HEADER TRANSCRIPTION 23-FEB-11 2L9S TITLE SOLUTION STRUCTURE OF PF1 SID1-MSIN3A PAH2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHD FINGER PROTEIN 12; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 200-241; COMPND 5 SYNONYM: PHD FACTOR 1, PF1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PAIRED AMPHIPATHIC HELIX PROTEIN SIN3A; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: PAH 2 DOMAIN RESIDUES 295-385; COMPND 11 SYNONYM: HISTONE DEACETYLASE COMPLEX SUBUNIT SIN3A, TRANSCRIPTIONAL COMPND 12 COREPRESSOR SIN3A; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1523, PF1, PHF12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PMCSG7; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: KIAA4126, SIN3A; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PMCSG21 KEYWDS PROTEIN-PEPTIDE COMPLEX, AMPHIPATHIC HELIX MOTIF, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.SENTHIL KUMAR,T.XIE,Y.ZHANG,I.RADHAKRISHNAN REVDAT 3 15-MAY-24 2L9S 1 REMARK REVDAT 2 14-JUN-23 2L9S 1 SEQADV REVDAT 1 11-MAY-11 2L9S 0 JRNL AUTH G.S.KUMAR,T.XIE,Y.ZHANG,I.RADHAKRISHNAN JRNL TITL SOLUTION STRUCTURE OF THE MSIN3A PAH2-PF1 SID1 COMPLEX: A JRNL TITL 2 MAD1/MXD1-LIKE INTERACTION DISRUPTED BY MRG15 IN THE JRNL TITL 3 RPD3S/SIN3S COMPLEX. JRNL REF J.MOL.BIOL. V. 408 987 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21440557 JRNL DOI 10.1016/J.JMB.2011.03.043 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2, ARIA 1.2, ARIA 1.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE, REMARK 3 O'DONOGHUE AND NILGES (ARIA), BRUNGER, ADAMS, REMARK 3 CLORE, GROS, NILGES AND READ (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATER REFINEMENT REMARK 4 REMARK 4 2L9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000102135. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.00 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.75-1.5 MM [U-100% 13C; U-100% REMARK 210 15N] PEPTIDE, 0.75-1.5 MM [U-100% REMARK 210 13C; U-100% 15N] PROTEIN, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY ALIPHATIC; 3D 1H REMARK 210 -15N NOESY; 3D HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 1.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 205 77.87 -118.38 REMARK 500 1 PRO A 222 25.87 -71.67 REMARK 500 1 THR A 223 79.99 32.46 REMARK 500 1 PHE A 225 28.01 -76.09 REMARK 500 1 PRO A 228 102.97 -50.00 REMARK 500 1 ASN A 229 -75.48 -80.52 REMARK 500 1 GLU A 230 124.30 -175.47 REMARK 500 1 ASN B 293 -80.77 -106.30 REMARK 500 1 ALA B 294 13.14 59.21 REMARK 500 1 LEU B 296 95.62 69.06 REMARK 500 1 ASN B 368 -56.68 72.57 REMARK 500 1 LEU B 380 67.71 -167.77 REMARK 500 2 ALA A 199 87.86 60.97 REMARK 500 2 TYR A 201 91.45 62.29 REMARK 500 2 THR A 223 87.64 36.75 REMARK 500 2 GLN A 224 39.77 -80.43 REMARK 500 2 PRO A 228 44.65 -81.32 REMARK 500 2 SER A 240 -70.99 -94.24 REMARK 500 2 ASN B 293 92.25 64.12 REMARK 500 2 LEU B 296 -165.57 64.15 REMARK 500 2 GLN B 297 -97.55 -151.59 REMARK 500 2 ASN B 368 -55.34 75.50 REMARK 500 2 ASN B 384 85.53 54.27 REMARK 500 3 ALA A 199 169.52 68.71 REMARK 500 3 LEU A 206 -41.83 -160.84 REMARK 500 3 ARG A 207 -73.22 66.02 REMARK 500 3 GLN A 224 -75.08 -80.07 REMARK 500 3 PHE A 225 -53.39 61.88 REMARK 500 3 THR A 232 38.60 -80.90 REMARK 500 3 THR A 234 -64.06 -104.66 REMARK 500 3 LEU B 296 78.27 55.11 REMARK 500 3 THR B 350 88.53 67.53 REMARK 500 3 LYS B 367 -81.49 65.43 REMARK 500 3 ASN B 368 25.02 -145.98 REMARK 500 3 GLN B 369 83.85 -66.85 REMARK 500 4 ASN A 198 -31.24 -135.10 REMARK 500 4 ARG A 207 78.21 -113.65 REMARK 500 4 PRO A 222 7.60 -68.27 REMARK 500 4 THR A 223 97.70 43.59 REMARK 500 4 PRO A 228 88.03 -67.91 REMARK 500 4 ALA B 294 170.63 66.48 REMARK 500 4 SER B 295 -165.29 -163.76 REMARK 500 4 GLN B 297 -86.49 64.46 REMARK 500 4 ASN B 299 -77.24 -81.08 REMARK 500 4 GLN B 321 79.23 -119.13 REMARK 500 4 THR B 350 142.21 56.34 REMARK 500 4 PHE B 366 46.77 -87.34 REMARK 500 4 ASP B 382 -7.53 72.84 REMARK 500 5 ASN A 198 -11.20 72.29 REMARK 500 5 GLN A 203 71.58 -151.06 REMARK 500 REMARK 500 THIS ENTRY HAS 224 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1S5Q RELATED DB: PDB REMARK 900 RELATED ID: 1S5R RELATED DB: PDB REMARK 900 RELATED ID: 17485 RELATED DB: BMRB DBREF 2L9S A 200 241 UNP Q96QT6 PHF12_HUMAN 200 241 DBREF 2L9S B 295 385 UNP Q60520 SIN3A_MOUSE 295 385 SEQADV 2L9S SER A 197 UNP Q96QT6 EXPRESSION TAG SEQADV 2L9S ASN A 198 UNP Q96QT6 EXPRESSION TAG SEQADV 2L9S ALA A 199 UNP Q96QT6 EXPRESSION TAG SEQADV 2L9S SER B 292 UNP Q60520 EXPRESSION TAG SEQADV 2L9S ASN B 293 UNP Q60520 EXPRESSION TAG SEQADV 2L9S ALA B 294 UNP Q60520 EXPRESSION TAG SEQRES 1 A 45 SER ASN ALA ASP TYR VAL GLN PRO GLN LEU ARG ARG PRO SEQRES 2 A 45 PHE GLU LEU LEU ILE ALA ALA ALA MET GLU ARG ASN PRO SEQRES 3 A 45 THR GLN PHE GLN LEU PRO ASN GLU LEU THR CYS THR THR SEQRES 4 A 45 ALA LEU PRO GLY SER SER SEQRES 1 B 94 SER ASN ALA SER LEU GLN ASN ASN GLN PRO VAL GLU PHE SEQRES 2 B 94 ASN HIS ALA ILE ASN TYR VAL ASN LYS ILE LYS ASN ARG SEQRES 3 B 94 PHE GLN GLY GLN PRO ASP ILE TYR LYS ALA PHE LEU GLU SEQRES 4 B 94 ILE LEU HIS THR TYR GLN LYS GLU GLN ARG ASN ALA LYS SEQRES 5 B 94 GLU ALA GLY GLY ASN TYR THR PRO ALA LEU THR GLU GLN SEQRES 6 B 94 GLU VAL TYR ALA GLN VAL ALA ARG LEU PHE LYS ASN GLN SEQRES 7 B 94 GLU ASP LEU LEU SER GLU PHE GLY GLN PHE LEU PRO ASP SEQRES 8 B 94 ALA ASN SER HELIX 1 1 PRO A 209 GLU A 219 1 11 HELIX 2 2 VAL B 302 ARG B 317 1 16 HELIX 3 3 PRO B 322 GLU B 344 1 23 HELIX 4 4 GLU B 355 LEU B 365 1 11 HELIX 5 5 GLU B 370 PHE B 376 1 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1