HEADER VIRAL PROTEIN 19-JAN-11 2L8K TITLE NMR STRUCTURE OF THE ARTERIVIRUS NONSTRUCTURAL PROTEIN 7 ALPHA (NSP7 TITLE 2 ALPHA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 1454-1575; COMPND 5 SYNONYM: NSP7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUINE ARTERITIS VIRUS; SOURCE 3 ORGANISM_COMMON: EAV; SOURCE 4 ORGANISM_TAXID: 299386; SOURCE 5 STRAIN: BUCYRUS; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PETM11 KEYWDS VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.R.CONTE,C.GAUDIN,I.MANOLARIDIS,P.W.TUCKER,G.KELLY REVDAT 2 08-FEB-23 2L8K 1 REMARK SEQADV REVDAT 1 06-JUL-11 2L8K 0 JRNL AUTH I.MANOLARIDIS,C.GAUDIN,C.C.POSTHUMA,J.C.ZEVENHOVEN-DOBBE, JRNL AUTH 2 I.IMBERT,B.CANARD,G.KELLY,P.A.TUCKER,M.R.CONTE,E.J.SNIJDER JRNL TITL STRUCTURE AND GENETIC ANALYSIS OF THE ARTERIVIRUS JRNL TITL 2 NONSTRUCTURAL PROTEIN 7{ALPHA}. JRNL REF J.VIROL. V. 85 7449 2011 JRNL REFN ISSN 0022-538X JRNL PMID 21561912 JRNL DOI 10.1128/JVI.00255-11 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000102091. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 2 -89.11 41.28 REMARK 500 1 LEU A 6 -83.48 63.71 REMARK 500 1 CYS A 23 156.49 -49.48 REMARK 500 1 ASN A 31 78.22 -161.73 REMARK 500 1 LEU A 36 -66.86 -95.46 REMARK 500 1 ASP A 55 164.94 -48.02 REMARK 500 1 ASP A 81 -158.14 -76.07 REMARK 500 1 LEU A 89 106.49 -177.94 REMARK 500 1 LYS A 96 160.63 178.89 REMARK 500 1 ASP A 97 -86.37 44.41 REMARK 500 1 ASP A 98 18.23 -149.09 REMARK 500 2 LEU A 2 -169.68 175.82 REMARK 500 2 LEU A 6 86.14 51.38 REMARK 500 2 ALA A 8 108.31 69.37 REMARK 500 2 CYS A 23 153.58 -44.29 REMARK 500 2 ASN A 31 73.92 -154.71 REMARK 500 2 LEU A 36 -66.91 -96.54 REMARK 500 2 GLU A 74 94.17 -69.42 REMARK 500 2 ASP A 81 -158.13 -83.36 REMARK 500 2 ASP A 90 43.62 -161.52 REMARK 500 2 LYS A 96 148.13 179.45 REMARK 500 2 ASP A 97 -89.82 46.67 REMARK 500 2 ASP A 98 15.31 -141.03 REMARK 500 3 THR A 3 -76.65 61.72 REMARK 500 3 LEU A 6 171.92 60.86 REMARK 500 3 CYS A 23 170.98 -47.54 REMARK 500 3 ASN A 31 66.36 -152.94 REMARK 500 3 LEU A 36 -66.93 -90.85 REMARK 500 3 ALA A 72 66.35 61.72 REMARK 500 3 ASP A 81 -158.13 -75.10 REMARK 500 3 LEU A 89 136.78 -177.88 REMARK 500 3 ASP A 90 48.74 -140.46 REMARK 500 3 LYS A 96 144.42 179.61 REMARK 500 3 ASP A 97 -89.77 48.56 REMARK 500 4 LEU A 2 172.96 59.83 REMARK 500 4 ALA A 7 60.32 60.12 REMARK 500 4 ALA A 8 110.39 71.45 REMARK 500 4 ASN A 31 69.79 -153.63 REMARK 500 4 THR A 37 165.85 176.28 REMARK 500 4 PHE A 71 -85.55 48.05 REMARK 500 4 ASP A 81 -159.97 -81.71 REMARK 500 4 LEU A 89 119.00 -177.92 REMARK 500 4 LYS A 96 143.74 179.69 REMARK 500 4 ASP A 97 -89.43 48.58 REMARK 500 4 ASP A 98 15.14 -140.01 REMARK 500 5 LEU A 2 177.12 60.90 REMARK 500 5 LEU A 6 153.16 60.42 REMARK 500 5 ALA A 8 160.77 173.02 REMARK 500 5 CYS A 23 170.12 -46.22 REMARK 500 5 ASN A 31 75.37 -158.85 REMARK 500 REMARK 500 THIS ENTRY HAS 251 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16977 RELATED DB: BMRB REMARK 900 NMR ASSIGNMENT DBREF 2L8K A 2 123 UNP P19811 RPOA_EAVBU 1454 1575 SEQADV 2L8K GLY A 1 UNP P19811 EXPRESSION TAG SEQRES 1 A 123 GLY LEU THR ALA THR LEU ALA ALA LEU THR ASP ASP ASP SEQRES 2 A 123 PHE GLN PHE LEU SER ASP VAL LEU ASP CYS ARG ALA VAL SEQRES 3 A 123 ARG SER ALA MET ASN LEU ARG ALA ALA LEU THR SER PHE SEQRES 4 A 123 GLN VAL ALA GLN TYR ARG ASN ILE LEU ASN ALA SER LEU SEQRES 5 A 123 GLN VAL ASP ARG ASP ALA ALA ARG SER ARG ARG LEU MET SEQRES 6 A 123 ALA LYS LEU ALA ASP PHE ALA VAL GLU GLN GLU VAL THR SEQRES 7 A 123 ALA GLY ASP ARG VAL VAL VAL ILE ASP GLY LEU ASP ARG SEQRES 8 A 123 MET ALA HIS PHE LYS ASP ASP LEU VAL LEU VAL PRO LEU SEQRES 9 A 123 THR THR LYS VAL VAL GLY GLY SER ARG CYS THR ILE CYS SEQRES 10 A 123 ASP VAL VAL LYS GLU GLU HELIX 1 1 THR A 10 CYS A 23 1 14 HELIX 2 2 SER A 28 LEU A 32 5 5 HELIX 3 3 THR A 37 ASP A 55 1 19 HELIX 4 4 ASP A 57 ALA A 69 1 13 SHEET 1 A 5 ALA A 25 ARG A 27 0 SHEET 2 A 5 ARG A 82 VAL A 85 1 O VAL A 84 N ALA A 25 SHEET 3 A 5 ARG A 113 LYS A 121 -1 O THR A 115 N VAL A 85 SHEET 4 A 5 LEU A 99 VAL A 108 -1 N VAL A 100 O VAL A 120 SHEET 5 A 5 ALA A 93 LYS A 96 -1 N ALA A 93 O LEU A 101 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1