HEADER SIGNALING PROTEIN 04-NOV-10 2L5S TITLE SOLUTION STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE TGF-BETA TYPE I TITLE 2 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TGF-BETA RECEPTOR TYPE-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TGFR-1, ACTIVIN RECEPTOR-LIKE KINASE 5, ALK-5, COMPND 5 SERINE/THREONINE-PROTEIN KINASE RECEPTOR R4, SKR4; COMPND 6 EC: 2.7.11.30; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TGFBR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ALK5, TRANSFORMING GROWTH FACTOR BETA, TYPE I RECEPTOR, SIGNALING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR J.E.ZUNIGA,U.ILANGOVAN,M.PARDEEP,C.HINCK,T.HUANG REVDAT 1 26-OCT-11 2L5S 0 JRNL AUTH J.E.ZUNIGA,U.ILANGOVAN,P.MAHLAWAT,C.S.HINCK,T.HUANG, JRNL AUTH 2 J.C.GROPPE,D.G.MCEWEN,A.P.HINCK JRNL TITL THE TBETAR-I PRE-HELIX EXTENSION IS STRUCTURALLY ORDERED IN JRNL TITL 2 THE UNBOUND FORM AND ITS FLANKING PROLINES ARE ESSENTIAL FOR JRNL TITL 3 BINDING JRNL REF J.MOL.BIOL. V. 412 601 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21821041 JRNL DOI 10.1016/J.JMB.2011.07.046 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-10. REMARK 100 THE RCSB ID CODE IS RCSB101992. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 0.025 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 TBRI-1, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB2 SER A 66 HB VAL A 91 1.31 REMARK 500 HG1 THR A 26 O ILE A 48 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 -156.62 63.51 REMARK 500 1 ALA A 7 -62.39 72.16 REMARK 500 1 THR A 18 -92.61 50.45 REMARK 500 1 ASN A 21 17.46 55.46 REMARK 500 1 LEU A 29 -172.52 -171.79 REMARK 500 1 ARG A 58 107.04 -160.38 REMARK 500 1 PRO A 59 100.19 -50.62 REMARK 500 1 ALA A 63 69.88 -156.72 REMARK 500 1 THR A 68 -38.02 -162.18 REMARK 500 1 SER A 70 -28.61 77.65 REMARK 500 1 ASN A 83 -73.89 -48.93 REMARK 500 1 ILE A 85 21.58 -142.80 REMARK 500 1 GLU A 86 -157.56 -84.15 REMARK 500 1 LEU A 87 123.86 -38.60 REMARK 500 2 THR A 8 -63.95 -148.00 REMARK 500 2 THR A 18 -82.51 54.38 REMARK 500 2 THR A 23 -169.46 -165.98 REMARK 500 2 SER A 45 135.07 -176.21 REMARK 500 2 ARG A 58 89.37 -160.81 REMARK 500 2 ALA A 63 64.08 -169.11 REMARK 500 2 PRO A 64 35.45 -92.89 REMARK 500 2 SER A 65 110.23 63.09 REMARK 500 2 SER A 70 119.07 -161.58 REMARK 500 2 VAL A 71 73.56 46.81 REMARK 500 2 LYS A 84 -152.73 -167.03 REMARK 500 2 GLU A 86 130.34 -171.53 REMARK 500 3 ALA A 7 -55.51 71.44 REMARK 500 3 ALA A 9 84.84 64.62 REMARK 500 3 THR A 18 -91.57 52.38 REMARK 500 3 LEU A 29 -174.44 -173.08 REMARK 500 3 ARG A 58 95.36 -162.85 REMARK 500 3 ALA A 63 64.35 -158.28 REMARK 500 3 PRO A 64 170.21 -56.34 REMARK 500 3 SER A 65 48.43 -77.28 REMARK 500 3 SER A 70 77.36 47.00 REMARK 500 3 THR A 89 77.93 62.65 REMARK 500 4 THR A 8 -56.74 -149.15 REMARK 500 4 THR A 18 -94.12 51.52 REMARK 500 4 ASN A 21 8.25 117.95 REMARK 500 4 ARG A 58 107.30 -161.10 REMARK 500 4 PRO A 59 105.68 -53.29 REMARK 500 4 ALA A 63 68.84 -178.33 REMARK 500 4 LYS A 67 -73.75 -86.49 REMARK 500 4 SER A 70 -64.39 -157.08 REMARK 500 4 CYS A 82 45.94 -88.38 REMARK 500 5 ALA A 9 84.51 68.12 REMARK 500 5 THR A 18 -74.99 -122.99 REMARK 500 5 LEU A 29 -176.91 -170.39 REMARK 500 5 LYS A 40 -174.28 173.50 REMARK 500 5 PRO A 59 108.33 -57.54 REMARK 500 REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17276 RELATED DB: BMRB DBREF 2L5S A 7 91 UNP P36897 TGFR1_HUMAN 31 115 SEQADV 2L5S GLY A 5 UNP P36897 EXPRESSION TAG SEQADV 2L5S SER A 6 UNP P36897 EXPRESSION TAG SEQADV 2L5S NH2 A 92 UNP P36897 AMIDATION SEQRES 1 A 88 GLY SER ALA THR ALA LEU GLN CYS PHE CYS HIS LEU CYS SEQRES 2 A 88 THR LYS ASP ASN PHE THR CYS VAL THR ASP GLY LEU CYS SEQRES 3 A 88 PHE VAL SER VAL THR GLU THR THR ASP LYS VAL ILE HIS SEQRES 4 A 88 ASN SER MET CYS ILE ALA GLU ILE ASP LEU ILE PRO ARG SEQRES 5 A 88 ASP ARG PRO PHE VAL CYS ALA PRO SER SER LYS THR GLY SEQRES 6 A 88 SER VAL THR THR THR TYR CYS CYS ASN GLN ASP HIS CYS SEQRES 7 A 88 ASN LYS ILE GLU LEU PRO THR THR VAL NH2 HET NH2 A 92 2 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 1 ALA A 49 LEU A 53 5 5 HELIX 2 2 PRO A 59 ALA A 63 5 5 HELIX 3 3 CYS A 82 GLU A 86 5 5 SHEET 1 A 2 LEU A 10 PHE A 13 0 SHEET 2 A 2 THR A 23 THR A 26 -1 O THR A 26 N LEU A 10 SHEET 1 B 3 VAL A 41 ILE A 48 0 SHEET 2 B 3 LEU A 29 GLU A 36 -1 N THR A 35 O ILE A 42 SHEET 3 B 3 THR A 72 CYS A 77 -1 O CYS A 77 N CYS A 30 SSBOND 1 CYS A 12 CYS A 30 1555 1555 2.03 SSBOND 2 CYS A 14 CYS A 17 1555 1555 2.03 SSBOND 3 CYS A 24 CYS A 47 1555 1555 2.02 SSBOND 4 CYS A 62 CYS A 76 1555 1555 2.03 SSBOND 5 CYS A 77 CYS A 82 1555 1555 2.03 LINK C VAL A 91 N NH2 A 92 1555 1555 1.33 CISPEP 1 ILE A 54 PRO A 55 1 -5.42 CISPEP 2 ILE A 54 PRO A 55 2 -4.50 CISPEP 3 ILE A 54 PRO A 55 3 -2.63 CISPEP 4 ILE A 54 PRO A 55 4 -4.82 CISPEP 5 ILE A 54 PRO A 55 5 -8.49 CISPEP 6 ILE A 54 PRO A 55 6 -5.71 CISPEP 7 ILE A 54 PRO A 55 7 -7.86 CISPEP 8 ILE A 54 PRO A 55 8 -3.15 CISPEP 9 ILE A 54 PRO A 55 9 -8.70 CISPEP 10 ILE A 54 PRO A 55 10 -6.17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1