A  113  1                                  14    
SHEET    1   A 3 GLN A  78  TYR A  81  0                                        
SHEET    2   A 3 LYS A 125  PRO A 130  1  O  LEU A 126   N  SER A  80           
SHEET    3   A 3 VAL A 117  VAL A 121 -1  N  SER A 120   O  LEU A 127           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1