data_2L6E # _entry.id 2L6E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L6E pdb_00002l6e 10.2210/pdb2l6e/pdb RCSB RCSB102014 ? ? WWPDB D_1000102014 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2010-12-29 _pdbx_database_PDB_obs_spr.pdb_id 2L6E _pdbx_database_PDB_obs_spr.replace_pdb_id 2K1C _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L6E _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-11-18 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bhattacharya, S.' 1 'Zhang, H.' 2 'Debnath, A.K.' 3 'Cowburn, D.' 4 # _citation.id primary _citation.title 'Solution structure of a hydrocarbon stapled peptide inhibitor in complex with monomeric C-terminal domain of HIV-1 capsid.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 16274 _citation.page_last 16278 _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18417468 _citation.pdbx_database_id_DOI 10.1074/jbc.C800048200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhattacharya, S.' 1 ? primary 'Zhang, H.' 2 ? primary 'Debnath, A.K.' 3 ? primary 'Cowburn, D.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid protein p24' 11488.063 1 ? 'W80A, M81A' 'unp residues 280-363' ? 2 polymer syn 'NYAD-13 stapled peptide inhibitor' 1746.160 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALG PAATLEEMMTACQGVGGPGHKARVL ; ;MGSSHHHHHHSSGLVPRGSHMTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALG PAATLEEMMTACQGVGGPGHKARVL ; A ? 2 'polypeptide(L)' no yes 'ITF(MK8)DLL(MK8)YYGKKK' ITFLDLLLYYGKKK B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 THR n 1 23 SER n 1 24 ILE n 1 25 LEU n 1 26 ASP n 1 27 ILE n 1 28 ARG n 1 29 GLN n 1 30 GLY n 1 31 PRO n 1 32 LYS n 1 33 GLU n 1 34 PRO n 1 35 PHE n 1 36 ARG n 1 37 ASP n 1 38 TYR n 1 39 VAL n 1 40 ASP n 1 41 ARG n 1 42 PHE n 1 43 TYR n 1 44 LYS n 1 45 THR n 1 46 LEU n 1 47 ARG n 1 48 ALA n 1 49 GLU n 1 50 GLN n 1 51 ALA n 1 52 SER n 1 53 GLN n 1 54 GLU n 1 55 VAL n 1 56 LYS n 1 57 ASN n 1 58 ALA n 1 59 ALA n 1 60 THR n 1 61 GLU n 1 62 THR n 1 63 LEU n 1 64 LEU n 1 65 VAL n 1 66 GLN n 1 67 ASN n 1 68 ALA n 1 69 ASN n 1 70 PRO n 1 71 ASP n 1 72 CYS n 1 73 LYS n 1 74 THR n 1 75 ILE n 1 76 LEU n 1 77 LYS n 1 78 ALA n 1 79 LEU n 1 80 GLY n 1 81 PRO n 1 82 ALA n 1 83 ALA n 1 84 THR n 1 85 LEU n 1 86 GLU n 1 87 GLU n 1 88 MET n 1 89 MET n 1 90 THR n 1 91 ALA n 1 92 CYS n 1 93 GLN n 1 94 GLY n 1 95 VAL n 1 96 GLY n 1 97 GLY n 1 98 PRO n 1 99 GLY n 1 100 HIS n 1 101 LYS n 1 102 ALA n 1 103 ARG n 1 104 VAL n 1 105 LEU n 2 1 ILE n 2 2 THR n 2 3 PHE n 2 4 MK8 n 2 5 ASP n 2 6 LEU n 2 7 LEU n 2 8 MK8 n 2 9 TYR n 2 10 TYR n 2 11 GLY n 2 12 LYS n 2 13 LYS n 2 14 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector pET14b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POL_HV1Y2 P35963 1 ;TSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNRMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHK ARVL ; 280 ? 2 PDB 2L6E 2L6E 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2L6E A 22 ? 105 ? P35963 280 ? 363 ? 148 231 2 2 2L6E B 1 ? 14 ? 2L6E 1 ? 14 ? 1 14 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2L6E MET A 1 ? UNP P35963 ? ? 'initiating methionine' 127 1 1 2L6E GLY A 2 ? UNP P35963 ? ? 'expression tag' 128 2 1 2L6E SER A 3 ? UNP P35963 ? ? 'expression tag' 129 3 1 2L6E SER A 4 ? UNP P35963 ? ? 'expression tag' 130 4 1 2L6E HIS A 5 ? UNP P35963 ? ? 'expression tag' 131 5 1 2L6E HIS A 6 ? UNP P35963 ? ? 'expression tag' 132 6 1 2L6E HIS A 7 ? UNP P35963 ? ? 'expression tag' 133 7 1 2L6E HIS A 8 ? UNP P35963 ? ? 'expression tag' 134 8 1 2L6E HIS A 9 ? UNP P35963 ? ? 'expression tag' 135 9 1 2L6E HIS A 10 ? UNP P35963 ? ? 'expression tag' 136 10 1 2L6E SER A 11 ? UNP P35963 ? ? 'expression tag' 137 11 1 2L6E SER A 12 ? UNP P35963 ? ? 'expression tag' 138 12 1 2L6E GLY A 13 ? UNP P35963 ? ? 'expression tag' 139 13 1 2L6E LEU A 14 ? UNP P35963 ? ? 'expression tag' 140 14 1 2L6E VAL A 15 ? UNP P35963 ? ? 'expression tag' 141 15 1 2L6E PRO A 16 ? UNP P35963 ? ? 'expression tag' 142 16 1 2L6E ARG A 17 ? UNP P35963 ? ? 'expression tag' 143 17 1 2L6E GLY A 18 ? UNP P35963 ? ? 'expression tag' 144 18 1 2L6E SER A 19 ? UNP P35963 ? ? 'expression tag' 145 19 1 2L6E HIS A 20 ? UNP P35963 ? ? 'expression tag' 146 20 1 2L6E MET A 21 ? UNP P35963 ? ? 'expression tag' 147 21 1 2L6E ALA A 58 ? UNP P35963 TRP 316 'engineered mutation' 184 22 1 2L6E ALA A 59 ? UNP P35963 MET 317 'engineered mutation' 185 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MK8 'L-peptide linking' n 2-methyl-L-norleucine ? 'C7 H15 N O2' 145.199 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D HNCO' 1 4 1 '3D HNCA' 1 5 1 '3D HN(CO)CA' 1 6 1 '3D HNCACB' 1 7 1 '3D CBCA(CO)NH' 1 8 1 '3D 1H-15N NOESY' 1 9 2 '3D 1H-13C NOESY' 1 10 1 '2D f1,f2 filtered 1H-1H NOESY' 1 11 1 '2D f2 filtered 1H-1H NOESY' 1 12 1 '3D H(CCO)NH' 1 13 1 '3D HCCH-TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;600 uM [U-100% 13C; U-100% 15N] Capsid protein p24, 900 uM NYAD-13 Peptide Inhibitor, 2 mM DTT, 100 mM ammonium acetate, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' '600 uM [U-100% 13C; U-100% 15N] Capsid protein p24, 900 uM NYAD-13 Peptide Inhibitor, 2 mM DTT, 100 mM ammonium acetate, 100% D2O' 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker AVANCE 1 'Bruker Avance' 900 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2L6E _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'water refinement' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L6E _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L6E _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 1 ;Linge, O'Donoghue and Nilges ; refinement ARIA 2.2 2 'Keller, Wuthrich' 'chemical shift assignment' CARA 1.5 3 'Keller, Wuthrich' 'peak picking' CARA 1.5 4 'Bruker Biospin' processing TopSpin 1.3 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2L6E _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L6E _struct.title 'NMR Structure of the monomeric mutant C-terminal domain of HIV-1 Capsid in complex with stapled peptide Inhibitor' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L6E _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/INHIBITOR' _struct_keywords.text 'Protein-stapled peptide complex, VIRAL PROTEIN - PEPTIDE INHIBITOR complex, VIRAL PROTEIN-INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 23 ? ILE A 27 ? SER A 149 ILE A 153 5 ? 5 HELX_P HELX_P2 2 PRO A 34 ? ALA A 48 ? PRO A 160 ALA A 174 1 ? 15 HELX_P HELX_P3 3 SER A 52 ? ASN A 67 ? SER A 178 ASN A 193 1 ? 16 HELX_P HELX_P4 4 ASN A 69 ? GLY A 80 ? ASN A 195 GLY A 206 1 ? 12 HELX_P HELX_P5 5 THR A 84 ? CYS A 92 ? THR A 210 CYS A 218 1 ? 9 HELX_P HELX_P6 6 THR B 2 ? LYS B 12 ? THR B 2 LYS B 12 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B PHE 3 C ? ? ? 1_555 B MK8 4 N ? ? B PHE 3 B MK8 4 1_555 ? ? ? ? ? ? ? 1.337 sing ? covale2 covale both ? B MK8 4 C ? ? ? 1_555 B ASP 5 N ? ? B MK8 4 B ASP 5 1_555 ? ? ? ? ? ? ? 1.336 sing ? covale3 covale none ? B MK8 4 CE ? ? ? 1_555 B MK8 8 CE ? ? B MK8 4 B MK8 8 1_555 ? ? ? ? ? ? ? 1.389 sing ? covale4 covale both ? B LEU 7 C ? ? ? 1_555 B MK8 8 N ? ? B LEU 7 B MK8 8 1_555 ? ? ? ? ? ? ? 1.340 sing ? covale5 covale both ? B MK8 8 C ? ? ? 1_555 B TYR 9 N ? ? B MK8 8 B TYR 9 1_555 ? ? ? ? ? ? ? 1.322 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR CHAIN B OF NYAD-13 STAPLED PEPTIDE INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 VAL A 39 ? VAL A 165 . ? 1_555 ? 2 AC1 13 ASP A 40 ? ASP A 166 . ? 1_555 ? 3 AC1 13 TYR A 43 ? TYR A 169 . ? 1_555 ? 4 AC1 13 LEU A 46 ? LEU A 172 . ? 1_555 ? 5 AC1 13 ARG A 47 ? ARG A 173 . ? 1_555 ? 6 AC1 13 ASN A 57 ? ASN A 183 . ? 1_555 ? 7 AC1 13 THR A 60 ? THR A 186 . ? 1_555 ? 8 AC1 13 GLU A 61 ? GLU A 187 . ? 1_555 ? 9 AC1 13 ALA A 83 ? ALA A 209 . ? 1_555 ? 10 AC1 13 THR A 84 ? THR A 210 . ? 1_555 ? 11 AC1 13 LEU A 85 ? LEU A 211 . ? 1_555 ? 12 AC1 13 GLU A 86 ? GLU A 212 . ? 1_555 ? 13 AC1 13 MET A 89 ? MET A 215 . ? 1_555 ? # _atom_sites.entry_id 2L6E _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 127 ? ? ? A . n A 1 2 GLY 2 128 ? ? ? A . n A 1 3 SER 3 129 ? ? ? A . n A 1 4 SER 4 130 ? ? ? A . n A 1 5 HIS 5 131 ? ? ? A . n A 1 6 HIS 6 132 ? ? ? A . n A 1 7 HIS 7 133 ? ? ? A . n A 1 8 HIS 8 134 ? ? ? A . n A 1 9 HIS 9 135 ? ? ? A . n A 1 10 HIS 10 136 ? ? ? A . n A 1 11 SER 11 137 ? ? ? A . n A 1 12 SER 12 138 138 SER SER A . n A 1 13 GLY 13 139 139 GLY GLY A . n A 1 14 LEU 14 140 140 LEU LEU A . n A 1 15 VAL 15 141 141 VAL VAL A . n A 1 16 PRO 16 142 142 PRO PRO A . n A 1 17 ARG 17 143 143 ARG ARG A . n A 1 18 GLY 18 144 144 GLY GLY A . n A 1 19 SER 19 145 145 SER SER A . n A 1 20 HIS 20 146 146 HIS HIS A . n A 1 21 MET 21 147 147 MET MET A . n A 1 22 THR 22 148 148 THR THR A . n A 1 23 SER 23 149 149 SER SER A . n A 1 24 ILE 24 150 150 ILE ILE A . n A 1 25 LEU 25 151 151 LEU LEU A . n A 1 26 ASP 26 152 152 ASP ASP A . n A 1 27 ILE 27 153 153 ILE ILE A . n A 1 28 ARG 28 154 154 ARG ARG A . n A 1 29 GLN 29 155 155 GLN GLN A . n A 1 30 GLY 30 156 156 GLY GLY A . n A 1 31 PRO 31 157 157 PRO PRO A . n A 1 32 LYS 32 158 158 LYS LYS A . n A 1 33 GLU 33 159 159 GLU GLU A . n A 1 34 PRO 34 160 160 PRO PRO A . n A 1 35 PHE 35 161 161 PHE PHE A . n A 1 36 ARG 36 162 162 ARG ARG A . n A 1 37 ASP 37 163 163 ASP ASP A . n A 1 38 TYR 38 164 164 TYR TYR A . n A 1 39 VAL 39 165 165 VAL VAL A . n A 1 40 ASP 40 166 166 ASP ASP A . n A 1 41 ARG 41 167 167 ARG ARG A . n A 1 42 PHE 42 168 168 PHE PHE A . n A 1 43 TYR 43 169 169 TYR TYR A . n A 1 44 LYS 44 170 170 LYS LYS A . n A 1 45 THR 45 171 171 THR THR A . n A 1 46 LEU 46 172 172 LEU LEU A . n A 1 47 ARG 47 173 173 ARG ARG A . n A 1 48 ALA 48 174 174 ALA ALA A . n A 1 49 GLU 49 175 175 GLU GLU A . n A 1 50 GLN 50 176 176 GLN GLN A . n A 1 51 ALA 51 177 177 ALA ALA A . n A 1 52 SER 52 178 178 SER SER A . n A 1 53 GLN 53 179 179 GLN GLN A . n A 1 54 GLU 54 180 180 GLU GLU A . n A 1 55 VAL 55 181 181 VAL VAL A . n A 1 56 LYS 56 182 182 LYS LYS A . n A 1 57 ASN 57 183 183 ASN ASN A . n A 1 58 ALA 58 184 184 ALA ALA A . n A 1 59 ALA 59 185 185 ALA ALA A . n A 1 60 THR 60 186 186 THR THR A . n A 1 61 GLU 61 187 187 GLU GLU A . n A 1 62 THR 62 188 188 THR THR A . n A 1 63 LEU 63 189 189 LEU LEU A . n A 1 64 LEU 64 190 190 LEU LEU A . n A 1 65 VAL 65 191 191 VAL VAL A . n A 1 66 GLN 66 192 192 GLN GLN A . n A 1 67 ASN 67 193 193 ASN ASN A . n A 1 68 ALA 68 194 194 ALA ALA A . n A 1 69 ASN 69 195 195 ASN ASN A . n A 1 70 PRO 70 196 196 PRO PRO A . n A 1 71 ASP 71 197 197 ASP ASP A . n A 1 72 CYS 72 198 198 CYS CYS A . n A 1 73 LYS 73 199 199 LYS LYS A . n A 1 74 THR 74 200 200 THR THR A . n A 1 75 ILE 75 201 201 ILE ILE A . n A 1 76 LEU 76 202 202 LEU LEU A . n A 1 77 LYS 77 203 203 LYS LYS A . n A 1 78 ALA 78 204 204 ALA ALA A . n A 1 79 LEU 79 205 205 LEU LEU A . n A 1 80 GLY 80 206 206 GLY GLY A . n A 1 81 PRO 81 207 207 PRO PRO A . n A 1 82 ALA 82 208 208 ALA ALA A . n A 1 83 ALA 83 209 209 ALA ALA A . n A 1 84 THR 84 210 210 THR THR A . n A 1 85 LEU 85 211 211 LEU LEU A . n A 1 86 GLU 86 212 212 GLU GLU A . n A 1 87 GLU 87 213 213 GLU GLU A . n A 1 88 MET 88 214 214 MET MET A . n A 1 89 MET 89 215 215 MET MET A . n A 1 90 THR 90 216 216 THR THR A . n A 1 91 ALA 91 217 217 ALA ALA A . n A 1 92 CYS 92 218 218 CYS CYS A . n A 1 93 GLN 93 219 219 GLN GLN A . n A 1 94 GLY 94 220 220 GLY GLY A . n A 1 95 VAL 95 221 221 VAL VAL A . n A 1 96 GLY 96 222 222 GLY GLY A . n A 1 97 GLY 97 223 223 GLY GLY A . n A 1 98 PRO 98 224 224 PRO PRO A . n A 1 99 GLY 99 225 225 GLY GLY A . n A 1 100 HIS 100 226 226 HIS HIS A . n A 1 101 LYS 101 227 227 LYS LYS A . n A 1 102 ALA 102 228 228 ALA ALA A . n A 1 103 ARG 103 229 229 ARG ARG A . n A 1 104 VAL 104 230 230 VAL VAL A . n A 1 105 LEU 105 231 231 LEU LEU A . n B 2 1 ILE 1 1 1 ILE ILE B . n B 2 2 THR 2 2 2 THR THR B . n B 2 3 PHE 3 3 3 PHE PHE B . n B 2 4 MK8 4 4 4 MK8 MK8 B . n B 2 5 ASP 5 5 5 ASP ASP B . n B 2 6 LEU 6 6 6 LEU LEU B . n B 2 7 LEU 7 7 7 LEU LEU B . n B 2 8 MK8 8 8 8 MK8 MK8 B . n B 2 9 TYR 9 9 9 TYR TYR B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 LYS 12 12 12 LYS LYS B . n B 2 13 LYS 13 13 13 LYS LYS B . n B 2 14 LYS 14 14 14 LYS LYS B . n # _pdbx_molecule_features.prd_id PRD_000966 _pdbx_molecule_features.name ;[(5S)-5-[[(2S)-6-azaniumyl-2-[[(2S)-6-azaniumyl-2-[2-[[(2S)-2-[[(2S)-2-[[(2S,5S,8S,11S,20S)-20-[[(2S)-2-[[(2S,3R)-2-[[(2S,3S)-2-azanyl-3-methyl-pentanoyl]amino]-3-oxidanyl-butanoyl]amino]-3-phenyl-propanoyl]amino]-2-(2-hydroxy-2-oxoethyl)-11,20-dimethyl-5,8-bis(2-methylpropyl)-3,6,9,21-tetrakis(oxidanylidene)-1,4,7,10-tetrazacyclohenicos-11-yl]carbonylamino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]ethanoylamino]hexanoyl]amino]hexanoyl]amino]-6-oxidanyl-6-oxidanylidene-hexyl]azanium ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000966 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B MK8 4 B MK8 4 ? LEU 2-METHYL-L-NORLEUCINE 2 B MK8 8 B MK8 8 ? LEU 2-METHYL-L-NORLEUCINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-12-12 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Other 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' pdbx_nmr_spectrometer 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_nmr_software.name' 6 4 'Structure model' '_pdbx_nmr_spectrometer.model' 7 4 'Structure model' '_struct_conn.pdbx_dist_value' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_entry_details.entry_id 2L6E _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE SIDE CHAINS OF MK8 RESIDUE OF CHAIN B AND NUMBERS 4 AND 8 ARE LINKED BY A DOUBLE BOND AT THE CE ATOMS.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Capsid protein p24-1' 600 ? uM '[U-100% 13C; U-100% 15N]' 1 'NYAD-13 Peptide Inhibitor-2' 900 ? uM ? 1 DTT-3 2 ? mM ? 1 'ammonium acetate-4' 100 ? mM ? 1 'Capsid protein p24-5' 600 ? uM '[U-100% 13C; U-100% 15N]' 2 'NYAD-13 Peptide Inhibitor-6' 900 ? uM ? 2 DTT-7 2 ? mM ? 2 'ammonium acetate-8' 100 ? mM ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE2 A GLU 159 ? ? HH12 A ARG 167 ? ? 1.31 2 2 HE2 A GLU 213 ? ? HH12 A ARG 229 ? ? 0.79 3 3 HE2 A GLU 159 ? ? HH22 A ARG 167 ? ? 0.76 4 3 HH21 A ARG 162 ? ? HD2 A ASP 163 ? ? 1.06 5 3 HH22 A ARG 143 ? ? HE2 A GLU 175 ? ? 1.30 6 4 HD2 A ASP 166 ? ? HZ3 A LYS 170 ? ? 0.85 7 5 HD2 A ASP 166 ? ? HZ3 A LYS 170 ? ? 0.93 8 5 O A SER 149 ? ? H A LEU 151 ? ? 1.60 9 6 HE2 A GLU 159 ? ? HE A ARG 167 ? ? 1.06 10 6 OE1 A GLU 175 ? ? HZ1 A LYS 182 ? ? 1.58 11 7 HE2 A GLU 159 ? ? HH21 A ARG 167 ? ? 0.65 12 8 HG1 A THR 210 ? ? HD2 B ASP 5 ? ? 0.82 13 8 HE2 A GLU 213 ? ? HH12 A ARG 229 ? ? 1.07 14 9 HG1 A THR 210 ? ? HD2 B ASP 5 ? ? 0.83 15 9 HE2 A GLU 213 ? ? HE2 A HIS 226 ? ? 0.92 16 11 H A HIS 146 ? ? HD2 A ASP 152 ? ? 1.29 17 11 HE1 A PHE 168 ? ? HG1 A THR 186 ? ? 1.30 18 13 H A SER 149 ? ? HD2 A ASP 152 ? ? 0.84 19 13 HE2 A GLU 159 ? ? HH12 A ARG 167 ? ? 1.21 20 13 OE1 A GLU 187 ? ? H3 B ILE 1 ? ? 1.59 21 14 HE2 A GLU 159 ? ? HH21 A ARG 167 ? ? 0.78 22 14 HE2 A GLU 187 ? ? H1 B ILE 1 ? ? 1.01 23 14 HG1 A THR 210 ? ? HD2 B ASP 5 ? ? 1.27 24 14 H A LEU 211 ? ? HD2 B ASP 5 ? ? 1.32 25 15 HE2 A GLU 159 ? ? HH21 A ARG 167 ? ? 0.99 26 15 H A LEU 211 ? ? HD2 B ASP 5 ? ? 1.16 27 17 HD2 A ASP 166 ? ? HZ3 A LYS 170 ? ? 1.04 28 17 HG1 A THR 210 ? ? HE2 A GLU 213 ? ? 1.10 29 17 HG1 A THR 210 ? ? OE2 A GLU 213 ? ? 1.58 30 17 H2 B ILE 1 ? ? OD2 B ASP 5 ? ? 1.60 31 18 HB2 A LEU 211 ? ? HD2 B ASP 5 ? ? 1.03 32 18 HG1 A THR 210 ? ? OE1 A GLU 213 ? ? 1.58 33 18 H1 B ILE 1 ? ? OD2 B ASP 5 ? ? 1.59 34 19 HE2 A GLU 159 ? ? HH22 A ARG 167 ? ? 1.33 35 19 H A LEU 211 ? ? HD2 B ASP 5 ? ? 1.35 36 20 H A SER 149 ? ? HE2 A GLU 175 ? ? 1.04 37 20 H A LEU 211 ? ? HD2 B ASP 5 ? ? 1.29 38 20 HA A ARG 167 ? ? HE2 A LYS 170 ? ? 1.31 39 20 HG1 A THR 148 ? ? HE2 A GLU 175 ? ? 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 147 ? ? -169.93 45.74 2 1 SER A 149 ? ? -164.33 40.89 3 1 LYS A 227 ? ? 61.83 88.76 4 1 LYS B 12 ? ? -125.30 -158.94 5 1 LYS B 13 ? ? -144.26 39.32 6 2 VAL A 141 ? ? 37.95 78.01 7 2 SER A 145 ? ? 62.84 -78.94 8 2 SER A 149 ? ? 53.11 82.56 9 2 PRO A 224 ? ? -54.06 96.54 10 2 THR B 2 ? ? 50.24 164.19 11 2 LYS B 12 ? ? -69.48 86.53 12 2 LYS B 13 ? ? 41.97 -153.99 13 3 SER A 145 ? ? 72.64 -166.81 14 3 HIS A 146 ? ? 68.65 -77.83 15 3 THR A 148 ? ? 45.70 -104.16 16 3 SER A 149 ? ? 56.22 81.85 17 4 ARG A 143 ? ? -148.04 22.42 18 4 SER A 145 ? ? -169.26 -18.48 19 4 PRO A 224 ? ? -78.21 42.43 20 4 HIS A 226 ? ? 63.93 -83.21 21 4 ALA A 228 ? ? 68.46 -66.47 22 4 LYS B 13 ? ? -113.29 -77.52 23 5 SER A 149 ? ? -118.90 57.35 24 5 ILE A 150 ? ? 57.80 -48.80 25 5 VAL A 221 ? ? -131.62 -68.05 26 5 VAL A 230 ? ? 79.19 111.08 27 5 THR B 2 ? ? -35.23 140.59 28 6 LEU A 140 ? ? -68.26 99.88 29 6 VAL A 141 ? ? 51.93 82.44 30 6 PRO A 142 ? ? -66.93 82.70 31 6 ARG A 143 ? ? -160.73 -59.98 32 6 MET A 147 ? ? -120.73 -87.70 33 6 PRO A 224 ? ? -39.60 112.42 34 6 ALA A 228 ? ? -128.40 -90.03 35 6 ARG A 229 ? ? -108.03 -81.44 36 7 LEU A 140 ? ? 56.75 85.03 37 7 THR A 148 ? ? -150.93 73.66 38 7 HIS A 226 ? ? 63.57 101.95 39 7 ALA A 228 ? ? -168.63 -165.41 40 7 ARG A 229 ? ? 71.40 66.50 41 8 LEU A 140 ? ? 60.16 95.19 42 8 HIS A 146 ? ? 67.97 153.42 43 8 MET A 147 ? ? 73.53 -37.87 44 8 PRO A 224 ? ? -89.04 31.64 45 8 HIS A 226 ? ? -120.02 -59.94 46 8 VAL A 230 ? ? 62.98 63.92 47 8 THR B 2 ? ? 44.67 163.70 48 8 LYS B 12 ? ? -143.94 -69.35 49 9 SER A 149 ? ? 178.77 -34.53 50 9 ILE A 150 ? ? 60.70 -32.76 51 10 VAL A 141 ? ? 67.12 97.70 52 10 ARG A 143 ? ? -101.43 62.31 53 10 HIS A 146 ? ? 74.98 -69.93 54 10 THR A 148 ? ? -165.90 30.15 55 10 LYS B 12 ? ? 39.93 72.71 56 11 LEU A 140 ? ? -145.16 17.92 57 11 HIS A 146 ? ? 63.32 72.04 58 11 ALA A 228 ? ? 70.03 -58.61 59 11 VAL A 230 ? ? -177.89 9.16 60 11 LYS B 12 ? ? -61.35 93.58 61 12 MET A 147 ? ? -93.98 55.17 62 12 THR B 2 ? ? 54.83 170.73 63 13 SER A 145 ? ? 49.52 80.81 64 13 HIS A 146 ? ? 61.70 69.42 65 13 THR A 148 ? ? 63.52 72.05 66 13 SER A 149 ? ? -146.91 22.65 67 13 ILE A 150 ? ? 63.42 -30.39 68 13 VAL A 221 ? ? -85.55 -77.58 69 13 HIS A 226 ? ? -96.78 -60.44 70 13 LYS A 227 ? ? 55.49 93.20 71 13 ALA A 228 ? ? -54.70 106.23 72 13 VAL A 230 ? ? -170.05 -38.27 73 14 ARG A 143 ? ? 76.09 86.39 74 14 THR A 148 ? ? -150.84 82.31 75 14 SER A 149 ? ? -158.27 77.67 76 14 ALA A 228 ? ? 67.21 157.85 77 14 THR B 2 ? ? 54.22 178.11 78 14 LYS B 13 ? ? 70.66 -46.48 79 15 SER A 145 ? ? -91.32 43.85 80 15 PRO A 224 ? ? -68.47 96.82 81 15 THR B 2 ? ? 48.23 162.65 82 16 LEU A 140 ? ? -123.69 -67.07 83 16 PRO A 142 ? ? -72.07 46.97 84 16 SER A 145 ? ? -113.48 -73.07 85 16 HIS A 146 ? ? 56.50 -147.77 86 16 MET A 147 ? ? 74.81 -60.91 87 16 SER A 149 ? ? -168.96 60.99 88 16 LYS A 227 ? ? 65.75 88.64 89 17 LEU A 140 ? ? 64.19 -176.47 90 17 VAL A 141 ? ? 35.66 69.85 91 17 LYS A 227 ? ? -118.04 72.94 92 18 HIS A 146 ? ? 64.87 60.35 93 18 ILE A 150 ? ? 75.02 -34.06 94 18 PRO A 224 ? ? -92.54 34.83 95 19 ILE A 150 ? ? 62.54 -15.18 96 19 GLN A 219 ? ? -88.48 -143.96 97 19 ALA A 228 ? ? 62.94 -177.70 98 19 THR B 2 ? ? 54.63 170.31 99 20 ARG A 143 ? ? 71.03 -26.15 100 20 THR A 148 ? ? -165.25 -167.88 101 20 SER A 149 ? ? 73.81 80.70 102 20 GLN A 219 ? ? -89.31 49.05 103 20 VAL A 221 ? ? -101.91 -68.53 104 20 LYS B 13 ? ? -163.29 38.49 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 127 ? A MET 1 2 1 Y 1 A GLY 128 ? A GLY 2 3 1 Y 1 A SER 129 ? A SER 3 4 1 Y 1 A SER 130 ? A SER 4 5 1 Y 1 A HIS 131 ? A HIS 5 6 1 Y 1 A HIS 132 ? A HIS 6 7 1 Y 1 A HIS 133 ? A HIS 7 8 1 Y 1 A HIS 134 ? A HIS 8 9 1 Y 1 A HIS 135 ? A HIS 9 10 1 Y 1 A HIS 136 ? A HIS 10 11 1 Y 1 A SER 137 ? A SER 11 12 2 Y 1 A MET 127 ? A MET 1 13 2 Y 1 A GLY 128 ? A GLY 2 14 2 Y 1 A SER 129 ? A SER 3 15 2 Y 1 A SER 130 ? A SER 4 16 2 Y 1 A HIS 131 ? A HIS 5 17 2 Y 1 A HIS 132 ? A HIS 6 18 2 Y 1 A HIS 133 ? A HIS 7 19 2 Y 1 A HIS 134 ? A HIS 8 20 2 Y 1 A HIS 135 ? A HIS 9 21 2 Y 1 A HIS 136 ? A HIS 10 22 2 Y 1 A SER 137 ? A SER 11 23 3 Y 1 A MET 127 ? A MET 1 24 3 Y 1 A GLY 128 ? A GLY 2 25 3 Y 1 A SER 129 ? A SER 3 26 3 Y 1 A SER 130 ? A SER 4 27 3 Y 1 A HIS 131 ? A HIS 5 28 3 Y 1 A HIS 132 ? A HIS 6 29 3 Y 1 A HIS 133 ? A HIS 7 30 3 Y 1 A HIS 134 ? A HIS 8 31 3 Y 1 A HIS 135 ? A HIS 9 32 3 Y 1 A HIS 136 ? A HIS 10 33 3 Y 1 A SER 137 ? A SER 11 34 4 Y 1 A MET 127 ? A MET 1 35 4 Y 1 A GLY 128 ? A GLY 2 36 4 Y 1 A SER 129 ? A SER 3 37 4 Y 1 A SER 130 ? A SER 4 38 4 Y 1 A HIS 131 ? A HIS 5 39 4 Y 1 A HIS 132 ? A HIS 6 40 4 Y 1 A HIS 133 ? A HIS 7 41 4 Y 1 A HIS 134 ? A HIS 8 42 4 Y 1 A HIS 135 ? A HIS 9 43 4 Y 1 A HIS 136 ? A HIS 10 44 4 Y 1 A SER 137 ? A SER 11 45 5 Y 1 A MET 127 ? A MET 1 46 5 Y 1 A GLY 128 ? A GLY 2 47 5 Y 1 A SER 129 ? A SER 3 48 5 Y 1 A SER 130 ? A SER 4 49 5 Y 1 A HIS 131 ? A HIS 5 50 5 Y 1 A HIS 132 ? A HIS 6 51 5 Y 1 A HIS 133 ? A HIS 7 52 5 Y 1 A HIS 134 ? A HIS 8 53 5 Y 1 A HIS 135 ? A HIS 9 54 5 Y 1 A HIS 136 ? A HIS 10 55 5 Y 1 A SER 137 ? A SER 11 56 6 Y 1 A MET 127 ? A MET 1 57 6 Y 1 A GLY 128 ? A GLY 2 58 6 Y 1 A SER 129 ? A SER 3 59 6 Y 1 A SER 130 ? A SER 4 60 6 Y 1 A HIS 131 ? A HIS 5 61 6 Y 1 A HIS 132 ? A HIS 6 62 6 Y 1 A HIS 133 ? A HIS 7 63 6 Y 1 A HIS 134 ? A HIS 8 64 6 Y 1 A HIS 135 ? A HIS 9 65 6 Y 1 A HIS 136 ? A HIS 10 66 6 Y 1 A SER 137 ? A SER 11 67 7 Y 1 A MET 127 ? A MET 1 68 7 Y 1 A GLY 128 ? A GLY 2 69 7 Y 1 A SER 129 ? A SER 3 70 7 Y 1 A SER 130 ? A SER 4 71 7 Y 1 A HIS 131 ? A HIS 5 72 7 Y 1 A HIS 132 ? A HIS 6 73 7 Y 1 A HIS 133 ? A HIS 7 74 7 Y 1 A HIS 134 ? A HIS 8 75 7 Y 1 A HIS 135 ? A HIS 9 76 7 Y 1 A HIS 136 ? A HIS 10 77 7 Y 1 A SER 137 ? A SER 11 78 8 Y 1 A MET 127 ? A MET 1 79 8 Y 1 A GLY 128 ? A GLY 2 80 8 Y 1 A SER 129 ? A SER 3 81 8 Y 1 A SER 130 ? A SER 4 82 8 Y 1 A HIS 131 ? A HIS 5 83 8 Y 1 A HIS 132 ? A HIS 6 84 8 Y 1 A HIS 133 ? A HIS 7 85 8 Y 1 A HIS 134 ? A HIS 8 86 8 Y 1 A HIS 135 ? A HIS 9 87 8 Y 1 A HIS 136 ? A HIS 10 88 8 Y 1 A SER 137 ? A SER 11 89 9 Y 1 A MET 127 ? A MET 1 90 9 Y 1 A GLY 128 ? A GLY 2 91 9 Y 1 A SER 129 ? A SER 3 92 9 Y 1 A SER 130 ? A SER 4 93 9 Y 1 A HIS 131 ? A HIS 5 94 9 Y 1 A HIS 132 ? A HIS 6 95 9 Y 1 A HIS 133 ? A HIS 7 96 9 Y 1 A HIS 134 ? A HIS 8 97 9 Y 1 A HIS 135 ? A HIS 9 98 9 Y 1 A HIS 136 ? A HIS 10 99 9 Y 1 A SER 137 ? A SER 11 100 10 Y 1 A MET 127 ? A MET 1 101 10 Y 1 A GLY 128 ? A GLY 2 102 10 Y 1 A SER 129 ? A SER 3 103 10 Y 1 A SER 130 ? A SER 4 104 10 Y 1 A HIS 131 ? A HIS 5 105 10 Y 1 A HIS 132 ? A HIS 6 106 10 Y 1 A HIS 133 ? A HIS 7 107 10 Y 1 A HIS 134 ? A HIS 8 108 10 Y 1 A HIS 135 ? A HIS 9 109 10 Y 1 A HIS 136 ? A HIS 10 110 10 Y 1 A SER 137 ? A SER 11 111 11 Y 1 A MET 127 ? A MET 1 112 11 Y 1 A GLY 128 ? A GLY 2 113 11 Y 1 A SER 129 ? A SER 3 114 11 Y 1 A SER 130 ? A SER 4 115 11 Y 1 A HIS 131 ? A HIS 5 116 11 Y 1 A HIS 132 ? A HIS 6 117 11 Y 1 A HIS 133 ? A HIS 7 118 11 Y 1 A HIS 134 ? A HIS 8 119 11 Y 1 A HIS 135 ? A HIS 9 120 11 Y 1 A HIS 136 ? A HIS 10 121 11 Y 1 A SER 137 ? A SER 11 122 12 Y 1 A MET 127 ? A MET 1 123 12 Y 1 A GLY 128 ? A GLY 2 124 12 Y 1 A SER 129 ? A SER 3 125 12 Y 1 A SER 130 ? A SER 4 126 12 Y 1 A HIS 131 ? A HIS 5 127 12 Y 1 A HIS 132 ? A HIS 6 128 12 Y 1 A HIS 133 ? A HIS 7 129 12 Y 1 A HIS 134 ? A HIS 8 130 12 Y 1 A HIS 135 ? A HIS 9 131 12 Y 1 A HIS 136 ? A HIS 10 132 12 Y 1 A SER 137 ? A SER 11 133 13 Y 1 A MET 127 ? A MET 1 134 13 Y 1 A GLY 128 ? A GLY 2 135 13 Y 1 A SER 129 ? A SER 3 136 13 Y 1 A SER 130 ? A SER 4 137 13 Y 1 A HIS 131 ? A HIS 5 138 13 Y 1 A HIS 132 ? A HIS 6 139 13 Y 1 A HIS 133 ? A HIS 7 140 13 Y 1 A HIS 134 ? A HIS 8 141 13 Y 1 A HIS 135 ? A HIS 9 142 13 Y 1 A HIS 136 ? A HIS 10 143 13 Y 1 A SER 137 ? A SER 11 144 14 Y 1 A MET 127 ? A MET 1 145 14 Y 1 A GLY 128 ? A GLY 2 146 14 Y 1 A SER 129 ? A SER 3 147 14 Y 1 A SER 130 ? A SER 4 148 14 Y 1 A HIS 131 ? A HIS 5 149 14 Y 1 A HIS 132 ? A HIS 6 150 14 Y 1 A HIS 133 ? A HIS 7 151 14 Y 1 A HIS 134 ? A HIS 8 152 14 Y 1 A HIS 135 ? A HIS 9 153 14 Y 1 A HIS 136 ? A HIS 10 154 14 Y 1 A SER 137 ? A SER 11 155 15 Y 1 A MET 127 ? A MET 1 156 15 Y 1 A GLY 128 ? A GLY 2 157 15 Y 1 A SER 129 ? A SER 3 158 15 Y 1 A SER 130 ? A SER 4 159 15 Y 1 A HIS 131 ? A HIS 5 160 15 Y 1 A HIS 132 ? A HIS 6 161 15 Y 1 A HIS 133 ? A HIS 7 162 15 Y 1 A HIS 134 ? A HIS 8 163 15 Y 1 A HIS 135 ? A HIS 9 164 15 Y 1 A HIS 136 ? A HIS 10 165 15 Y 1 A SER 137 ? A SER 11 166 16 Y 1 A MET 127 ? A MET 1 167 16 Y 1 A GLY 128 ? A GLY 2 168 16 Y 1 A SER 129 ? A SER 3 169 16 Y 1 A SER 130 ? A SER 4 170 16 Y 1 A HIS 131 ? A HIS 5 171 16 Y 1 A HIS 132 ? A HIS 6 172 16 Y 1 A HIS 133 ? A HIS 7 173 16 Y 1 A HIS 134 ? A HIS 8 174 16 Y 1 A HIS 135 ? A HIS 9 175 16 Y 1 A HIS 136 ? A HIS 10 176 16 Y 1 A SER 137 ? A SER 11 177 17 Y 1 A MET 127 ? A MET 1 178 17 Y 1 A GLY 128 ? A GLY 2 179 17 Y 1 A SER 129 ? A SER 3 180 17 Y 1 A SER 130 ? A SER 4 181 17 Y 1 A HIS 131 ? A HIS 5 182 17 Y 1 A HIS 132 ? A HIS 6 183 17 Y 1 A HIS 133 ? A HIS 7 184 17 Y 1 A HIS 134 ? A HIS 8 185 17 Y 1 A HIS 135 ? A HIS 9 186 17 Y 1 A HIS 136 ? A HIS 10 187 17 Y 1 A SER 137 ? A SER 11 188 18 Y 1 A MET 127 ? A MET 1 189 18 Y 1 A GLY 128 ? A GLY 2 190 18 Y 1 A SER 129 ? A SER 3 191 18 Y 1 A SER 130 ? A SER 4 192 18 Y 1 A HIS 131 ? A HIS 5 193 18 Y 1 A HIS 132 ? A HIS 6 194 18 Y 1 A HIS 133 ? A HIS 7 195 18 Y 1 A HIS 134 ? A HIS 8 196 18 Y 1 A HIS 135 ? A HIS 9 197 18 Y 1 A HIS 136 ? A HIS 10 198 18 Y 1 A SER 137 ? A SER 11 199 19 Y 1 A MET 127 ? A MET 1 200 19 Y 1 A GLY 128 ? A GLY 2 201 19 Y 1 A SER 129 ? A SER 3 202 19 Y 1 A SER 130 ? A SER 4 203 19 Y 1 A HIS 131 ? A HIS 5 204 19 Y 1 A HIS 132 ? A HIS 6 205 19 Y 1 A HIS 133 ? A HIS 7 206 19 Y 1 A HIS 134 ? A HIS 8 207 19 Y 1 A HIS 135 ? A HIS 9 208 19 Y 1 A HIS 136 ? A HIS 10 209 19 Y 1 A SER 137 ? A SER 11 210 20 Y 1 A MET 127 ? A MET 1 211 20 Y 1 A GLY 128 ? A GLY 2 212 20 Y 1 A SER 129 ? A SER 3 213 20 Y 1 A SER 130 ? A SER 4 214 20 Y 1 A HIS 131 ? A HIS 5 215 20 Y 1 A HIS 132 ? A HIS 6 216 20 Y 1 A HIS 133 ? A HIS 7 217 20 Y 1 A HIS 134 ? A HIS 8 218 20 Y 1 A HIS 135 ? A HIS 9 219 20 Y 1 A HIS 136 ? A HIS 10 220 20 Y 1 A SER 137 ? A SER 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 MK8 C C N N 247 MK8 N N N N 248 MK8 O O N N 249 MK8 CA C N S 250 MK8 CB C N N 251 MK8 CD C N N 252 MK8 CE C N N 253 MK8 CG C N N 254 MK8 CB1 C N N 255 MK8 OXT O N N 256 MK8 H H N N 257 MK8 H2 H N N 258 MK8 HB H N N 259 MK8 HBA H N N 260 MK8 HD H N N 261 MK8 HDA H N N 262 MK8 HE H N N 263 MK8 HEA H N N 264 MK8 HEB H N N 265 MK8 HG H N N 266 MK8 HGA H N N 267 MK8 HB1 H N N 268 MK8 HB1A H N N 269 MK8 HB1B H N N 270 MK8 HXT H N N 271 PHE N N N N 272 PHE CA C N S 273 PHE C C N N 274 PHE O O N N 275 PHE CB C N N 276 PHE CG C Y N 277 PHE CD1 C Y N 278 PHE CD2 C Y N 279 PHE CE1 C Y N 280 PHE CE2 C Y N 281 PHE CZ C Y N 282 PHE OXT O N N 283 PHE H H N N 284 PHE H2 H N N 285 PHE HA H N N 286 PHE HB2 H N N 287 PHE HB3 H N N 288 PHE HD1 H N N 289 PHE HD2 H N N 290 PHE HE1 H N N 291 PHE HE2 H N N 292 PHE HZ H N N 293 PHE HXT H N N 294 PRO N N N N 295 PRO CA C N S 296 PRO C C N N 297 PRO O O N N 298 PRO CB C N N 299 PRO CG C N N 300 PRO CD C N N 301 PRO OXT O N N 302 PRO H H N N 303 PRO HA H N N 304 PRO HB2 H N N 305 PRO HB3 H N N 306 PRO HG2 H N N 307 PRO HG3 H N N 308 PRO HD2 H N N 309 PRO HD3 H N N 310 PRO HXT H N N 311 SER N N N N 312 SER CA C N S 313 SER C C N N 314 SER O O N N 315 SER CB C N N 316 SER OG O N N 317 SER OXT O N N 318 SER H H N N 319 SER H2 H N N 320 SER HA H N N 321 SER HB2 H N N 322 SER HB3 H N N 323 SER HG H N N 324 SER HXT H N N 325 THR N N N N 326 THR CA C N S 327 THR C C N N 328 THR O O N N 329 THR CB C N R 330 THR OG1 O N N 331 THR CG2 C N N 332 THR OXT O N N 333 THR H H N N 334 THR H2 H N N 335 THR HA H N N 336 THR HB H N N 337 THR HG1 H N N 338 THR HG21 H N N 339 THR HG22 H N N 340 THR HG23 H N N 341 THR HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 MK8 C CA sing N N 235 MK8 C OXT sing N N 236 MK8 N H sing N N 237 MK8 N H2 sing N N 238 MK8 O C doub N N 239 MK8 CA N sing N N 240 MK8 CA CB sing N N 241 MK8 CB HB sing N N 242 MK8 CB HBA sing N N 243 MK8 CD CG sing N N 244 MK8 CD HD sing N N 245 MK8 CD HDA sing N N 246 MK8 CE CD sing N N 247 MK8 CE HE sing N N 248 MK8 CE HEA sing N N 249 MK8 CE HEB sing N N 250 MK8 CG CB sing N N 251 MK8 CG HG sing N N 252 MK8 CG HGA sing N N 253 MK8 CB1 CA sing N N 254 MK8 CB1 HB1 sing N N 255 MK8 CB1 HB1A sing N N 256 MK8 CB1 HB1B sing N N 257 MK8 OXT HXT sing N N 258 PHE N CA sing N N 259 PHE N H sing N N 260 PHE N H2 sing N N 261 PHE CA C sing N N 262 PHE CA CB sing N N 263 PHE CA HA sing N N 264 PHE C O doub N N 265 PHE C OXT sing N N 266 PHE CB CG sing N N 267 PHE CB HB2 sing N N 268 PHE CB HB3 sing N N 269 PHE CG CD1 doub Y N 270 PHE CG CD2 sing Y N 271 PHE CD1 CE1 sing Y N 272 PHE CD1 HD1 sing N N 273 PHE CD2 CE2 doub Y N 274 PHE CD2 HD2 sing N N 275 PHE CE1 CZ doub Y N 276 PHE CE1 HE1 sing N N 277 PHE CE2 CZ sing Y N 278 PHE CE2 HE2 sing N N 279 PHE CZ HZ sing N N 280 PHE OXT HXT sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 THR N CA sing N N 312 THR N H sing N N 313 THR N H2 sing N N 314 THR CA C sing N N 315 THR CA CB sing N N 316 THR CA HA sing N N 317 THR C O doub N N 318 THR C OXT sing N N 319 THR CB OG1 sing N N 320 THR CB CG2 sing N N 321 THR CB HB sing N N 322 THR OG1 HG1 sing N N 323 THR CG2 HG21 sing N N 324 THR CG2 HG22 sing N N 325 THR CG2 HG23 sing N N 326 THR OXT HXT sing N N 327 TRP N CA sing N N 328 TRP N H sing N N 329 TRP N H2 sing N N 330 TRP CA C sing N N 331 TRP CA CB sing N N 332 TRP CA HA sing N N 333 TRP C O doub N N 334 TRP C OXT sing N N 335 TRP CB CG sing N N 336 TRP CB HB2 sing N N 337 TRP CB HB3 sing N N 338 TRP CG CD1 doub Y N 339 TRP CG CD2 sing Y N 340 TRP CD1 NE1 sing Y N 341 TRP CD1 HD1 sing N N 342 TRP CD2 CE2 doub Y N 343 TRP CD2 CE3 sing Y N 344 TRP NE1 CE2 sing Y N 345 TRP NE1 HE1 sing N N 346 TRP CE2 CZ2 sing Y N 347 TRP CE3 CZ3 doub Y N 348 TRP CE3 HE3 sing N N 349 TRP CZ2 CH2 doub Y N 350 TRP CZ2 HZ2 sing N N 351 TRP CZ3 CH2 sing Y N 352 TRP CZ3 HZ3 sing N N 353 TRP CH2 HH2 sing N N 354 TRP OXT HXT sing N N 355 TYR N CA sing N N 356 TYR N H sing N N 357 TYR N H2 sing N N 358 TYR CA C sing N N 359 TYR CA CB sing N N 360 TYR CA HA sing N N 361 TYR C O doub N N 362 TYR C OXT sing N N 363 TYR CB CG sing N N 364 TYR CB HB2 sing N N 365 TYR CB HB3 sing N N 366 TYR CG CD1 doub Y N 367 TYR CG CD2 sing Y N 368 TYR CD1 CE1 sing Y N 369 TYR CD1 HD1 sing N N 370 TYR CD2 CE2 doub Y N 371 TYR CD2 HD2 sing N N 372 TYR CE1 CZ doub Y N 373 TYR CE1 HE1 sing N N 374 TYR CE2 CZ sing Y N 375 TYR CE2 HE2 sing N N 376 TYR CZ OH sing N N 377 TYR OH HH sing N N 378 TYR OXT HXT sing N N 379 VAL N CA sing N N 380 VAL N H sing N N 381 VAL N H2 sing N N 382 VAL CA C sing N N 383 VAL CA CB sing N N 384 VAL CA HA sing N N 385 VAL C O doub N N 386 VAL C OXT sing N N 387 VAL CB CG1 sing N N 388 VAL CB CG2 sing N N 389 VAL CB HB sing N N 390 VAL CG1 HG11 sing N N 391 VAL CG1 HG12 sing N N 392 VAL CG1 HG13 sing N N 393 VAL CG2 HG21 sing N N 394 VAL CG2 HG22 sing N N 395 VAL CG2 HG23 sing N N 396 VAL OXT HXT sing N N 397 #