HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-DEC-10 2L7Q TITLE SOLUTION NMR STRUCTURE OF CONJUGATE TRANSPOSON PROTEIN BVU_1572(27- TITLE 2 141) FROM BACTEROIDES VULGATUS, NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET BVR155 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED PROTEIN FOUND IN CONJUGATE TRANSPOSON; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 27-141; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482 / DSM 1447 / NCTC 11154; SOURCE 5 GENE: BVU_1572; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 21-23C KEYWDS NESG, STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.YANG,T.A.RAMELOT,J.R.CORT,D.WANG,C.CICCOSANTI,H.JANJUA,T.B.ACTON, AUTHOR 2 R.XIAO,J.K.EVERETT,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (NESG) REVDAT 6 14-JUN-23 2L7Q 1 REMARK SEQADV REVDAT 5 06-MAR-13 2L7Q 1 JRNL REVDAT 4 30-JAN-13 2L7Q 1 JRNL REVDAT 3 22-FEB-12 2L7Q 1 KEYWDS REVDAT 2 14-DEC-11 2L7Q 1 JRNL VERSN REVDAT 1 29-DEC-10 2L7Q 0 JRNL AUTH T.A.RAMELOT,Y.YANG,R.XIAO,T.B.ACTON,J.K.EVERETT, JRNL AUTH 2 G.T.MONTELIONE,M.A.KENNEDY JRNL TITL SOLUTION NMR STRUCTURE OF BT_0084, A CONJUGATIVE TRANSPOSON JRNL TITL 2 LIPOPROTEIN FROM BACTEROIDES THETAIOTAMICRON. JRNL REF PROTEINS V. 80 667 2012 JRNL REFN ISSN 0887-3585 JRNL PMID 22116783 JRNL DOI 10.1002/PROT.23235 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2008, CNS 1.2, PSVS 1.4 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS), BHATTACHARYA AND MONTELIONE (PSVS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS WATER REFINEMENT REMARK 4 REMARK 4 2L7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000102061. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.53 MM [U-100% 13C; U-100% 15N] REMARK 210 CONJUGATE TRANSPOSON PROTEIN BVU_ REMARK 210 1572(27-141) FROM BACTEROIDES REMARK 210 VULGATUS, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 0.02 MM SODIUM AZIDE, REMARK 210 10 MM DTT, 90% H2O/10% D2O; 0.48 REMARK 210 MM [U-5% 13C; U-100% 15N] REMARK 210 CONJUGATE TRANSPOSON PROTEIN BVU_ REMARK 210 1572(27-141) FROM BACTEROIDES REMARK 210 VULGATUS, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 10 MM DTT, 0.02 MM REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 0.53 MM [U-100% 13C; U-100% 15N] REMARK 210 CONJUGATE TRANSPOSON PROTEIN BVU_ REMARK 210 1572(27-141) FROM BACTEROIDES REMARK 210 VULGATUS, 20 MM MES, 100 MM REMARK 210 SODIUM CHLORIDE, 5 MM CALCIUM REMARK 210 CHLORIDE, 0.02 % SODIUM AZIDE, REMARK 210 10 MM DTT-18, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-13C HSQC-CT; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 3D HNCO; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HN(CO)CA; 3D HBHA(CO)NH; REMARK 210 3D H(CCO)NH; 3D C(CCO)NH; 3D REMARK 210 HCCH-COSY; 3D HCCH-TOCSY; 3D CCH- REMARK 210 TOCSY; 4D CC-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, TOPSPIN 2.1.4, REMARK 210 AUTOSTRUCTURE 2.2.1, X-PLOR NIH REMARK 210 2.25, SPARKY 3.113, AUTOASSIGN REMARK 210 2.30, PDBSTAT 5.1, PINE SERVER REMARK 210 1.0, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 15 HZ2 LYS A 36 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 2 77.71 -114.29 REMARK 500 1 GLN A 8 112.77 -160.87 REMARK 500 1 GLU A 9 91.90 47.66 REMARK 500 1 PHE A 12 101.31 -165.40 REMARK 500 1 PRO A 18 106.54 -49.72 REMARK 500 1 ALA A 24 32.29 -86.00 REMARK 500 1 VAL A 45 -44.39 75.34 REMARK 500 1 TYR A 46 178.67 63.81 REMARK 500 1 PRO A 53 -75.40 -77.16 REMARK 500 1 ASN A 70 -23.74 79.59 REMARK 500 1 GLN A 87 -48.04 -165.36 REMARK 500 1 GLU A 91 -55.53 -155.00 REMARK 500 1 ASN A 105 -99.20 64.08 REMARK 500 1 ASN A 114 -77.38 70.04 REMARK 500 1 HIS A 123 137.75 -174.63 REMARK 500 2 ASN A 2 65.33 62.62 REMARK 500 2 ILE A 6 40.03 -83.22 REMARK 500 2 GLN A 7 94.55 -58.26 REMARK 500 2 GLN A 8 -71.31 66.54 REMARK 500 2 GLU A 9 -38.78 70.25 REMARK 500 2 PRO A 11 -61.48 -92.25 REMARK 500 2 PRO A 18 99.90 -62.89 REMARK 500 2 ASP A 21 -58.10 -161.21 REMARK 500 2 GLU A 22 172.81 176.01 REMARK 500 2 ILE A 42 -77.69 -78.91 REMARK 500 2 TYR A 46 92.37 58.11 REMARK 500 2 THR A 65 105.25 61.89 REMARK 500 2 ASN A 70 18.81 53.18 REMARK 500 2 ALA A 92 -167.53 60.76 REMARK 500 2 ASN A 114 -31.47 163.95 REMARK 500 2 LYS A 116 152.55 66.01 REMARK 500 2 HIS A 120 65.18 32.78 REMARK 500 3 GLN A 8 -47.04 -135.01 REMARK 500 3 GLU A 9 138.67 70.81 REMARK 500 3 TYR A 10 108.19 -160.88 REMARK 500 3 ASP A 26 -48.73 70.58 REMARK 500 3 ILE A 42 -159.09 -119.49 REMARK 500 3 TYR A 46 111.71 69.88 REMARK 500 3 PRO A 69 93.24 -61.71 REMARK 500 3 ASN A 70 -43.99 163.98 REMARK 500 3 GLU A 91 30.26 -96.64 REMARK 500 3 TRP A 103 -43.66 -138.74 REMARK 500 3 GLU A 118 -92.84 -77.68 REMARK 500 3 HIS A 119 -79.33 61.59 REMARK 500 3 HIS A 122 -46.82 -133.63 REMARK 500 3 HIS A 123 -30.63 71.07 REMARK 500 4 ASN A 2 25.44 -77.46 REMARK 500 4 ASP A 5 120.28 69.09 REMARK 500 4 GLN A 8 -174.93 -172.75 REMARK 500 4 TYR A 10 109.43 -161.13 REMARK 500 REMARK 500 THIS ENTRY HAS 290 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17370 RELATED DB: BMRB REMARK 900 RELATED ID: BVR155 RELATED DB: TARGETDB DBREF 2L7Q A 2 116 UNP A6L0P5 A6L0P5_BACV8 27 141 SEQADV 2L7Q MET A 1 UNP A6L0P5 INITIATING METHIONINE SEQADV 2L7Q LEU A 117 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q GLU A 118 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 119 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 120 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 121 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 122 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 123 UNP A6L0P5 EXPRESSION TAG SEQADV 2L7Q HIS A 124 UNP A6L0P5 EXPRESSION TAG SEQRES 1 A 124 MET ASN GLU LEU ASP ILE GLN GLN GLU TYR PRO PHE THR SEQRES 2 A 124 VAL GLU SER MET PRO VAL ALA ASP GLU ILE ALA GLY ASP SEQRES 3 A 124 GLU THR VAL GLU ILE ARG LEU GLU ILE LYS PRO SER GLY SEQRES 4 A 124 ASN PHE ILE GLY THR VAL TYR THR LEU ARG TYR PHE GLN SEQRES 5 A 124 PRO ASP GLY LYS GLY SER LEU LYS MET GLU ASP GLY THR SEQRES 6 A 124 VAL LEU LYS PRO ASN ASP ARG TYR LEU LEU ASN GLU TRP SEQRES 7 A 124 LYS PHE ARG LEU TYR TYR THR SER GLN SER ASP LYS GLU SEQRES 8 A 124 ALA GLN THR ILE ASP LEU TYR PHE GLU ASP ASN TRP GLY SEQRES 9 A 124 ASN LEU GLN GLN LEU THR TYR ASP PHE ASN GLY LYS LEU SEQRES 10 A 124 GLU HIS HIS HIS HIS HIS HIS SHEET 1 A 4 PHE A 12 SER A 16 0 SHEET 2 A 4 GLU A 27 PRO A 37 -1 O GLU A 34 N GLU A 15 SHEET 3 A 4 LYS A 79 SER A 86 -1 O PHE A 80 N LEU A 33 SHEET 4 A 4 GLY A 57 MET A 61 -1 N LYS A 60 O TYR A 83 SHEET 1 B 4 ARG A 72 TYR A 73 0 SHEET 2 B 4 THR A 47 PHE A 51 -1 N LEU A 48 O TYR A 73 SHEET 3 B 4 GLN A 93 ASP A 101 -1 O TYR A 98 N ARG A 49 SHEET 4 B 4 ASN A 105 PHE A 113 -1 O PHE A 113 N GLN A 93 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1