HEADER CHAPERONE 23-NOV-10 2L6L TITLE SOLUTION STRUCTURE OF HUMAN J-PROTEIN CO-CHAPERONE, DPH4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 24; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DPH4, CSL-TYPE ZINC FINGER-CONTAINING PROTEIN 3, DPH4 COMPND 5 HOMOLOG; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-3A KEYWDS DPH4, ZN-CSL, J-DOMAIN, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.THAKUR,B.S.CHITOOR,H.S.ATREYA,P.D.SILVA REVDAT 2 07-AUG-19 2L6L 1 JRNL REMARK REVDAT 1 07-DEC-11 2L6L 0 JRNL AUTH A.THAKUR,B.CHITOOR,A.V.GOSWAMI,G.PAREEK,H.S.ATREYA,P.D'SILVA JRNL TITL STRUCTURE AND MECHANISTIC INSIGHTS INTO NOVEL IRON-MEDIATED JRNL TITL 2 MOONLIGHTING FUNCTIONS OF HUMAN J-PROTEIN COCHAPERONE, DPH4. JRNL REF J.BIOL.CHEM. V. 287 13194 2012 JRNL REFN ESSN 1083-351X JRNL PMID 22367199 JRNL DOI 10.1074/JBC.M112.339655 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XEASY, CYANA REMARK 3 AUTHORS : BARTELS ET AL. (XEASY), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000102021. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM [U-13C; U-15N] DPH4 REMARK 210 POLYPEPTIDE; 1MM ZN; 80MM SODIUM REMARK 210 CHLORIDE; 20MM TRIS; 90% H2O/10% REMARK 210 D2O; 1MM DPH4 POLYPEPTIDE; 1MM REMARK 210 ZN; 80MM SODIUM CHLORIDE; 20MM REMARK 210 TRIS; 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCACB; 3D CBCA(CO)NH; 3D 1H- REMARK 210 13C NOESY; 3D 1H-15N NOESY; 3D REMARK 210 H(CCO)NH-TOCSY; 3D (H)C(CO)NH- REMARK 210 TOCSY; 3D HNCO; 3D HBHA(CBCACO) REMARK 210 NH; GFT (3,2)D HA(CA)CO(N)H; GFT REMARK 210 (4,3)D NOESY-HCCH REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, NMRPIPE, XWINNMR, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 4 70.00 -105.31 REMARK 500 1 LYS A 9 40.06 -171.94 REMARK 500 1 TRP A 12 -70.11 -61.01 REMARK 500 1 ASP A 41 31.36 -143.37 REMARK 500 1 ASP A 46 48.56 -104.77 REMARK 500 1 ALA A 49 -61.85 73.85 REMARK 500 1 LYS A 67 -64.61 -101.31 REMARK 500 1 ILE A 68 51.67 -90.51 REMARK 500 1 ASN A 71 -177.20 -62.04 REMARK 500 1 LYS A 75 62.00 -153.61 REMARK 500 1 PRO A 92 97.92 -69.68 REMARK 500 1 ASP A 94 -71.36 -77.30 REMARK 500 1 ALA A 95 -178.62 172.85 REMARK 500 1 MET A 102 104.65 -59.98 REMARK 500 1 SER A 132 -40.62 -161.49 REMARK 500 1 ASP A 137 54.28 -95.16 REMARK 500 1 THR A 138 -64.69 -167.48 REMARK 500 1 SER A 140 83.79 -69.83 REMARK 500 1 HIS A 153 29.49 -152.96 REMARK 500 1 HIS A 154 87.91 58.76 REMARK 500 2 LYS A 9 87.20 57.89 REMARK 500 2 LYS A 10 -169.51 -110.96 REMARK 500 2 ALA A 22 165.95 -49.53 REMARK 500 2 ASP A 41 49.46 -151.62 REMARK 500 2 ASP A 46 82.54 57.81 REMARK 500 2 VAL A 47 78.02 -114.03 REMARK 500 2 ALA A 49 -60.12 74.41 REMARK 500 2 LYS A 67 -65.62 -96.87 REMARK 500 2 ILE A 68 54.81 -91.45 REMARK 500 2 ARG A 76 -77.74 67.71 REMARK 500 2 PRO A 92 96.17 -69.73 REMARK 500 2 ASP A 94 -69.81 -101.34 REMARK 500 2 ALA A 95 -178.55 -173.76 REMARK 500 2 ASP A 137 55.16 -100.65 REMARK 500 2 THR A 138 -55.97 -171.90 REMARK 500 2 SER A 140 86.06 -68.64 REMARK 500 2 HIS A 147 -50.01 -150.57 REMARK 500 2 TYR A 148 103.35 62.71 REMARK 500 3 GLN A 6 177.55 62.72 REMARK 500 3 LYS A 9 136.68 -177.88 REMARK 500 3 ALA A 22 -174.73 -65.43 REMARK 500 3 SER A 25 -71.35 -67.86 REMARK 500 3 ASP A 41 -49.54 -138.05 REMARK 500 3 SER A 44 -71.99 -99.28 REMARK 500 3 ASP A 46 -72.93 -171.78 REMARK 500 3 LYS A 67 -64.01 -104.39 REMARK 500 3 ILE A 68 46.85 -89.59 REMARK 500 3 ASN A 71 -170.87 -60.90 REMARK 500 3 GLU A 77 -73.75 -67.43 REMARK 500 3 ASP A 79 -70.18 -62.60 REMARK 500 REMARK 500 THIS ENTRY HAS 392 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 115 SG REMARK 620 2 CYS A 117 SG 104.3 REMARK 620 3 CYS A 139 SG 117.7 105.7 REMARK 620 4 CYS A 136 SG 103.6 116.8 109.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17293 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 MET1 IS A PART OF ORIGINAL PROTEIN SEQUENCE ACCORDING TO SEQUENCE REMARK 999 GIVEN IN NCBI DATABASE(AL137804). DBREF 2L6L A 2 149 UNP Q6P3W2 DJC24_HUMAN 1 148 SEQADV 2L6L MET A 1 UNP Q6P3W2 SEE REMARK 999 SEQADV 2L6L HIS A 150 UNP Q6P3W2 EXPRESSION TAG SEQADV 2L6L HIS A 151 UNP Q6P3W2 EXPRESSION TAG SEQADV 2L6L HIS A 152 UNP Q6P3W2 EXPRESSION TAG SEQADV 2L6L HIS A 153 UNP Q6P3W2 EXPRESSION TAG SEQADV 2L6L HIS A 154 UNP Q6P3W2 EXPRESSION TAG SEQADV 2L6L HIS A 155 UNP Q6P3W2 EXPRESSION TAG SEQRES 1 A 155 MET MET ALA VAL GLU GLN MET PRO LYS LYS ASP TRP TYR SEQRES 2 A 155 SER ILE LEU GLY ALA ASP PRO SER ALA ASN ILE SER ASP SEQRES 3 A 155 LEU LYS GLN LYS TYR GLN LYS LEU ILE LEU MET TYR HIS SEQRES 4 A 155 PRO ASP LYS GLN SER THR ASP VAL PRO ALA GLY THR VAL SEQRES 5 A 155 GLU GLU CYS VAL GLN LYS PHE ILE GLU ILE ASP GLN ALA SEQRES 6 A 155 TRP LYS ILE LEU GLY ASN GLU GLU THR LYS ARG GLU TYR SEQRES 7 A 155 ASP LEU GLN ARG CYS GLU ASP ASP LEU ARG ASN VAL GLY SEQRES 8 A 155 PRO VAL ASP ALA GLN VAL TYR LEU GLU GLU MET SER TRP SEQRES 9 A 155 ASN GLU GLY ASP HIS SER PHE TYR LEU SER CYS ARG CYS SEQRES 10 A 155 GLY GLY LYS TYR SER VAL SER LYS ASP GLU ALA GLU GLU SEQRES 11 A 155 VAL SER LEU ILE SER CYS ASP THR CYS SER LEU ILE ILE SEQRES 12 A 155 GLU LEU LEU HIS TYR ASN HIS HIS HIS HIS HIS HIS HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 LYS A 10 GLY A 17 1 8 HELIX 2 2 ASN A 23 HIS A 39 1 17 HELIX 3 3 ALA A 49 LEU A 69 1 21 HELIX 4 4 ARG A 76 ASN A 89 1 14 HELIX 5 5 ASP A 126 VAL A 131 1 6 SHEET 1 A 3 ALA A 95 TYR A 98 0 SHEET 2 A 3 ILE A 142 LEU A 146 1 O GLU A 144 N VAL A 97 SHEET 3 A 3 LEU A 133 SER A 135 -1 N ILE A 134 O ILE A 143 SHEET 1 B 3 SER A 103 ASN A 105 0 SHEET 2 B 3 SER A 110 SER A 114 -1 O SER A 110 N ASN A 105 SHEET 3 B 3 LYS A 120 SER A 124 -1 O TYR A 121 N LEU A 113 LINK SG CYS A 115 ZN ZN A 201 1555 1555 2.28 LINK SG CYS A 117 ZN ZN A 201 1555 1555 2.28 LINK SG CYS A 139 ZN ZN A 201 1555 1555 2.28 LINK SG CYS A 136 ZN ZN A 201 1555 1555 2.30 SITE 1 AC1 4 CYS A 115 CYS A 117 CYS A 136 CYS A 139 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1