data_2L55 # _entry.id 2L55 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L55 pdb_00002l55 10.2210/pdb2l55/pdb RCSB RCSB101969 ? ? BMRB 17266 ? ? WWPDB D_1000101969 ? ? # _pdbx_database_related.db_id 17266 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L55 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-10-25 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bersch, B.' 1 'Derfoufi, K.' 2 'Vandenbussche, G.' 3 # _citation.id primary _citation.title ;Structural and Metal Binding Characterization of the C-Terminal Metallochaperone Domain of Membrane Fusion Protein SilB from Cupriavidus metallidurans CH34. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 50 _citation.page_first 2194 _citation.page_last 2204 _citation.year 2011 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21299248 _citation.pdbx_database_id_DOI 10.1021/bi200005k # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bersch, B.' 1 ? primary 'Derfoufi, K.M.' 2 ? primary 'De Angelis, F.' 3 ? primary 'Auquier, V.' 4 ? primary 'Ngonlong Ekende, E.' 5 ? primary 'Mergeay, M.' 6 ? primary 'Ruysschaert, J.M.' 7 ? primary 'Vandenbussche, G.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'SilB,Silver efflux protein, MFP component of the three components proton antiporter metal efflux system' _entity.formula_weight 8550.808 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'unp residues 440-521' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Silver efflux protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPEHRAVGRIQSIGERSLIIAHEAIPSAQWGAMTMEFAAPPAGLPQGLKAGDRVAFSFRLDPHGMATLVTVAPQVQTAGA KP ; _entity_poly.pdbx_seq_one_letter_code_can ;GPEHRAVGRIQSIGERSLIIAHEAIPSAQWGAMTMEFAAPPAGLPQGLKAGDRVAFSFRLDPHGMATLVTVAPQVQTAGA KP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLU n 1 4 HIS n 1 5 ARG n 1 6 ALA n 1 7 VAL n 1 8 GLY n 1 9 ARG n 1 10 ILE n 1 11 GLN n 1 12 SER n 1 13 ILE n 1 14 GLY n 1 15 GLU n 1 16 ARG n 1 17 SER n 1 18 LEU n 1 19 ILE n 1 20 ILE n 1 21 ALA n 1 22 HIS n 1 23 GLU n 1 24 ALA n 1 25 ILE n 1 26 PRO n 1 27 SER n 1 28 ALA n 1 29 GLN n 1 30 TRP n 1 31 GLY n 1 32 ALA n 1 33 MET n 1 34 THR n 1 35 MET n 1 36 GLU n 1 37 PHE n 1 38 ALA n 1 39 ALA n 1 40 PRO n 1 41 PRO n 1 42 ALA n 1 43 GLY n 1 44 LEU n 1 45 PRO n 1 46 GLN n 1 47 GLY n 1 48 LEU n 1 49 LYS n 1 50 ALA n 1 51 GLY n 1 52 ASP n 1 53 ARG n 1 54 VAL n 1 55 ALA n 1 56 PHE n 1 57 SER n 1 58 PHE n 1 59 ARG n 1 60 LEU n 1 61 ASP n 1 62 PRO n 1 63 HIS n 1 64 GLY n 1 65 MET n 1 66 ALA n 1 67 THR n 1 68 LEU n 1 69 VAL n 1 70 THR n 1 71 VAL n 1 72 ALA n 1 73 PRO n 1 74 GLN n 1 75 VAL n 1 76 GLN n 1 77 THR n 1 78 ALA n 1 79 GLY n 1 80 ALA n 1 81 LYS n 1 82 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Rmet_6135, silB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CH34 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cupriavidus metallidurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 266264 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q58AF3_RALME _struct_ref.pdbx_db_accession Q58AF3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPEHRAVGRIQSIGERSLIIAHEAIPSAQWGAMTMEFAAPPAGLPQGLKAGDRVAFSFRLDPHGMATLVTVAPQVQTAGA KP ; _struct_ref.pdbx_align_begin 440 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2L55 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 82 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q58AF3 _struct_ref_seq.db_align_beg 440 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 521 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 82 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 2 '2D 1H-13C HSQC' 1 3 2 '3D HNCO' 1 4 2 '3D HNCACB' 1 5 2 '3D HN(CO)CA' 1 6 2 '3D HN(COCA)CB' 1 7 2 3D-intraHNCA 1 8 2 '3D-intraHN(CA)CB' 1 9 2 '2D 1H-15N HADAMAC' 1 10 2 '3D C(CO)NH' 1 11 1 '3D 1H-15N NOESY' 1 12 2 '3D 1H-13C NOESY' 1 13 3 '2D 1H-1H NOESY' 1 14 1 'T1 relaxation' 1 15 1 'T1rho relaxation' 1 16 1 'T2 relaxation' 1 17 1 'Heteronuclear NOE' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-100% 15N] protein, 50 mM MES, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1 mM [U-100% 13C; U-100% 15N] protein, 50 mM MES, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '1 mM [U-100% 15N] protein, 50 mM MES, 100% D2O' 3 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian VNMRS 1 'Varian VNMRS' 600 Varian VNMRS 2 'Varian VNMRS' 600 Varian VNMRS 3 'Varian VNMRS' # _pdbx_nmr_refine.entry_id 2L55 _pdbx_nmr_refine.method 'simulated annealing, simulated annealing, molecular dynamics' _pdbx_nmr_refine.details 'CYANA (UNIO08), CNS, CNS, water refinement' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L55 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation -6.5 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.39 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L55 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 Varian collection VnmrJ ? 2 'Johnson, One Moon Scientific' 'data analysis' NMRView ? 3 'Lescop, Brutscher' 'chemical shift assignment' BATCH ? 4 'Torsten Herrmann' 'peak picking' UNIO08 ? 5 'Torsten Herrmann' 'chemical shift assignment' UNIO08 ? 6 'Torsten Herrmann' 'structure solution' UNIO08 ? 7 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS ? 8 'AG Palmer' 'data analysis' curvefit ? 9 'Cornilescu, Delaglio and Bax' 'determination of dihedral angles' TALOS ? 10 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 11 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2L55 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L55 _struct.title 'Solution structure of the C-terminal domain of SilB from Cupriavidus metallidurans' _struct.pdbx_model_details 'fewest violations, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L55 _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'apo form, Ag(I)-binding site, Cu(I)-binding site, CusF ortholog, METAL BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 3 ? SER A 12 ? GLU A 3 SER A 12 A 2 SER A 17 ? HIS A 22 ? SER A 17 HIS A 22 A 3 MET A 33 ? ALA A 38 ? MET A 33 ALA A 38 A 4 MET A 65 ? PRO A 73 ? MET A 65 PRO A 73 A 5 ARG A 53 ? ASP A 61 ? ARG A 53 ASP A 61 A 6 GLU A 3 ? SER A 12 ? GLU A 3 SER A 12 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 9 ? N ARG A 9 O ALA A 21 ? O ALA A 21 A 2 3 N ILE A 20 ? N ILE A 20 O MET A 35 ? O MET A 35 A 3 4 N ALA A 38 ? N ALA A 38 O ALA A 66 ? O ALA A 66 A 4 5 O ALA A 72 ? O ALA A 72 N ALA A 55 ? N ALA A 55 A 5 6 O PHE A 58 ? O PHE A 58 N HIS A 4 ? N HIS A 4 # _atom_sites.entry_id 2L55 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 MET 35 35 35 MET MET A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 PRO 82 82 82 PRO PRO A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-05 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' Other 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_database_status 2 3 'Structure model' pdbx_nmr_software 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.022 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.001 _pdbx_nmr_ensemble_rms.entry_id 2L55 _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'SilB(440-521)-1' 1 ? mM '[U-100% 15N]' 1 MES-2 50 ? mM ? 1 'SilB(440-521)-3' 1 ? mM '[U-100% 13C; U-100% 15N]' 2 MES-4 50 ? mM ? 2 'SilB(440-521)-5' 1 ? mM '[U-100% 15N]' 3 MES-6 50 ? mM ? 3 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2L55 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1597 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 11 _pdbx_validate_close_contact.auth_atom_id_1 HB2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 61 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HB2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 MET _pdbx_validate_close_contact.auth_seq_id_2 65 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 25 ? ? 69.13 89.60 2 1 LEU A 48 ? ? -140.95 42.81 3 1 ALA A 50 ? ? -50.84 106.51 4 1 GLN A 76 ? ? 65.55 110.24 5 1 ALA A 78 ? ? 66.42 -75.99 6 2 GLU A 23 ? ? -69.27 -165.18 7 2 ALA A 32 ? ? 70.58 119.66 8 2 MET A 33 ? ? -171.77 146.81 9 2 PRO A 62 ? ? -68.15 1.91 10 2 VAL A 69 ? ? -102.99 -63.22 11 2 GLN A 76 ? ? -38.50 -37.72 12 3 GLU A 23 ? ? -72.08 -166.03 13 3 ILE A 25 ? ? 62.70 83.77 14 3 PRO A 45 ? ? -71.46 -163.78 15 3 GLN A 76 ? ? 48.00 -153.14 16 3 ALA A 78 ? ? -79.90 21.63 17 4 ARG A 16 ? ? -144.01 15.05 18 4 GLU A 23 ? ? -65.70 -165.69 19 4 ILE A 25 ? ? 70.72 83.49 20 4 ALA A 32 ? ? 66.30 114.08 21 4 PRO A 45 ? ? -59.81 -178.59 22 4 GLN A 76 ? ? 71.34 -174.61 23 4 THR A 77 ? ? -66.52 96.75 24 4 ALA A 80 ? ? 63.57 -163.34 25 5 ARG A 16 ? ? -146.82 -6.73 26 5 GLU A 23 ? ? -70.99 -158.95 27 5 ILE A 25 ? ? 68.72 92.61 28 5 ALA A 32 ? ? 70.04 123.34 29 5 PRO A 45 ? ? -74.50 -165.96 30 5 GLN A 76 ? ? 69.08 163.73 31 5 THR A 77 ? ? -61.05 99.18 32 6 GLU A 23 ? ? -66.15 -166.00 33 6 ILE A 25 ? ? 75.18 92.44 34 6 ALA A 32 ? ? 69.02 128.80 35 6 MET A 33 ? ? -171.73 146.47 36 6 PRO A 45 ? ? -78.52 -164.14 37 6 LEU A 48 ? ? -143.70 47.84 38 6 ALA A 50 ? ? -48.93 106.54 39 6 PRO A 62 ? ? -67.02 1.30 40 6 GLN A 76 ? ? 67.75 -90.20 41 7 GLU A 23 ? ? -69.74 -168.95 42 7 ILE A 25 ? ? -47.95 102.87 43 7 ALA A 32 ? ? 55.98 93.20 44 7 ALA A 50 ? ? -49.02 107.66 45 7 PRO A 73 ? ? -59.37 103.20 46 7 GLN A 76 ? ? 50.00 -108.89 47 8 ARG A 16 ? ? -146.42 12.68 48 8 GLU A 23 ? ? -63.71 -169.93 49 8 ILE A 25 ? ? 73.67 87.27 50 8 ALA A 32 ? ? 59.39 92.43 51 8 PRO A 45 ? ? -74.69 -163.57 52 8 ALA A 50 ? ? -51.40 106.80 53 8 GLN A 76 ? ? 60.70 -98.93 54 9 ARG A 16 ? ? -143.46 17.42 55 9 GLU A 23 ? ? -70.08 -165.15 56 9 ILE A 25 ? ? 63.26 85.61 57 9 PRO A 45 ? ? -70.63 -163.19 58 9 GLN A 76 ? ? 66.58 -93.34 59 10 ARG A 16 ? ? -143.16 14.28 60 10 GLU A 23 ? ? -65.39 -165.16 61 10 ILE A 25 ? ? 74.41 91.41 62 10 ALA A 32 ? ? 69.52 112.38 63 10 PRO A 45 ? ? -73.79 -165.41 64 10 PRO A 62 ? ? -67.85 0.97 65 10 GLN A 76 ? ? 60.82 -96.46 66 11 GLU A 23 ? ? -66.55 -166.35 67 11 ILE A 25 ? ? 74.09 94.21 68 11 ALA A 32 ? ? 69.43 127.30 69 11 MET A 33 ? ? -171.82 147.96 70 11 GLN A 76 ? ? 42.02 -101.08 71 12 GLU A 23 ? ? -63.59 -169.51 72 12 ILE A 25 ? ? 67.86 86.15 73 12 ALA A 32 ? ? 68.53 123.79 74 12 ALA A 50 ? ? -54.14 103.17 75 12 PRO A 62 ? ? -66.82 1.42 76 12 GLN A 76 ? ? 58.13 -60.62 77 13 GLU A 23 ? ? -63.94 -170.54 78 13 ILE A 25 ? ? 71.95 90.06 79 13 PRO A 45 ? ? -78.09 -168.34 80 13 VAL A 69 ? ? -107.00 -67.36 81 13 GLN A 76 ? ? 68.64 -157.53 82 13 THR A 77 ? ? -68.69 99.17 83 13 ALA A 80 ? ? 69.54 168.04 84 14 GLU A 23 ? ? -71.12 -164.51 85 14 ALA A 32 ? ? 55.09 101.94 86 14 VAL A 75 ? ? -155.78 88.18 87 14 THR A 77 ? ? 55.18 75.94 88 15 GLU A 23 ? ? -79.10 -160.34 89 15 ILE A 25 ? ? 70.17 88.63 90 15 ALA A 32 ? ? 66.13 120.78 91 15 MET A 33 ? ? -171.66 145.27 92 15 PRO A 45 ? ? -74.91 -166.60 93 15 PRO A 62 ? ? -65.50 1.78 94 15 VAL A 69 ? ? -100.26 -66.14 95 15 PRO A 73 ? ? -52.40 106.27 96 15 VAL A 75 ? ? -160.05 79.94 97 15 GLN A 76 ? ? 71.50 -97.73 98 15 ALA A 78 ? ? 57.46 -150.97 99 15 ALA A 80 ? ? -173.76 -51.41 100 16 ALA A 50 ? ? -46.30 106.20 101 16 GLN A 76 ? ? 60.76 -27.83 102 16 THR A 77 ? ? -143.87 -2.34 103 16 ALA A 78 ? ? 72.85 148.96 104 16 ALA A 80 ? ? 58.88 -162.57 105 17 GLU A 23 ? ? -61.88 -169.81 106 17 ILE A 25 ? ? 76.90 86.74 107 17 ALA A 32 ? ? 65.17 120.15 108 17 GLN A 76 ? ? 54.81 152.88 109 18 GLU A 23 ? ? -70.13 -164.97 110 18 ILE A 25 ? ? 74.01 92.45 111 18 ALA A 32 ? ? 73.86 123.61 112 18 PRO A 45 ? ? -77.91 -167.27 113 18 PRO A 73 ? ? -57.52 109.43 114 18 GLN A 76 ? ? 47.90 -138.06 115 18 ALA A 78 ? ? 63.59 -74.42 116 19 GLU A 23 ? ? -67.64 -171.24 117 19 ILE A 25 ? ? 67.30 95.31 118 19 PRO A 62 ? ? -69.29 1.21 119 19 VAL A 69 ? ? -106.88 -63.96 120 19 ALA A 80 ? ? -171.46 18.65 121 20 GLU A 23 ? ? -68.77 -166.24 122 20 ILE A 25 ? ? 75.48 91.76 123 20 ALA A 32 ? ? 70.65 125.21 124 20 LEU A 48 ? ? -147.40 40.26 125 20 VAL A 69 ? ? -109.57 -64.50 126 20 GLN A 76 ? ? 47.21 -110.23 127 20 ALA A 80 ? ? 70.77 -58.18 #