data_2L5K # _entry.id 2L5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L5K pdb_00002l5k 10.2210/pdb2l5k/pdb RCSB RCSB101984 ? ? WWPDB D_1000101984 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-07 2 'Structure model' 1 1 2011-12-21 3 'Structure model' 1 2 2012-02-01 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L5K _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-11-02 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 17129 _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'truncated 25mer DNA aptamer' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cognet, J.' 1 'Baouendi, M.' 2 'Hantz, E.' 3 'Missailidis, S.' 4 'Herve du Penhoat, C.' 5 'Piotto, M.' 6 # _citation.id primary _citation.title 'Solution structure of a truncated anti-MUC1 DNA aptamer determined by mesoscale modeling and NMR.' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 279 _citation.page_first 479 _citation.page_last 490 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22129448 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2011.08440.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Baouendi, M.' 1 ? primary 'Cognet, J.A.' 2 ? primary 'Ferreira, C.S.' 3 ? primary 'Missailidis, S.' 4 ? primary 'Coutant, J.' 5 ? primary 'Piotto, M.' 6 ? primary 'Hantz, E.' 7 ? primary 'Herve du Penhoat, C.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-R(*(N68)P*G)-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*GP*GP*T)-3') ; _entity.formula_weight 8164.290 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(N68)(DG)(DC)(DA)(DG)(DT)(DT)(DG)(DA)(DT)(DC)(DC)(DT)(DT)(DT)(DG)(DG)(DA)(DT) (DA)(DC)(DC)(DC)(DT)(DG)(DG)(DT) ; _entity_poly.pdbx_seq_one_letter_code_can XGCAGTTGATCCTTTGGATACCCTGGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 N68 n 1 2 DG n 1 3 DC n 1 4 DA n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DG n 1 9 DA n 1 10 DT n 1 11 DC n 1 12 DC n 1 13 DT n 1 14 DT n 1 15 DT n 1 16 DG n 1 17 DG n 1 18 DA n 1 19 DT n 1 20 DA n 1 21 DC n 1 22 DC n 1 23 DC n 1 24 DT n 1 25 DG n 1 26 DG n 1 27 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthesized' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 N68 non-polymer . '6-aminohexyl dihydrogen phosphate' ? 'C6 H16 N O4 P' 197.169 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 N68 1 -1 ? ? ? A . n A 1 2 DG 2 0 ? ? ? A . n A 1 3 DC 3 1 1 DC DC A . n A 1 4 DA 4 2 2 DA DA A . n A 1 5 DG 5 3 3 DG DG A . n A 1 6 DT 6 4 4 DT DT A . n A 1 7 DT 7 5 5 DT DT A . n A 1 8 DG 8 6 6 DG DG A . n A 1 9 DA 9 7 7 DA DA A . n A 1 10 DT 10 8 8 DT DT A . n A 1 11 DC 11 9 9 DC DC A . n A 1 12 DC 12 10 10 DC DC A . n A 1 13 DT 13 11 11 DT DT A . n A 1 14 DT 14 12 12 DT DT A . n A 1 15 DT 15 13 13 DT DT A . n A 1 16 DG 16 14 14 DG DG A . n A 1 17 DG 17 15 15 DG DG A . n A 1 18 DA 18 16 16 DA DA A . n A 1 19 DT 19 17 17 DT DT A . n A 1 20 DA 20 18 18 DA DA A . n A 1 21 DC 21 19 19 DC DC A . n A 1 22 DC 22 20 20 DC DC A . n A 1 23 DC 23 21 21 DC DC A . n A 1 24 DT 24 22 22 DT DT A . n A 1 25 DG 25 23 23 DG DG A . n A 1 26 DG 26 24 ? ? ? A . n A 1 27 DT 27 25 ? ? ? A . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DC 1 ? P ? A DC 3 P 2 1 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 3 1 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 4 2 Y 1 A DC 1 ? P ? A DC 3 P 5 2 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 6 2 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 7 3 Y 1 A DC 1 ? P ? A DC 3 P 8 3 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 9 3 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 10 4 Y 1 A DC 1 ? P ? A DC 3 P 11 4 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 12 4 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 13 5 Y 1 A DC 1 ? P ? A DC 3 P 14 5 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 15 5 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 16 6 Y 1 A DC 1 ? P ? A DC 3 P 17 6 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 18 6 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 19 7 Y 1 A DC 1 ? P ? A DC 3 P 20 7 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 21 7 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 22 8 Y 1 A DC 1 ? P ? A DC 3 P 23 8 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 24 8 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 25 9 Y 1 A DC 1 ? P ? A DC 3 P 26 9 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 27 9 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 28 10 Y 1 A DC 1 ? P ? A DC 3 P 29 10 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 30 10 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 31 11 Y 1 A DC 1 ? P ? A DC 3 P 32 11 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 33 11 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 34 12 Y 1 A DC 1 ? P ? A DC 3 P 35 12 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 36 12 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 37 13 Y 1 A DC 1 ? P ? A DC 3 P 38 13 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 39 13 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 40 14 Y 1 A DC 1 ? P ? A DC 3 P 41 14 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 42 14 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 43 15 Y 1 A DC 1 ? P ? A DC 3 P 44 15 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 45 15 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 46 16 Y 1 A DC 1 ? P ? A DC 3 P 47 16 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 48 16 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 49 17 Y 1 A DC 1 ? P ? A DC 3 P 50 17 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 51 17 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 52 18 Y 1 A DC 1 ? P ? A DC 3 P 53 18 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 54 18 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 55 19 Y 1 A DC 1 ? P ? A DC 3 P 56 19 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 57 19 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 58 20 Y 1 A DC 1 ? P ? A DC 3 P 59 20 Y 1 A DC 1 ? OP1 ? A DC 3 OP1 60 20 Y 1 A DC 1 ? OP2 ? A DC 3 OP2 # _cell.entry_id 2L5K _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2L5K _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;This entry contains the NMR solution structures (DYANA models 1-20)and a Biopolymer Chain Elasticity structure (BCE model 21) of the truncated 23-mer DNA MUC1 aptamer. The coordinates of two bridging water molcules are available for model 21 upon request to J. Cognet. The 23-mer sequence was extracted from the S1.3/S2.2 total MUC1 aptamer sequence reported previously (Ferreira et al, Tumor Biology 2006). The 23-mer sequence includes all of the nucleotides that bind the VNTR MUC1 peptides. NMR data were obtained for a longer sequence (25-mer with dangling ends on both 5' and 3' ends) but the sequence was shortened to facilitate convergence in the simulated annealing (DYANA) protocol. VNTR peptides are targets for tumour diagnostics and therapeutics. ; _exptl.entry_id 2L5K _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L5K _struct.title 'Solution structure of truncated 23-mer DNA MUC1 aptamer' _struct.pdbx_model_details 'fewest violations, model 1' _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L5K _struct_keywords.pdbx_keywords DNA _struct_keywords.text ;NMR solution structure, DYANA and BCE models, TTT triloop containing DNA, truncated DNA MUC1 aptamer sequence, binding nucleotides, DNA ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2L5K _struct_ref.pdbx_db_accession 2L5K _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code CAGTTGATCCTTTGGATACCCTG _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2L5K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2L5K _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 23 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 23 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 25 N1 ? ? A DC 1 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 25 O6 ? ? A DC 1 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 25 N2 ? ? A DC 1 A DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 24 N3 ? ? A DA 2 A DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 24 O4 ? ? A DA 2 A DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 23 N3 ? ? A DG 3 A DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 23 O2 ? ? A DG 3 A DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 23 N4 ? ? A DG 3 A DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DC 22 N4 ? ? A DT 4 A DC 20 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog10 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DA 20 N1 ? ? A DG 6 A DA 18 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog11 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DA 20 N6 ? ? A DG 6 A DA 18 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog12 hydrog ? ? A DA 9 N1 ? ? ? 1_555 A DT 19 N3 ? ? A DA 7 A DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 9 N6 ? ? ? 1_555 A DT 19 O4 ? ? A DA 7 A DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 10 N3 ? ? ? 1_555 A DA 18 N1 ? ? A DT 8 A DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 10 O4 ? ? ? 1_555 A DA 18 N6 ? ? A DT 8 A DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 11 N3 ? ? ? 1_555 A DG 17 N1 ? ? A DC 9 A DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 11 N4 ? ? ? 1_555 A DG 17 O6 ? ? A DC 9 A DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 11 O2 ? ? ? 1_555 A DG 17 N2 ? ? A DC 9 A DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 12 N3 ? ? ? 1_555 A DG 16 N1 ? ? A DC 10 A DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 12 N4 ? ? ? 1_555 A DG 16 O6 ? ? A DC 10 A DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 12 O2 ? ? ? 1_555 A DG 16 N2 ? ? A DC 10 A DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.32 108.30 2.02 0.30 N 2 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.45 122.90 -4.45 0.60 N 3 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.27 108.30 2.97 0.30 N 4 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.17 108.30 1.87 0.30 N 5 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.12 108.30 1.82 0.30 N 6 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.64 108.30 4.34 0.30 N 7 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.27 108.30 4.97 0.30 N 8 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.37 108.30 2.07 0.30 N 9 1 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.35 108.30 2.05 0.30 N 10 1 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.57 108.30 3.27 0.30 N 11 1 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.25 108.30 1.95 0.30 N 12 1 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.27 108.30 2.97 0.30 N 13 1 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.21 108.30 3.91 0.30 N 14 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.40 108.30 2.10 0.30 N 15 2 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.35 122.90 -4.55 0.60 N 16 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.21 108.30 2.91 0.30 N 17 2 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.19 108.30 1.89 0.30 N 18 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.60 108.30 4.30 0.30 N 19 2 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.30 108.30 5.00 0.30 N 20 2 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.52 122.90 -4.38 0.60 N 21 2 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.31 108.30 2.01 0.30 N 22 2 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.53 108.30 2.23 0.30 N 23 2 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.47 108.30 3.17 0.30 N 24 2 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.23 108.30 1.93 0.30 N 25 2 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.05 108.30 2.75 0.30 N 26 2 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.21 122.90 -3.69 0.60 N 27 2 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.33 108.30 4.03 0.30 N 28 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.19 108.30 1.89 0.30 N 29 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.19 108.30 1.89 0.30 N 30 3 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.54 122.90 -4.36 0.60 N 31 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.03 108.30 2.73 0.30 N 32 3 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.24 108.30 1.94 0.30 N 33 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.64 108.30 4.34 0.30 N 34 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.35 108.30 5.05 0.30 N 35 3 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.06 122.90 -3.84 0.60 N 36 3 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.29 108.30 1.99 0.30 N 37 3 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.47 108.30 2.17 0.30 N 38 3 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.39 108.30 3.09 0.30 N 39 3 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.56 108.30 3.26 0.30 N 40 3 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.04 108.30 3.74 0.30 N 41 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.16 108.30 1.86 0.30 N 42 4 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.37 122.90 -4.53 0.60 N 43 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.09 108.30 2.79 0.30 N 44 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.33 108.30 4.03 0.30 N 45 4 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.44 108.30 5.14 0.30 N 46 4 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.22 122.90 -3.68 0.60 N 47 4 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.22 108.30 1.92 0.30 N 48 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.12 108.30 1.82 0.30 N 49 4 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.40 108.30 2.10 0.30 N 50 4 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.21 108.30 2.91 0.30 N 51 4 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.58 108.30 3.28 0.30 N 52 4 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.25 122.90 -3.65 0.60 N 53 4 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.11 108.30 3.81 0.30 N 54 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.15 108.30 1.85 0.30 N 55 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.17 108.30 1.87 0.30 N 56 5 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.62 122.90 -4.28 0.60 N 57 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.07 108.30 2.77 0.30 N 58 5 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.15 108.30 1.85 0.30 N 59 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.47 108.30 4.17 0.30 N 60 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.44 108.30 5.14 0.30 N 61 5 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.14 122.90 -3.76 0.60 N 62 5 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.23 108.30 1.93 0.30 N 63 5 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.27 122.90 -3.63 0.60 N 64 5 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.49 108.30 2.19 0.30 N 65 5 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.48 108.30 3.18 0.30 N 66 5 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.49 108.30 3.19 0.30 N 67 5 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.99 108.30 3.69 0.30 N 68 6 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.21 122.90 -3.69 0.60 N 69 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.82 108.30 2.52 0.30 N 70 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.18 108.30 1.88 0.30 N 71 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.44 108.30 4.14 0.30 N 72 6 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.39 108.30 5.09 0.30 N 73 6 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.82 122.90 -4.08 0.60 N 74 6 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.41 108.30 2.11 0.30 N 75 6 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.45 108.30 2.15 0.30 N 76 6 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.54 108.30 3.24 0.30 N 77 6 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.83 108.30 3.53 0.30 N 78 6 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.01 108.30 3.71 0.30 N 79 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.27 108.30 1.97 0.30 N 80 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.18 108.30 1.88 0.30 N 81 7 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.55 122.90 -4.35 0.60 N 82 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.05 108.30 2.75 0.30 N 83 7 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.15 108.30 1.85 0.30 N 84 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.15 108.30 1.85 0.30 N 85 7 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.50 108.30 4.20 0.30 N 86 7 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.39 108.30 5.09 0.30 N 87 7 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.32 108.30 2.02 0.30 N 88 7 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.42 108.30 2.12 0.30 N 89 7 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.60 108.30 3.30 0.30 N 90 7 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.54 108.30 3.24 0.30 N 91 7 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.38 108.30 4.08 0.30 N 92 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.60 108.30 2.30 0.30 N 93 8 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.40 108.30 2.10 0.30 N 94 8 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.77 122.90 -4.13 0.60 N 95 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.13 108.30 2.83 0.30 N 96 8 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.34 108.30 2.04 0.30 N 97 8 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.12 108.30 1.82 0.30 N 98 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.58 108.30 4.28 0.30 N 99 8 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.16 108.30 4.86 0.30 N 100 8 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.60 122.90 -4.30 0.60 N 101 8 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.29 108.30 1.99 0.30 N 102 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.12 108.30 1.82 0.30 N 103 8 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.35 108.30 2.05 0.30 N 104 8 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.50 108.30 3.20 0.30 N 105 8 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.39 108.30 2.09 0.30 N 106 8 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.44 108.30 3.14 0.30 N 107 8 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.30 108.30 4.00 0.30 N 108 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.14 108.30 1.84 0.30 N 109 9 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.26 108.30 1.96 0.30 N 110 9 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.61 122.90 -4.29 0.60 N 111 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.09 108.30 2.79 0.30 N 112 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.45 108.30 4.15 0.30 N 113 9 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.42 108.30 5.12 0.30 N 114 9 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.15 122.90 -3.75 0.60 N 115 9 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.42 108.30 2.12 0.30 N 116 9 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.27 122.90 -3.63 0.60 N 117 9 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.42 108.30 2.12 0.30 N 118 9 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.45 108.30 3.15 0.30 N 119 9 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.82 108.30 3.52 0.30 N 120 9 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.11 108.30 3.81 0.30 N 121 10 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.30 108.30 2.00 0.30 N 122 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.02 122.90 -3.88 0.60 N 123 10 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.61 108.30 2.31 0.30 N 124 10 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.23 122.90 -3.67 0.60 N 125 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.91 108.30 2.61 0.30 N 126 10 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.11 108.30 1.81 0.30 N 127 10 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.17 108.30 1.87 0.30 N 128 10 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.50 108.30 4.20 0.30 N 129 10 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.07 108.30 4.77 0.30 N 130 10 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.20 108.30 1.90 0.30 N 131 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.19 108.30 1.89 0.30 N 132 10 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.54 108.30 2.24 0.30 N 133 10 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.71 108.30 3.41 0.30 N 134 10 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.66 108.30 2.36 0.30 N 135 10 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 110.25 108.30 1.95 0.30 N 136 10 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.52 108.30 4.22 0.30 N 137 11 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.25 108.30 1.95 0.30 N 138 11 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.16 108.30 1.86 0.30 N 139 11 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.49 122.90 -4.41 0.60 N 140 11 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.91 108.30 2.61 0.30 N 141 11 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.12 108.30 1.82 0.30 N 142 11 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.58 108.30 4.28 0.30 N 143 11 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.25 108.30 4.95 0.30 N 144 11 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 118.89 122.90 -4.01 0.60 N 145 11 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.25 108.30 1.95 0.30 N 146 11 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.32 108.30 2.02 0.30 N 147 11 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.50 108.30 3.20 0.30 N 148 11 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.57 108.30 3.27 0.30 N 149 11 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.95 108.30 3.65 0.30 N 150 12 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.12 108.30 1.82 0.30 N 151 12 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.48 122.90 -4.42 0.60 N 152 12 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.11 108.30 2.81 0.30 N 153 12 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.17 108.30 1.87 0.30 N 154 12 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.11 108.30 1.81 0.30 N 155 12 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.53 108.30 4.23 0.30 N 156 12 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.41 108.30 5.11 0.30 N 157 12 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.09 122.90 -3.81 0.60 N 158 12 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.26 108.30 1.96 0.30 N 159 12 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.11 108.30 1.81 0.30 N 160 12 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.52 108.30 2.22 0.30 N 161 12 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.40 108.30 3.10 0.30 N 162 12 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.55 108.30 3.25 0.30 N 163 12 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.07 108.30 3.77 0.30 N 164 13 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.23 108.30 1.93 0.30 N 165 13 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.60 122.90 -4.30 0.60 N 166 13 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.21 108.30 2.91 0.30 N 167 13 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.38 108.30 4.08 0.30 N 168 13 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.49 108.30 5.19 0.30 N 169 13 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.09 122.90 -3.81 0.60 N 170 13 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.23 108.30 1.93 0.30 N 171 13 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.20 122.90 -3.70 0.60 N 172 13 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.33 108.30 2.03 0.30 N 173 13 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.15 108.30 2.85 0.30 N 174 13 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.63 108.30 3.33 0.30 N 175 13 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.30 122.90 -3.60 0.60 N 176 13 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.96 108.30 3.66 0.30 N 177 14 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.78 108.30 3.48 0.30 N 178 14 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.10 108.30 1.80 0.30 N 179 14 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.58 122.90 -4.32 0.60 N 180 14 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.20 108.30 2.90 0.30 N 181 14 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.13 108.30 1.83 0.30 N 182 14 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.17 108.30 1.87 0.30 N 183 14 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.32 108.30 4.02 0.30 N 184 14 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.33 108.30 5.03 0.30 N 185 14 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.21 122.90 -3.69 0.60 N 186 14 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.22 108.30 1.92 0.30 N 187 14 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.24 122.90 -3.66 0.60 N 188 14 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.14 108.30 1.84 0.30 N 189 14 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.50 108.30 2.20 0.30 N 190 14 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.20 108.30 2.90 0.30 N 191 14 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.47 108.30 3.17 0.30 N 192 14 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.31 108.30 2.01 0.30 N 193 14 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.10 122.90 -3.80 0.60 N 194 14 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.50 108.30 4.20 0.30 N 195 15 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.24 108.30 4.94 0.30 N 196 15 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.51 108.30 2.21 0.30 N 197 15 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.10 108.30 1.80 0.30 N 198 15 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.57 122.90 -4.33 0.60 N 199 15 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.16 108.30 2.86 0.30 N 200 15 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.40 108.30 2.10 0.30 N 201 15 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.29 122.90 -3.61 0.60 N 202 15 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.15 108.30 1.85 0.30 N 203 15 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.60 108.30 4.30 0.30 N 204 15 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.28 108.30 4.98 0.30 N 205 15 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.27 108.30 1.97 0.30 N 206 15 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.36 108.30 2.06 0.30 N 207 15 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.41 108.30 3.11 0.30 N 208 15 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.46 108.30 3.16 0.30 N 209 15 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 110.33 108.30 2.03 0.30 N 210 15 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.68 108.30 2.38 0.30 N 211 15 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.17 122.90 -3.73 0.60 N 212 15 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.60 108.30 4.30 0.30 N 213 16 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.21 108.30 1.91 0.30 N 214 16 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.61 122.90 -4.29 0.60 N 215 16 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.26 108.30 2.96 0.30 N 216 16 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.31 108.30 2.01 0.30 N 217 16 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.15 108.30 1.85 0.30 N 218 16 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.24 108.30 1.94 0.30 N 219 16 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.65 108.30 4.35 0.30 N 220 16 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.38 108.30 5.08 0.30 N 221 16 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.59 108.30 2.29 0.30 N 222 16 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 119.05 122.90 -3.85 0.60 N 223 16 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.62 108.30 2.32 0.30 N 224 16 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.58 108.30 3.28 0.30 N 225 16 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.43 108.30 2.13 0.30 N 226 16 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.08 108.30 2.78 0.30 N 227 16 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.20 108.30 1.90 0.30 N 228 16 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.15 122.90 -3.75 0.60 N 229 16 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.46 108.30 4.16 0.30 N 230 17 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.23 108.30 1.93 0.30 N 231 17 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.59 122.90 -4.31 0.60 N 232 17 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.32 108.30 3.02 0.30 N 233 17 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.14 108.30 1.84 0.30 N 234 17 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.15 108.30 1.85 0.30 N 235 17 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.11 108.30 1.81 0.30 N 236 17 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.62 108.30 4.32 0.30 N 237 17 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.29 108.30 4.99 0.30 N 238 17 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.18 108.30 1.88 0.30 N 239 17 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.41 108.30 2.11 0.30 N 240 17 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.39 108.30 3.09 0.30 N 241 17 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.46 108.30 3.16 0.30 N 242 17 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.24 108.30 1.94 0.30 N 243 17 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.17 122.90 -3.73 0.60 N 244 17 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.47 108.30 4.17 0.30 N 245 18 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.30 108.30 2.00 0.30 N 246 18 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.33 108.30 2.03 0.30 N 247 18 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.69 122.90 -4.21 0.60 N 248 18 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.24 108.30 2.94 0.30 N 249 18 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.22 108.30 1.92 0.30 N 250 18 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.17 108.30 1.87 0.30 N 251 18 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.60 108.30 4.30 0.30 N 252 18 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.15 108.30 4.85 0.30 N 253 18 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.25 108.30 1.95 0.30 N 254 18 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.30 108.30 2.00 0.30 N 255 18 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.59 108.30 3.29 0.30 N 256 18 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.21 108.30 1.91 0.30 N 257 18 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.43 108.30 3.13 0.30 N 258 18 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.22 108.30 1.92 0.30 N 259 18 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.10 122.90 -3.80 0.60 N 260 18 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.65 108.30 4.35 0.30 N 261 19 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.28 108.30 1.98 0.30 N 262 19 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.25 108.30 1.95 0.30 N 263 19 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.57 122.90 -4.33 0.60 N 264 19 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.11 108.30 2.81 0.30 N 265 19 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.22 108.30 1.92 0.30 N 266 19 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.59 108.30 4.29 0.30 N 267 19 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.29 108.30 4.99 0.30 N 268 19 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.29 108.30 1.99 0.30 N 269 19 "O4'" A DA 16 ? ? "C1'" A DA 16 ? ? N9 A DA 16 ? ? 110.32 108.30 2.02 0.30 N 270 19 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.29 108.30 2.99 0.30 N 271 19 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.19 108.30 1.89 0.30 N 272 19 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.44 108.30 3.14 0.30 N 273 19 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.18 108.30 3.88 0.30 N 274 20 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.66 108.30 4.36 0.30 N 275 20 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.01 108.30 2.71 0.30 N 276 20 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.65 108.30 2.35 0.30 N 277 20 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.71 122.90 -4.19 0.60 N 278 20 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.26 108.30 2.96 0.30 N 279 20 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.35 108.30 2.05 0.30 N 280 20 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.18 108.30 1.88 0.30 N 281 20 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.22 122.90 -3.68 0.60 N 282 20 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.43 108.30 2.13 0.30 N 283 20 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.12 108.30 3.82 0.30 N 284 20 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.01 108.30 4.71 0.30 N 285 20 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.25 108.30 1.95 0.30 N 286 20 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.53 108.30 2.23 0.30 N 287 20 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.65 108.30 2.35 0.30 N 288 20 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.47 108.30 3.17 0.30 N 289 20 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.59 108.30 2.29 0.30 N 290 20 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 111.49 108.30 3.19 0.30 N 291 20 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 110.25 108.30 1.95 0.30 N 292 20 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.56 108.30 2.26 0.30 N 293 20 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.13 122.90 -3.77 0.60 N 294 20 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.62 108.30 4.32 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 8 ? ? 0.071 'SIDE CHAIN' 2 1 DT A 12 ? ? 0.076 'SIDE CHAIN' 3 1 DG A 23 ? ? 0.055 'SIDE CHAIN' 4 2 DT A 8 ? ? 0.073 'SIDE CHAIN' 5 2 DT A 12 ? ? 0.075 'SIDE CHAIN' 6 2 DG A 23 ? ? 0.056 'SIDE CHAIN' 7 3 DT A 8 ? ? 0.073 'SIDE CHAIN' 8 3 DT A 12 ? ? 0.080 'SIDE CHAIN' 9 3 DG A 23 ? ? 0.052 'SIDE CHAIN' 10 4 DT A 8 ? ? 0.079 'SIDE CHAIN' 11 4 DT A 12 ? ? 0.071 'SIDE CHAIN' 12 4 DG A 23 ? ? 0.054 'SIDE CHAIN' 13 5 DT A 8 ? ? 0.070 'SIDE CHAIN' 14 5 DT A 12 ? ? 0.080 'SIDE CHAIN' 15 5 DG A 23 ? ? 0.052 'SIDE CHAIN' 16 6 DT A 4 ? ? 0.093 'SIDE CHAIN' 17 6 DT A 8 ? ? 0.077 'SIDE CHAIN' 18 6 DT A 12 ? ? 0.074 'SIDE CHAIN' 19 6 DG A 23 ? ? 0.054 'SIDE CHAIN' 20 7 DT A 8 ? ? 0.073 'SIDE CHAIN' 21 7 DT A 12 ? ? 0.077 'SIDE CHAIN' 22 7 DG A 23 ? ? 0.059 'SIDE CHAIN' 23 8 DT A 8 ? ? 0.067 'SIDE CHAIN' 24 8 DT A 12 ? ? 0.075 'SIDE CHAIN' 25 8 DG A 23 ? ? 0.055 'SIDE CHAIN' 26 9 DT A 8 ? ? 0.074 'SIDE CHAIN' 27 9 DT A 12 ? ? 0.080 'SIDE CHAIN' 28 9 DG A 23 ? ? 0.055 'SIDE CHAIN' 29 10 DT A 8 ? ? 0.070 'SIDE CHAIN' 30 10 DT A 12 ? ? 0.072 'SIDE CHAIN' 31 10 DG A 23 ? ? 0.062 'SIDE CHAIN' 32 11 DT A 8 ? ? 0.070 'SIDE CHAIN' 33 11 DT A 12 ? ? 0.081 'SIDE CHAIN' 34 11 DG A 23 ? ? 0.051 'SIDE CHAIN' 35 12 DT A 8 ? ? 0.077 'SIDE CHAIN' 36 12 DT A 12 ? ? 0.080 'SIDE CHAIN' 37 12 DG A 23 ? ? 0.052 'SIDE CHAIN' 38 13 DT A 8 ? ? 0.074 'SIDE CHAIN' 39 13 DT A 12 ? ? 0.084 'SIDE CHAIN' 40 13 DG A 23 ? ? 0.058 'SIDE CHAIN' 41 14 DT A 8 ? ? 0.074 'SIDE CHAIN' 42 14 DT A 12 ? ? 0.077 'SIDE CHAIN' 43 14 DG A 23 ? ? 0.061 'SIDE CHAIN' 44 15 DT A 8 ? ? 0.068 'SIDE CHAIN' 45 15 DT A 12 ? ? 0.077 'SIDE CHAIN' 46 15 DG A 23 ? ? 0.059 'SIDE CHAIN' 47 16 DT A 8 ? ? 0.067 'SIDE CHAIN' 48 16 DT A 12 ? ? 0.068 'SIDE CHAIN' 49 16 DG A 23 ? ? 0.060 'SIDE CHAIN' 50 17 DT A 8 ? ? 0.071 'SIDE CHAIN' 51 17 DT A 12 ? ? 0.076 'SIDE CHAIN' 52 17 DG A 23 ? ? 0.061 'SIDE CHAIN' 53 18 DT A 8 ? ? 0.068 'SIDE CHAIN' 54 18 DT A 12 ? ? 0.077 'SIDE CHAIN' 55 18 DG A 23 ? ? 0.062 'SIDE CHAIN' 56 19 DT A 8 ? ? 0.072 'SIDE CHAIN' 57 19 DT A 12 ? ? 0.076 'SIDE CHAIN' 58 19 DG A 23 ? ? 0.051 'SIDE CHAIN' 59 20 DT A 12 ? ? 0.059 'SIDE CHAIN' 60 20 DG A 23 ? ? 0.062 'SIDE CHAIN' # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation 0.2 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L5K _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0.10 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 0.04 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.14 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method 'potential energy function' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.61 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.02 _pdbx_nmr_ensemble_rms.entry_id 2L5K _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L5K _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;1 mM DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3'), 20 mM sodium phosphate, 5 uM sodium azide, 50 mM sodium chloride, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;2 mM DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3'), 20 mM sodium phosphate, 50 mM sodium chloride, 5 uM sodium azide, 100% D2O ; 2 '100% D2O' ;1 mM DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3'), 20 mM sodium phosphate, 50 mM sodium chloride, 5 uM sodium azide, 90% H2O/10% D2O ; 3 '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3')-1 ; 1 ? mM ? 1 'sodium phosphate-2' 20 ? mM ? 1 'sodium azide-3' 5 ? uM ? 1 'sodium chloride-4' 50 ? mM ? 1 ;DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3')-5 ; 2 ? mM ? 2 'sodium phosphate-6' 20 ? mM ? 2 'sodium chloride-7' 50 ? mM ? 2 'sodium azide-8' 5 ? uM ? 2 ;DNA (5'-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*G)-3')-9 ; 1 ? mM ? 3 'sodium phosphate-10' 20 ? mM ? 3 'sodium chloride-11' 50 ? mM ? 3 'sodium azide-12' 5 ? uM ? 3 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 50 6.5 ambient ? 298 K 2 50 6.5 1 atm 264.5 K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-1H TOCSY' 1 2 2 '2D 1H-13C HSQC' 1 3 2 '2D 1H-31P COSY' 1 4 2 '2D DQF-COSY' 1 5 2 '2D 1H-1H TOCSY' 1 6 2 '2D 1H-1H NOESY' 1 7 1 '2D 1H-1H TOCSY' 1 8 1 '2D 1H-1H NOESY' 2 9 3 '2D 1H-1H TOCSY' 2 10 3 '2D 1H-1H NOESY' # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2L5K _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count 24 _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count 23 _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count 23 _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count 23 _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count 22 _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count 22 _pdbx_nmr_constraints.NA_other-angle_constraints_total_count 24 _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count 55 _pdbx_nmr_constraints.NOE_constraints_total 607 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 198 _pdbx_nmr_constraints.NOE_long_range_total_count 35 _pdbx_nmr_constraints.NOE_medium_range_total_count 4 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 161 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # _pdbx_nmr_refine.entry_id 2L5K _pdbx_nmr_refine.method 'simulated annealing, bioplymer chain elasticity' _pdbx_nmr_refine.details ;100 structures were calculated with DYANA and the 20 structures with the smallest residual target function have been refined by energy minimization with AMBER before being deposited., A model with the NMR-defined torsion angles was constructed with the BCE method and AMBER energy refined. It contains 2 bridging water molecules (coordinates available upon request to J. Cognet). ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Braun and Wuthrich' refinement DYANA 1.5 1 Guntert processing PROSA 6.0.2 2 'Bartels et al.' 'chemical shift assignment' XEASY 1.2 3 'Bartels et al.' 'peak picking' XEASY 1.2 4 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 1998 5 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm' 'geometry optimization' Amber 8 6 '(SMOL) Pakleza, Santini, Cognet' 'structure solution' Smol 1 7 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A N68 -1 ? A N68 1 2 1 Y 1 A DG 0 ? A DG 2 3 1 Y 1 A DG 24 ? A DG 26 4 1 Y 1 A DT 25 ? A DT 27 5 2 Y 1 A N68 -1 ? A N68 1 6 2 Y 1 A DG 0 ? A DG 2 7 2 Y 1 A DG 24 ? A DG 26 8 2 Y 1 A DT 25 ? A DT 27 9 3 Y 1 A N68 -1 ? A N68 1 10 3 Y 1 A DG 0 ? A DG 2 11 3 Y 1 A DG 24 ? A DG 26 12 3 Y 1 A DT 25 ? A DT 27 13 4 Y 1 A N68 -1 ? A N68 1 14 4 Y 1 A DG 0 ? A DG 2 15 4 Y 1 A DG 24 ? A DG 26 16 4 Y 1 A DT 25 ? A DT 27 17 5 Y 1 A N68 -1 ? A N68 1 18 5 Y 1 A DG 0 ? A DG 2 19 5 Y 1 A DG 24 ? A DG 26 20 5 Y 1 A DT 25 ? A DT 27 21 6 Y 1 A N68 -1 ? A N68 1 22 6 Y 1 A DG 0 ? A DG 2 23 6 Y 1 A DG 24 ? A DG 26 24 6 Y 1 A DT 25 ? A DT 27 25 7 Y 1 A N68 -1 ? A N68 1 26 7 Y 1 A DG 0 ? A DG 2 27 7 Y 1 A DG 24 ? A DG 26 28 7 Y 1 A DT 25 ? A DT 27 29 8 Y 1 A N68 -1 ? A N68 1 30 8 Y 1 A DG 0 ? A DG 2 31 8 Y 1 A DG 24 ? A DG 26 32 8 Y 1 A DT 25 ? A DT 27 33 9 Y 1 A N68 -1 ? A N68 1 34 9 Y 1 A DG 0 ? A DG 2 35 9 Y 1 A DG 24 ? A DG 26 36 9 Y 1 A DT 25 ? A DT 27 37 10 Y 1 A N68 -1 ? A N68 1 38 10 Y 1 A DG 0 ? A DG 2 39 10 Y 1 A DG 24 ? A DG 26 40 10 Y 1 A DT 25 ? A DT 27 41 11 Y 1 A N68 -1 ? A N68 1 42 11 Y 1 A DG 0 ? A DG 2 43 11 Y 1 A DG 24 ? A DG 26 44 11 Y 1 A DT 25 ? A DT 27 45 12 Y 1 A N68 -1 ? A N68 1 46 12 Y 1 A DG 0 ? A DG 2 47 12 Y 1 A DG 24 ? A DG 26 48 12 Y 1 A DT 25 ? A DT 27 49 13 Y 1 A N68 -1 ? A N68 1 50 13 Y 1 A DG 0 ? A DG 2 51 13 Y 1 A DG 24 ? A DG 26 52 13 Y 1 A DT 25 ? A DT 27 53 14 Y 1 A N68 -1 ? A N68 1 54 14 Y 1 A DG 0 ? A DG 2 55 14 Y 1 A DG 24 ? A DG 26 56 14 Y 1 A DT 25 ? A DT 27 57 15 Y 1 A N68 -1 ? A N68 1 58 15 Y 1 A DG 0 ? A DG 2 59 15 Y 1 A DG 24 ? A DG 26 60 15 Y 1 A DT 25 ? A DT 27 61 16 Y 1 A N68 -1 ? A N68 1 62 16 Y 1 A DG 0 ? A DG 2 63 16 Y 1 A DG 24 ? A DG 26 64 16 Y 1 A DT 25 ? A DT 27 65 17 Y 1 A N68 -1 ? A N68 1 66 17 Y 1 A DG 0 ? A DG 2 67 17 Y 1 A DG 24 ? A DG 26 68 17 Y 1 A DT 25 ? A DT 27 69 18 Y 1 A N68 -1 ? A N68 1 70 18 Y 1 A DG 0 ? A DG 2 71 18 Y 1 A DG 24 ? A DG 26 72 18 Y 1 A DT 25 ? A DT 27 73 19 Y 1 A N68 -1 ? A N68 1 74 19 Y 1 A DG 0 ? A DG 2 75 19 Y 1 A DG 24 ? A DG 26 76 19 Y 1 A DT 25 ? A DT 27 77 20 Y 1 A N68 -1 ? A N68 1 78 20 Y 1 A DG 0 ? A DG 2 79 20 Y 1 A DG 24 ? A DG 26 80 20 Y 1 A DT 25 ? A DT 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 N68 N1 N N N 144 N68 C1 C N N 145 N68 C2 C N N 146 N68 C3 C N N 147 N68 C4 C N N 148 N68 C5 C N N 149 N68 C6 C N N 150 N68 O O N N 151 N68 P P N N 152 N68 OP1 O N N 153 N68 OP2 O N N 154 N68 OP3 O N N 155 N68 HN11 H N N 156 N68 HN12 H N N 157 N68 H11 H N N 158 N68 H12 H N N 159 N68 H21 H N N 160 N68 H22 H N N 161 N68 H31 H N N 162 N68 H32 H N N 163 N68 H41 H N N 164 N68 H42 H N N 165 N68 H51 H N N 166 N68 H52 H N N 167 N68 H61 H N N 168 N68 H62 H N N 169 N68 HN21 H N N 170 N68 HN22 H N N 171 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 N68 N1 C1 sing N N 150 N68 C1 C2 sing N N 151 N68 C2 C3 sing N N 152 N68 C3 C4 sing N N 153 N68 C4 C5 sing N N 154 N68 C5 C6 sing N N 155 N68 C6 O sing N N 156 N68 O P sing N N 157 N68 P OP1 sing N N 158 N68 P OP2 sing N N 159 N68 P OP3 doub N N 160 N68 N1 HN11 sing N N 161 N68 N1 HN12 sing N N 162 N68 C1 H11 sing N N 163 N68 C1 H12 sing N N 164 N68 C2 H21 sing N N 165 N68 C2 H22 sing N N 166 N68 C3 H31 sing N N 167 N68 C3 H32 sing N N 168 N68 C4 H41 sing N N 169 N68 C4 H42 sing N N 170 N68 C5 H51 sing N N 171 N68 C5 H52 sing N N 172 N68 C6 H61 sing N N 173 N68 C6 H62 sing N N 174 N68 OP1 HN21 sing N N 175 N68 OP2 HN22 sing N N 176 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2L5K 'double helix' 2L5K 'b-form double helix' 2L5K 'hairpin loop' 2L5K 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 3 1_555 A DG 25 1_555 -0.129 0.095 0.056 10.247 -3.869 -2.970 1 A_DC1:DG23_A A 1 ? A 23 ? 19 1 1 A DA 4 1_555 A DT 24 1_555 -0.107 0.104 0.380 25.909 -7.503 -1.033 2 A_DA2:DT22_A A 2 ? A 22 ? 20 1 1 A DG 5 1_555 A DC 23 1_555 -0.849 -0.075 0.399 28.209 -8.077 -0.929 3 A_DG3:DC21_A A 3 ? A 21 ? 19 1 1 A DT 6 1_555 A DC 22 1_555 -2.208 -1.469 2.293 -0.550 10.678 -31.014 4 A_DT4:DC20_A A 4 ? A 20 ? ? ? 1 A DG 8 1_555 A DA 20 1_555 0.404 1.657 0.214 24.637 -10.135 -18.877 5 A_DG6:DA18_A A 6 ? A 18 ? 8 1 1 A DA 9 1_555 A DT 19 1_555 0.062 0.104 0.492 22.400 -21.497 -3.994 6 A_DA7:DT17_A A 7 ? A 17 ? 20 1 1 A DT 10 1_555 A DA 18 1_555 -0.185 -0.012 -0.455 3.032 -29.151 0.746 7 A_DT8:DA16_A A 8 ? A 16 ? 20 1 1 A DC 11 1_555 A DG 17 1_555 0.192 0.003 0.161 -14.575 -12.236 -3.610 8 A_DC9:DG15_A A 9 ? A 15 ? 19 1 1 A DC 12 1_555 A DG 16 1_555 -0.016 0.068 0.563 -9.007 5.714 -1.109 9 A_DC10:DG14_A A 10 ? A 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 3 1_555 A DG 25 1_555 A DA 4 1_555 A DT 24 1_555 -1.213 0.247 2.913 -3.903 5.538 31.622 -0.458 1.544 3.036 10.019 7.062 32.321 1 AA_DC1DA2:DT22DG23_AA A 1 ? A 23 ? A 2 ? A 22 ? 1 A DA 4 1_555 A DT 24 1_555 A DG 5 1_555 A DC 23 1_555 -0.538 -0.349 3.139 -3.272 7.828 32.466 -1.835 0.418 3.014 13.710 5.731 33.527 2 AA_DA2DG3:DC21DT22_AA A 2 ? A 22 ? A 3 ? A 21 ? 1 A DG 5 1_555 A DC 23 1_555 A DT 6 1_555 A DC 22 1_555 -2.013 -1.344 4.875 -14.310 19.935 32.224 -5.375 0.463 3.976 30.939 22.209 40.306 3 AA_DG3DT4:DC20DC21_AA A 3 ? A 21 ? A 4 ? A 20 ? 1 A DT 6 1_555 A DC 22 1_555 A DG 8 1_555 A DA 20 1_555 1.301 -1.207 6.416 14.417 12.129 68.123 -1.894 -0.122 6.288 10.623 -12.627 70.377 4 AA_DT4DG6:DA18DC20_AA A 4 ? A 20 ? A 6 ? A 18 ? 1 A DG 8 1_555 A DA 20 1_555 A DA 9 1_555 A DT 19 1_555 1.382 -0.959 3.045 -2.906 0.907 36.279 -1.650 -2.580 2.905 1.454 4.657 36.402 5 AA_DG6DA7:DT17DA18_AA A 6 ? A 18 ? A 7 ? A 17 ? 1 A DA 9 1_555 A DT 19 1_555 A DT 10 1_555 A DA 18 1_555 -0.158 -1.541 3.609 2.878 1.851 34.758 -2.872 0.738 3.501 3.090 -4.803 34.921 6 AA_DA7DT8:DA16DT17_AA A 7 ? A 17 ? A 8 ? A 16 ? 1 A DT 10 1_555 A DA 18 1_555 A DC 11 1_555 A DG 17 1_555 -0.025 -0.297 3.671 -4.445 12.735 36.252 -2.196 -0.572 3.364 19.650 6.858 38.601 7 AA_DT8DC9:DG15DA16_AA A 8 ? A 16 ? A 9 ? A 15 ? 1 A DC 11 1_555 A DG 17 1_555 A DC 12 1_555 A DG 16 1_555 0.218 -0.156 3.317 -3.592 10.012 29.200 -2.225 -1.101 3.051 19.079 6.845 31.038 8 AA_DC9DC10:DG14DG15_AA A 9 ? A 15 ? A 10 ? A 14 ? # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian UNITYPLUS 1 'Varian UnityPlus' 500 Bruker AVANCE 2 'Bruker Avance' # _atom_sites.entry_id 2L5K _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_