data_2L8Y # _entry.id 2L8Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2L8Y pdb_00002l8y 10.2210/pdb2l8y/pdb RCSB RCSB102105 ? ? BMRB 17431 ? ? WWPDB D_1000102105 ? ? # _pdbx_database_related.db_id 17431 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L8Y _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-01-27 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rogov, V.V.' 1 'Rogova, N.Y.' 2 'Bernhard, F.' 3 'Lohr, F.' 4 'Doetsch, V.' 5 # _citation.id primary _citation.title ;A disulfide bridge network within the soluble periplasmic domain determines structure and function of the outer membrane protein RCSF. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 18775 _citation.page_last 18783 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21471196 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.230185 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rogov, V.V.' 1 ? primary 'Rogova, N.Y.' 2 ? primary 'Bernhard, F.' 3 ? primary 'Lohr, F.' 4 ? primary 'Dotsch, V.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protein rcsF' _entity.formula_weight 11136.781 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'periplasmatic domain, Residues 31-134' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSC EVTSGTPGCYRQAVCIGSALNITAK ; _entity_poly.pdbx_seq_one_letter_code_can ;MAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSC EVTSGTPGCYRQAVCIGSALNITAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 PRO n 1 4 GLN n 1 5 PRO n 1 6 LYS n 1 7 ALA n 1 8 GLU n 1 9 PRO n 1 10 ALA n 1 11 LYS n 1 12 PRO n 1 13 LYS n 1 14 ALA n 1 15 PRO n 1 16 ARG n 1 17 ALA n 1 18 THR n 1 19 PRO n 1 20 VAL n 1 21 ARG n 1 22 ILE n 1 23 TYR n 1 24 THR n 1 25 ASN n 1 26 ALA n 1 27 GLU n 1 28 GLU n 1 29 LEU n 1 30 VAL n 1 31 GLY n 1 32 LYS n 1 33 PRO n 1 34 PHE n 1 35 ARG n 1 36 ASP n 1 37 LEU n 1 38 GLY n 1 39 GLU n 1 40 VAL n 1 41 SER n 1 42 GLY n 1 43 ASP n 1 44 SER n 1 45 CYS n 1 46 GLN n 1 47 ALA n 1 48 SER n 1 49 ASN n 1 50 GLN n 1 51 ASP n 1 52 SER n 1 53 PRO n 1 54 PRO n 1 55 SER n 1 56 ILE n 1 57 PRO n 1 58 THR n 1 59 ALA n 1 60 ARG n 1 61 LYS n 1 62 ARG n 1 63 MET n 1 64 GLN n 1 65 ILE n 1 66 ASN n 1 67 ALA n 1 68 SER n 1 69 LYS n 1 70 MET n 1 71 LYS n 1 72 ALA n 1 73 ASN n 1 74 ALA n 1 75 VAL n 1 76 LEU n 1 77 LEU n 1 78 HIS n 1 79 SER n 1 80 CYS n 1 81 GLU n 1 82 VAL n 1 83 THR n 1 84 SER n 1 85 GLY n 1 86 THR n 1 87 PRO n 1 88 GLY n 1 89 CYS n 1 90 TYR n 1 91 ARG n 1 92 GLN n 1 93 ALA n 1 94 VAL n 1 95 CYS n 1 96 ILE n 1 97 GLY n 1 98 SER n 1 99 ALA n 1 100 LEU n 1 101 ASN n 1 102 ILE n 1 103 THR n 1 104 ALA n 1 105 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene rcsF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'NEB T7 express' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector p60m _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RCSF_ECOLI _struct_ref.pdbx_db_accession P69411 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCE VTSGTPGCYRQAVCIGSALNITAK ; _struct_ref.pdbx_align_begin 31 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2L8Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P69411 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 134 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 134 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2L8Y _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P69411 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 30 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 1 '2D 1H-13C HSQC aromatic' 1 4 1 '3D HNCACB' 1 5 1 '3D HNCO' 1 6 1 '3D (HCA)CO(CA)NH' 1 7 1 '3D H(CC)(CO)NH-TOCSY' 1 8 1 '3D (H)CC(CO)NH-TOCSY' 1 9 1 '3D 1H-13C NOESY aliphatic' 1 10 1 '2D 1H-13C NOESY aromatic' 1 11 1 '3D 1H-15N NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.100 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.6mM [U-98% 13C; U-98% 15N] RcsF(31-134); 50mM sodium phosphate; 100mM sodium chloride; 4.6mM protease inhibitors cocktail; 0.3mM DSS; 95% H2O/5% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' 700 Bruker AVANCE 3 'Bruker Avance' 600 Bruker AVANCE 4 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2L8Y _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 25 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L8Y _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 23 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L8Y _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Bruker Biospin' collection TopSpin 1 2. 'Bruker Biospin' processing TopSpin 2 2. Goddard 'data analysis' Sparky 3 112 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 4 1.0.5 ;Linge, O'Donoghue and Nilges ; refinement ARIA 5 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'NMR structure of periplasmatic domain of the E. coli outer membrane protein RcsF (residues 30-134)' _exptl.entry_id 2L8Y _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L8Y _struct.title 'Solution structure of the E. coli outer membrane protein RcsF (periplasmatic domain)' _struct.pdbx_model_details 'closest to the average' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L8Y _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'two component system, RcsF, rcs signalling system, disulphide bridges, exopolysaccharide biosynthesis, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 25 ? GLY A 31 ? ASN A 54 GLY A 60 1 ? 7 HELX_P HELX_P2 2 SER A 55 ? LYS A 69 ? SER A 84 LYS A 98 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 89 SG ? ? A CYS 74 A CYS 118 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 80 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 109 A CYS 124 1_555 ? ? ? ? ? ? ? 2.033 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 21 ? TYR A 23 ? ARG A 50 TYR A 52 A 2 ALA A 74 ? THR A 86 ? ALA A 103 THR A 115 A 3 CYS A 89 ? ILE A 102 ? CYS A 118 ILE A 131 A 4 PHE A 34 ? GLN A 46 ? PHE A 63 GLN A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 23 ? N TYR A 52 O VAL A 75 ? O VAL A 104 A 2 3 N THR A 83 ? N THR A 112 O GLN A 92 ? O GLN A 121 A 3 4 O CYS A 95 ? O CYS A 124 N GLY A 42 ? N GLY A 71 # _atom_sites.entry_id 2L8Y _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 30 30 MET MET A . n A 1 2 ALA 2 31 31 ALA ALA A . n A 1 3 PRO 3 32 32 PRO PRO A . n A 1 4 GLN 4 33 33 GLN GLN A . n A 1 5 PRO 5 34 34 PRO PRO A . n A 1 6 LYS 6 35 35 LYS LYS A . n A 1 7 ALA 7 36 36 ALA ALA A . n A 1 8 GLU 8 37 37 GLU GLU A . n A 1 9 PRO 9 38 38 PRO PRO A . n A 1 10 ALA 10 39 39 ALA ALA A . n A 1 11 LYS 11 40 40 LYS LYS A . n A 1 12 PRO 12 41 41 PRO PRO A . n A 1 13 LYS 13 42 42 LYS LYS A . n A 1 14 ALA 14 43 43 ALA ALA A . n A 1 15 PRO 15 44 44 PRO PRO A . n A 1 16 ARG 16 45 45 ARG ARG A . n A 1 17 ALA 17 46 46 ALA ALA A . n A 1 18 THR 18 47 47 THR THR A . n A 1 19 PRO 19 48 48 PRO PRO A . n A 1 20 VAL 20 49 49 VAL VAL A . n A 1 21 ARG 21 50 50 ARG ARG A . n A 1 22 ILE 22 51 51 ILE ILE A . n A 1 23 TYR 23 52 52 TYR TYR A . n A 1 24 THR 24 53 53 THR THR A . n A 1 25 ASN 25 54 54 ASN ASN A . n A 1 26 ALA 26 55 55 ALA ALA A . n A 1 27 GLU 27 56 56 GLU GLU A . n A 1 28 GLU 28 57 57 GLU GLU A . n A 1 29 LEU 29 58 58 LEU LEU A . n A 1 30 VAL 30 59 59 VAL VAL A . n A 1 31 GLY 31 60 60 GLY GLY A . n A 1 32 LYS 32 61 61 LYS LYS A . n A 1 33 PRO 33 62 62 PRO PRO A . n A 1 34 PHE 34 63 63 PHE PHE A . n A 1 35 ARG 35 64 64 ARG ARG A . n A 1 36 ASP 36 65 65 ASP ASP A . n A 1 37 LEU 37 66 66 LEU LEU A . n A 1 38 GLY 38 67 67 GLY GLY A . n A 1 39 GLU 39 68 68 GLU GLU A . n A 1 40 VAL 40 69 69 VAL VAL A . n A 1 41 SER 41 70 70 SER SER A . n A 1 42 GLY 42 71 71 GLY GLY A . n A 1 43 ASP 43 72 72 ASP ASP A . n A 1 44 SER 44 73 73 SER SER A . n A 1 45 CYS 45 74 74 CYS CYS A . n A 1 46 GLN 46 75 75 GLN GLN A . n A 1 47 ALA 47 76 76 ALA ALA A . n A 1 48 SER 48 77 77 SER SER A . n A 1 49 ASN 49 78 78 ASN ASN A . n A 1 50 GLN 50 79 79 GLN GLN A . n A 1 51 ASP 51 80 80 ASP ASP A . n A 1 52 SER 52 81 81 SER SER A . n A 1 53 PRO 53 82 82 PRO PRO A . n A 1 54 PRO 54 83 83 PRO PRO A . n A 1 55 SER 55 84 84 SER SER A . n A 1 56 ILE 56 85 85 ILE ILE A . n A 1 57 PRO 57 86 86 PRO PRO A . n A 1 58 THR 58 87 87 THR THR A . n A 1 59 ALA 59 88 88 ALA ALA A . n A 1 60 ARG 60 89 89 ARG ARG A . n A 1 61 LYS 61 90 90 LYS LYS A . n A 1 62 ARG 62 91 91 ARG ARG A . n A 1 63 MET 63 92 92 MET MET A . n A 1 64 GLN 64 93 93 GLN GLN A . n A 1 65 ILE 65 94 94 ILE ILE A . n A 1 66 ASN 66 95 95 ASN ASN A . n A 1 67 ALA 67 96 96 ALA ALA A . n A 1 68 SER 68 97 97 SER SER A . n A 1 69 LYS 69 98 98 LYS LYS A . n A 1 70 MET 70 99 99 MET MET A . n A 1 71 LYS 71 100 100 LYS LYS A . n A 1 72 ALA 72 101 101 ALA ALA A . n A 1 73 ASN 73 102 102 ASN ASN A . n A 1 74 ALA 74 103 103 ALA ALA A . n A 1 75 VAL 75 104 104 VAL VAL A . n A 1 76 LEU 76 105 105 LEU LEU A . n A 1 77 LEU 77 106 106 LEU LEU A . n A 1 78 HIS 78 107 107 HIS HIS A . n A 1 79 SER 79 108 108 SER SER A . n A 1 80 CYS 80 109 109 CYS CYS A . n A 1 81 GLU 81 110 110 GLU GLU A . n A 1 82 VAL 82 111 111 VAL VAL A . n A 1 83 THR 83 112 112 THR THR A . n A 1 84 SER 84 113 113 SER SER A . n A 1 85 GLY 85 114 114 GLY GLY A . n A 1 86 THR 86 115 115 THR THR A . n A 1 87 PRO 87 116 116 PRO PRO A . n A 1 88 GLY 88 117 117 GLY GLY A . n A 1 89 CYS 89 118 118 CYS CYS A . n A 1 90 TYR 90 119 119 TYR TYR A . n A 1 91 ARG 91 120 120 ARG ARG A . n A 1 92 GLN 92 121 121 GLN GLN A . n A 1 93 ALA 93 122 122 ALA ALA A . n A 1 94 VAL 94 123 123 VAL VAL A . n A 1 95 CYS 95 124 124 CYS CYS A . n A 1 96 ILE 96 125 125 ILE ILE A . n A 1 97 GLY 97 126 126 GLY GLY A . n A 1 98 SER 98 127 127 SER SER A . n A 1 99 ALA 99 128 128 ALA ALA A . n A 1 100 LEU 100 129 129 LEU LEU A . n A 1 101 ASN 101 130 130 ASN ASN A . n A 1 102 ILE 102 131 131 ILE ILE A . n A 1 103 THR 103 132 132 THR THR A . n A 1 104 ALA 104 133 133 ALA ALA A . n A 1 105 LYS 105 134 134 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-09-07 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_nmr_spectrometer 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' 6 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.0138 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.0009 _pdbx_nmr_ensemble_rms.entry_id 2L8Y _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'RcsF(31-134)-1' 0.6 ? mM '[U-98% 13C; U-98% 15N]' 1 'sodium phosphate-2' 50 ? mM ? 1 'sodium chloride-3' 100 ? mM ? 1 'protease inhibitors cocktail-4' 4.6 ? mM ? 1 DSS-5 0.3 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count 12 _pdbx_nmr_constraints.entry_id 2L8Y _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 88 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1195 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 194 _pdbx_nmr_constraints.NOE_long_range_total_count 582 _pdbx_nmr_constraints.NOE_medium_range_total_count 225 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 282 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 64 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 65 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 HG3 A PRO 83 ? ? HB3 A ARG 120 ? ? 1.26 2 3 OE1 A GLU 68 ? ? HG A SER 127 ? ? 1.59 3 5 OE1 A GLU 68 ? ? HG A SER 127 ? ? 1.57 4 8 HG22 A VAL 69 ? ? HB3 A ASN 95 ? ? 1.31 5 9 HH A TYR 52 ? ? OE1 A GLU 57 ? ? 1.59 6 13 OE1 A GLU 68 ? ? HG A SER 127 ? ? 1.58 7 15 OE1 A GLU 57 ? ? HZ3 A LYS 61 ? ? 1.59 8 16 HG3 A PRO 83 ? ? HB3 A ARG 120 ? ? 1.30 9 17 HG21 A VAL 69 ? ? HB3 A ASN 95 ? ? 1.30 10 19 OE1 A GLU 57 ? ? HZ2 A LYS 61 ? ? 1.60 11 24 OE2 A GLU 68 ? ? HG A SER 127 ? ? 1.57 12 24 HZ3 A LYS 35 ? ? OE1 A GLU 37 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 66 ? ? -118.89 -73.81 2 1 ASP A 80 ? ? -74.84 -168.97 3 2 LEU A 66 ? ? -136.70 -69.79 4 2 ASP A 80 ? ? -127.01 -148.84 5 2 PRO A 83 ? ? -85.86 49.12 6 2 HIS A 107 ? ? -103.00 -63.63 7 3 PRO A 48 ? ? -71.80 -77.63 8 3 LEU A 66 ? ? -92.44 -62.61 9 3 ASP A 80 ? ? -97.94 -155.63 10 3 HIS A 107 ? ? -105.72 -71.92 11 3 PRO A 116 ? ? -69.90 59.19 12 3 THR A 132 ? ? -92.27 57.59 13 4 LYS A 35 ? ? -157.62 74.59 14 4 ARG A 45 ? ? -156.99 48.46 15 4 THR A 47 ? ? 57.36 83.40 16 4 THR A 53 ? ? -109.07 43.16 17 4 PRO A 62 ? ? -66.65 94.61 18 4 ILE A 131 ? ? -69.61 93.58 19 5 PRO A 32 ? ? -77.96 -169.19 20 5 ALA A 46 ? ? -134.58 -101.90 21 5 LEU A 66 ? ? -103.27 -70.74 22 5 PRO A 83 ? ? -62.55 90.12 23 5 HIS A 107 ? ? -105.90 -67.13 24 5 VAL A 111 ? ? -107.89 79.63 25 6 LYS A 35 ? ? -102.31 76.53 26 6 LEU A 66 ? ? -99.58 -79.08 27 6 GLN A 79 ? ? -92.63 50.98 28 6 ASP A 80 ? ? -118.08 -162.05 29 6 PRO A 83 ? ? -81.83 46.14 30 6 HIS A 107 ? ? -102.44 -77.44 31 7 ARG A 45 ? ? -155.00 88.34 32 7 THR A 47 ? ? 52.30 92.54 33 7 PRO A 62 ? ? -68.87 78.49 34 7 LEU A 66 ? ? -104.04 -79.18 35 7 LYS A 100 ? ? 75.98 -8.29 36 7 HIS A 107 ? ? -106.39 -65.39 37 7 PRO A 116 ? ? -59.95 105.74 38 8 THR A 53 ? ? -109.49 47.31 39 8 PRO A 62 ? ? -66.65 84.83 40 8 LEU A 66 ? ? -108.24 -77.74 41 8 HIS A 107 ? ? -103.46 -76.23 42 8 ALA A 133 ? ? -115.53 -72.90 43 10 SER A 77 ? ? -163.00 -160.26 44 10 ASP A 80 ? ? -85.77 -158.76 45 10 HIS A 107 ? ? -93.48 -61.96 46 10 THR A 132 ? ? -111.97 77.71 47 11 THR A 47 ? ? 68.91 105.37 48 11 PRO A 48 ? ? -75.62 -74.54 49 11 PRO A 62 ? ? -66.86 94.06 50 11 ASP A 80 ? ? -105.12 -167.81 51 11 HIS A 107 ? ? -104.10 -70.30 52 12 PRO A 62 ? ? -65.74 91.37 53 12 LEU A 66 ? ? -96.92 -78.42 54 12 ASP A 80 ? ? -87.87 -150.53 55 12 LYS A 100 ? ? 157.22 -35.62 56 13 LYS A 35 ? ? -163.40 93.71 57 13 LEU A 66 ? ? -96.90 -65.85 58 13 GLN A 75 ? ? -119.33 79.16 59 13 CYS A 109 ? ? -151.50 68.06 60 13 ALA A 133 ? ? -65.59 -77.94 61 14 THR A 47 ? ? 71.22 102.99 62 14 THR A 53 ? ? -144.39 34.82 63 14 LEU A 66 ? ? -120.02 -82.08 64 14 THR A 132 ? ? -115.85 65.57 65 15 THR A 47 ? ? 56.22 75.28 66 15 LEU A 66 ? ? -91.12 -67.05 67 15 PRO A 83 ? ? -68.47 94.11 68 15 HIS A 107 ? ? -108.33 -71.14 69 15 CYS A 109 ? ? -101.79 73.71 70 16 PRO A 44 ? ? -85.59 -145.00 71 16 THR A 53 ? ? -142.58 16.56 72 16 HIS A 107 ? ? -109.64 -61.17 73 17 ASP A 80 ? ? -107.54 -161.33 74 17 HIS A 107 ? ? -106.03 -66.43 75 17 THR A 132 ? ? -102.89 72.91 76 17 ALA A 133 ? ? -87.48 34.92 77 18 PRO A 48 ? ? -64.20 -78.75 78 18 LEU A 66 ? ? -94.65 -70.52 79 19 ALA A 46 ? ? -154.68 -66.20 80 19 THR A 53 ? ? -98.73 38.44 81 19 LEU A 66 ? ? -137.08 -66.69 82 19 SER A 73 ? ? -150.47 75.59 83 19 PRO A 83 ? ? -63.69 99.72 84 19 CYS A 109 ? ? -152.89 85.21 85 20 PRO A 44 ? ? -78.57 -93.43 86 20 ARG A 45 ? ? -171.02 -170.09 87 20 PRO A 62 ? ? -68.80 78.72 88 20 LEU A 66 ? ? -92.21 -67.53 89 20 ALA A 133 ? ? -92.95 -83.46 90 21 PRO A 32 ? ? -69.88 97.71 91 21 ALA A 46 ? ? -117.85 -89.42 92 21 LEU A 66 ? ? -132.20 -89.81 93 21 HIS A 107 ? ? -123.89 -88.93 94 22 PRO A 44 ? ? -79.55 -126.75 95 22 SER A 73 ? ? -108.99 73.20 96 22 HIS A 107 ? ? -105.35 -63.55 97 22 PRO A 116 ? ? -56.32 108.94 98 23 THR A 47 ? ? 68.62 112.87 99 23 THR A 53 ? ? -141.39 35.96 100 23 PRO A 62 ? ? -66.45 87.29 101 23 SER A 113 ? ? -106.44 78.76 102 24 PRO A 32 ? ? -85.22 -159.74 103 24 HIS A 107 ? ? -121.56 -57.17 104 24 CYS A 109 ? ? -109.45 79.96 105 24 PRO A 116 ? ? -60.45 97.04 106 25 PRO A 44 ? ? -80.52 -127.39 107 25 LEU A 66 ? ? -122.27 -59.28 108 25 GLN A 79 ? ? -94.98 31.64 109 25 LYS A 100 ? ? 156.21 -19.91 110 25 PRO A 116 ? ? -69.32 75.36 #