data_2L8F # _entry.id 2L8F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L8F pdb_00002l8f 10.2210/pdb2l8f/pdb RCSB RCSB102086 ? ? BMRB 17406 ? ? WWPDB D_1000102086 ? ? # _pdbx_database_related.db_id 17406 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L8F _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-01-11 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lerman, Y.' 1 'Kennedy, S.D.' 2 'Turner, D.H.' 3 # _citation.id primary _citation.title ;NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions. ; _citation.journal_abbrev Rna _citation.journal_volume 17 _citation.page_first 1664 _citation.page_last 1677 _citation.year 2011 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21778280 _citation.pdbx_database_id_DOI 10.1261/rna.2641911 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lerman, Y.V.' 1 ? primary 'Kennedy, S.D.' 2 ? primary 'Shankar, N.' 3 ? primary 'Parisien, M.' 4 ? primary 'Major, F.' 5 ? primary 'Turner, D.H.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3') ; 3522.154 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3') ; 3545.194 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GUGAAGCCCGU GUGAAGCCCGU A ? 2 polyribonucleotide no no CGGAGGACACU CGGAGGACACU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 G n 1 4 A n 1 5 A n 1 6 G n 1 7 C n 1 8 C n 1 9 C n 1 10 G n 1 11 U n 2 1 C n 2 2 G n 2 3 G n 2 4 A n 2 5 G n 2 6 G n 2 7 A n 2 8 C n 2 9 A n 2 10 C n 2 11 U n # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 2L8F 2L8F 1 ? ? ? 2 PDB 2L8F 2L8F 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2L8F A 1 ? 11 ? 2L8F 1 ? 11 ? 1 11 2 2 2L8F B 1 ? 11 ? 2L8F 12 ? 22 ? 12 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 2 1 1 '2D 1H-15N HSQC' 2 2 1 '2D 1H-13C HSQC' 3 3 1 '2D 1H-13C HSQC' 1 4 2 '2D 1H-13C HSQC' 2 5 1 '2D 1H-1H NOESY' 2 6 1 '2D 1H-1H NOESY' 1 7 1 '2D 1H-1H NOESY' 1 8 2 '2D 1H-1H NOESY' 2 9 2 '2D 1H-1H NOESY' 1 10 2 '2D 1H-1H TOCSY' 2 11 2 '2D 1H-1H TOCSY' 1 12 2 '2D 1H-1H COSY' 1 13 2 '2D 31P-1H COSY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 0.1 6.5 ambient ? 293 K 2 0.1 6.5 ambient ? 273 K 3 0.1 5 ambient ? 273 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;1.5 mM RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3'), 1.5 mM RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3'), 80 mM sodium chloride, 10 mM sodium phosphate, 0.5 mM EDTA, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;1.5 mM RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3'), 1.5 mM RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3'), 80 mM sodium chloride, 10 mM sodium phosphate, 0.5 mM EDTA-10, 100% D2O ; 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian INOVA 1 'Varian INOVA' 600 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2L8F _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'no restraint violations; low constraint energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L8F _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation .18 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L8F _pdbx_nmr_representative.selection_criteria 'lowest constraint energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.3 1 Goddard 'chemical shift assignment' Sparky 3.114 2 Goddard 'data analysis' Sparky 3.114 3 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm' 'structure solution' Amber ? 4 Varian collection VNMR 6.1C 5 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS 1.2 6 ? refinement Amber ? 7 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2L8F _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L8F _struct.title 'Structure of a 4X4 Nucleotide RNA Internal Loop from an R2 Retrotransposon' _struct.pdbx_model_details 'lowest constraint energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L8F _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA motif, internal loop, 3RRs, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 10 N3 ? ? A G 1 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 10 O2 ? ? A G 1 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 10 N4 ? ? A G 1 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 B A 9 N1 ? ? A U 2 B A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 B A 9 N6 ? ? A U 2 B A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 3 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 3 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 3 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A A 4 N3 ? ? ? 1_555 B A 7 N6 ? ? A A 4 B A 18 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog10 hydrog ? ? A A 5 N7 ? ? ? 1_555 B G 6 N2 ? ? A A 5 B G 17 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 6 N7 ? ? ? 1_555 B G 5 N2 ? ? A G 6 B G 16 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog12 hydrog ? ? A C 7 N4 ? ? ? 1_555 B A 4 N1 ? ? A C 7 B A 15 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog13 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 3 N1 ? ? A C 8 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 3 O6 ? ? A C 8 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 3 N2 ? ? A C 8 B G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 9 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 9 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 9 B G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 1 N3 ? ? A G 10 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 1 O2 ? ? A G 10 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 1 N4 ? ? A G 10 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2L8F _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 U 2 2 2 U U A . n A 1 3 G 3 3 3 G G A . n A 1 4 A 4 4 4 A A A . n A 1 5 A 5 5 5 A A A . n A 1 6 G 6 6 6 G G A . n A 1 7 C 7 7 7 C C A . n A 1 8 C 8 8 8 C C A . n A 1 9 C 9 9 9 C C A . n A 1 10 G 10 10 10 G G A . n A 1 11 U 11 11 11 U U A . n B 2 1 C 1 12 12 C C B . n B 2 2 G 2 13 13 G G B . n B 2 3 G 3 14 14 G G B . n B 2 4 A 4 15 15 A A B . n B 2 5 G 5 16 16 G G B . n B 2 6 G 6 17 17 G G B . n B 2 7 A 7 18 18 A A B . n B 2 8 C 8 19 19 C C B . n B 2 9 A 9 20 20 A A B . n B 2 10 C 10 21 21 C C B . n B 2 11 U 11 22 22 U U B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-31 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.003 _pdbx_nmr_ensemble_rms.distance_rms_dev_error ? _pdbx_nmr_ensemble_rms.entry_id 2L8F _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3')-1 ; 1.5 ? mM ? 1 ;RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3')-2 ; 1.5 ? mM ? 1 'sodium chloride-3' 80 ? mM ? 1 'sodium phosphate-4' 10 ? mM ? 1 EDTA-5 0.5 ? mM ? 1 ;RNA (5'-R(*GP*UP*GP*AP*AP*GP*CP*CP*CP*GP*U)-3')-6 ; 1.5 ? mM ? 2 ;RNA (5'-R(*CP*GP*GP*AP*GP*GP*AP*CP*AP*CP*U)-3')-7 ; 1.5 ? mM ? 2 'sodium chloride-8' 80 ? mM ? 2 'sodium phosphate-9' 10 ? mM ? 2 EDTA-10 0.5 ? mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2L8F _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 215 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 79 _pdbx_nmr_constraints.NOE_long_range_total_count 40 _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 136 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 112.74 108.50 4.24 0.70 N 2 1 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.32 121.90 -4.58 0.70 N 3 1 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.17 121.90 -4.73 0.70 N 4 1 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.43 121.90 -4.47 0.70 N 5 1 N1 B A 18 ? ? C6 B A 18 ? ? N6 B A 18 ? ? 114.93 118.60 -3.67 0.60 N 6 1 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.43 121.90 -4.47 0.70 N 7 1 C5 B A 20 ? ? C6 B A 20 ? ? N1 B A 20 ? ? 120.80 117.70 3.10 0.50 N 8 1 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.38 121.90 -4.52 0.70 N 9 2 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.12 121.90 -4.78 0.70 N 10 2 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.60 121.90 -4.30 0.70 N 11 2 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.26 121.90 -4.64 0.70 N 12 2 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 113.51 108.50 5.01 0.70 N 13 2 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.08 121.90 -4.82 0.70 N 14 2 "O4'" B C 21 ? ? "C1'" B C 21 ? ? N1 B C 21 ? ? 113.19 108.50 4.69 0.70 N 15 2 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.32 121.90 -4.58 0.70 N 16 3 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.38 121.90 -4.52 0.70 N 17 3 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.33 121.90 -4.57 0.70 N 18 3 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 116.94 121.90 -4.96 0.70 N 19 3 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 113.18 108.50 4.68 0.70 N 20 3 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.37 121.90 -4.53 0.70 N 21 3 "O4'" B C 21 ? ? "C1'" B C 21 ? ? N1 B C 21 ? ? 112.98 108.50 4.48 0.70 N 22 3 N1 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 122.55 118.90 3.65 0.60 N 23 3 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 116.98 121.90 -4.92 0.70 N 24 4 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 112.85 108.50 4.35 0.70 N 25 4 C5 A A 4 ? ? C6 A A 4 ? ? N1 A A 4 ? ? 120.80 117.70 3.10 0.50 N 26 4 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.24 121.90 -4.66 0.70 N 27 4 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.22 121.90 -4.68 0.70 N 28 4 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.10 121.90 -4.80 0.70 N 29 4 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 112.82 108.50 4.32 0.70 N 30 4 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.67 121.90 -4.23 0.70 N 31 4 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.25 121.90 -4.65 0.70 N 32 5 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.42 121.90 -4.48 0.70 N 33 5 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.42 121.90 -4.48 0.70 N 34 5 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.50 121.90 -4.40 0.70 N 35 5 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 112.80 108.50 4.30 0.70 N 36 5 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.33 121.90 -4.57 0.70 N 37 5 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.13 121.90 -4.77 0.70 N 38 6 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.65 121.90 -4.25 0.70 N 39 6 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.36 121.90 -4.54 0.70 N 40 6 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.31 121.90 -4.59 0.70 N 41 6 N1 B A 18 ? ? C6 B A 18 ? ? N6 B A 18 ? ? 114.83 118.60 -3.77 0.60 N 42 6 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.23 121.90 -4.67 0.70 N 43 6 "O4'" B C 21 ? ? "C1'" B C 21 ? ? N1 B C 21 ? ? 113.16 108.50 4.66 0.70 N 44 6 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.37 121.90 -4.53 0.70 N 45 6 "O4'" B U 22 ? ? "C1'" B U 22 ? ? N1 B U 22 ? ? 112.82 108.50 4.32 0.70 N 46 7 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.55 121.90 -4.35 0.70 N 47 7 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.45 121.90 -4.45 0.70 N 48 7 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.26 121.90 -4.64 0.70 N 49 7 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.00 121.90 -4.90 0.70 N 50 7 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.15 121.90 -4.75 0.70 N 51 8 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.06 121.90 -4.84 0.70 N 52 8 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.46 121.90 -4.44 0.70 N 53 8 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.31 121.90 -4.59 0.70 N 54 8 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 112.96 108.50 4.46 0.70 N 55 8 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 116.70 121.90 -5.20 0.70 N 56 8 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.07 121.90 -4.83 0.70 N 57 9 "O4'" A U 2 ? ? "C1'" A U 2 ? ? N1 A U 2 ? ? 112.84 108.50 4.34 0.70 N 58 9 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 117.46 121.90 -4.44 0.70 N 59 9 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.01 121.90 -4.89 0.70 N 60 9 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.19 121.90 -4.71 0.70 N 61 9 N1 B A 18 ? ? C6 B A 18 ? ? N6 B A 18 ? ? 114.61 118.60 -3.99 0.60 N 62 9 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 117.30 121.90 -4.60 0.70 N 63 9 "O4'" B C 21 ? ? "C1'" B C 21 ? ? N1 B C 21 ? ? 112.74 108.50 4.24 0.70 N 64 9 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.18 121.90 -4.72 0.70 N 65 10 N1 A A 4 ? ? C6 A A 4 ? ? N6 A A 4 ? ? 114.81 118.60 -3.79 0.60 N 66 10 N3 A C 8 ? ? C2 A C 8 ? ? O2 A C 8 ? ? 116.92 121.90 -4.98 0.70 N 67 10 N3 A C 9 ? ? C2 A C 9 ? ? O2 A C 9 ? ? 117.18 121.90 -4.72 0.70 N 68 10 N3 B C 12 ? ? C2 B C 12 ? ? O2 B C 12 ? ? 117.36 121.90 -4.54 0.70 N 69 10 "O4'" B G 17 ? ? "C1'" B G 17 ? ? N9 B G 17 ? ? 113.46 108.50 4.96 0.70 N 70 10 N3 B C 19 ? ? C2 B C 19 ? ? O2 B C 19 ? ? 116.97 121.90 -4.93 0.70 N 71 10 "O4'" B C 21 ? ? "C1'" B C 21 ? ? N1 B C 21 ? ? 112.73 108.50 4.23 0.70 N 72 10 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.03 121.90 -4.87 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 G B 17 ? ? 0.096 'SIDE CHAIN' 2 3 G A 6 ? ? 0.051 'SIDE CHAIN' 3 3 G B 17 ? ? 0.094 'SIDE CHAIN' 4 3 U B 22 ? ? 0.065 'SIDE CHAIN' 5 4 G B 17 ? ? 0.096 'SIDE CHAIN' 6 5 G A 6 ? ? 0.057 'SIDE CHAIN' 7 5 G B 17 ? ? 0.102 'SIDE CHAIN' 8 6 G B 17 ? ? 0.071 'SIDE CHAIN' 9 6 U B 22 ? ? 0.067 'SIDE CHAIN' 10 7 G B 17 ? ? 0.068 'SIDE CHAIN' 11 7 A B 18 ? ? 0.055 'SIDE CHAIN' 12 8 G A 6 ? ? 0.051 'SIDE CHAIN' 13 8 G B 17 ? ? 0.094 'SIDE CHAIN' 14 9 G B 17 ? ? 0.074 'SIDE CHAIN' 15 10 G B 17 ? ? 0.101 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2L8F 'double helix' 2L8F 'a-form double helix' 2L8F 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 10 1_555 -0.661 -0.109 -0.467 -19.536 -11.826 0.639 1 A_G1:C21_B A 1 ? B 21 ? 19 1 1 A U 2 1_555 B A 9 1_555 -0.198 0.029 -0.088 -9.410 -7.856 -1.417 2 A_U2:A20_B A 2 ? B 20 ? 20 1 1 A G 3 1_555 B C 8 1_555 -0.214 -0.048 0.020 -0.723 -0.634 -0.120 3 A_G3:C19_B A 3 ? B 19 ? 19 1 1 A A 4 1_555 B A 7 1_555 6.565 -4.113 -0.170 11.652 -5.096 -8.703 4 A_A4:A18_B A 4 ? B 18 ? ? 6 1 A A 5 1_555 B G 6 1_555 -6.686 -5.106 0.783 -23.410 -0.480 -3.879 5 A_A5:G17_B A 5 ? B 17 ? ? ? 1 A G 6 1_555 B G 5 1_555 -6.967 -4.456 0.442 -0.653 -8.589 -2.297 6 A_G6:G16_B A 6 ? B 16 ? ? 10 1 A C 7 1_555 B A 4 1_555 -2.163 0.414 -0.254 6.545 -11.833 18.325 7 A_C7:A15_B A 7 ? B 15 ? ? 1 1 A C 8 1_555 B G 3 1_555 0.425 -0.050 -0.251 6.584 -9.369 1.050 8 A_C8:G14_B A 8 ? B 14 ? 19 1 1 A C 9 1_555 B G 2 1_555 0.335 -0.074 -0.263 5.347 -9.369 0.309 9 A_C9:G13_B A 9 ? B 13 ? 19 1 1 A G 10 1_555 B C 1 1_555 -0.362 -0.084 -0.084 -1.984 -12.323 0.087 10 A_G10:C12_B A 10 ? B 12 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 10 1_555 A U 2 1_555 B A 9 1_555 -0.189 -1.623 3.179 -0.647 2.398 29.434 -3.669 0.240 3.044 4.708 1.271 29.536 1 AA_G1U2:A20C21_BB A 1 ? B 21 ? A 2 ? B 20 ? 1 A U 2 1_555 B A 9 1_555 A G 3 1_555 B C 8 1_555 0.427 -1.523 3.145 -2.004 7.128 28.979 -4.287 -1.203 2.668 13.959 3.925 29.891 2 AA_U2G3:C19A20_BB A 2 ? B 20 ? A 3 ? B 19 ? 1 A G 3 1_555 B C 8 1_555 A A 4 1_555 B A 7 1_555 -0.576 -1.303 3.134 1.346 3.159 59.719 -1.456 0.641 3.056 3.169 -1.351 59.808 3 AA_G3A4:A18C19_BB A 3 ? B 19 ? A 4 ? B 18 ? 1 A A 4 1_555 B A 7 1_555 A A 5 1_555 B G 6 1_555 0.809 -1.114 4.071 5.004 -1.287 -13.057 6.005 8.931 3.399 5.392 20.964 -14.038 4 AA_A4A5:G17A18_BB A 4 ? B 18 ? A 5 ? B 17 ? 1 A A 5 1_555 B G 6 1_555 A G 6 1_555 B G 5 1_555 -0.487 0.164 3.275 -14.702 1.882 38.111 0.021 -0.977 3.244 2.759 21.547 40.792 5 AA_A5G6:G16G17_BB A 5 ? B 17 ? A 6 ? B 16 ? 1 A G 6 1_555 B G 5 1_555 A C 7 1_555 B A 4 1_555 1.020 -0.638 3.351 -3.993 9.113 54.043 -1.237 -1.345 3.137 9.933 4.353 54.884 6 AA_G6C7:A15G16_BB A 6 ? B 16 ? A 7 ? B 15 ? 1 A C 7 1_555 B A 4 1_555 A C 8 1_555 B G 3 1_555 -0.804 -1.447 3.385 -2.509 8.836 37.162 -3.314 0.913 3.021 13.611 3.865 38.241 7 AA_C7C8:G14A15_BB A 7 ? B 15 ? A 8 ? B 14 ? 1 A C 8 1_555 B G 3 1_555 A C 9 1_555 B G 2 1_555 -0.084 -1.960 3.354 1.983 10.524 27.857 -5.830 0.543 2.455 20.907 -3.940 29.807 8 AA_C8C9:G13G14_BB A 8 ? B 14 ? A 9 ? B 13 ? 1 A C 9 1_555 B G 2 1_555 A G 10 1_555 B C 1 1_555 -0.091 -1.828 3.474 -1.285 12.881 26.179 -6.269 -0.082 2.336 26.477 2.641 29.155 9 AA_C9G10:C12G13_BB A 9 ? B 13 ? A 10 ? B 12 ? #