HEADER ANTIMICROBIAL PROTEIN 01-MAR-11 2LA2 TITLE SOLUTION STRUCTURE OF PAPILIOCIN ISOLATED FROM THE SWALLOWTAIL TITLE 2 BUTTERFLY, PAPILIO XUTHUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CECROPIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES IN UNP, 25-61; COMPND 5 SYNONYM: PAPILIOCIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: PAPILIO XUTHUS; SOURCE 4 ORGANISM_TAXID: 66420; SOURCE 5 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS ANTIMICROBIAL PEPTIDE, PAPILIOCIN, CECROPIN-LIKE PEPTIDE, ANTI- KEYWDS 2 INFLAMMATORY ACTIVITY, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.KIM,J.KIM REVDAT 2 14-JUN-23 2LA2 1 REMARK SEQADV LINK REVDAT 1 28-SEP-11 2LA2 0 JRNL AUTH J.-K.KIM,E.LEE,S.SHIN,K.-W.JEONG,J.-Y.LEE,S.-Y.BAE,S.-H.KIM, JRNL AUTH 2 J.LEE,S.R.KIM,D.G.LEE,J.-S.HWANG,Y.KIM JRNL TITL STRUCTURE AND FUNCTION OF PAPILIOCIN WITH ANTIMICROBIAL AND JRNL TITL 2 ANTI-INFLAMMATORY ACTIVITIES ISOLATED FROM THE SWALLOWTAIL JRNL TITL 3 BUTTERFLY, PAPILIO XUTHUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000102145. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1MM PAPILIOCIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY; REMARK 210 2D DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 2 -53.12 -137.52 REMARK 500 1 ALA A 22 -67.85 -97.38 REMARK 500 2 TRP A 2 -59.77 -149.15 REMARK 500 2 LYS A 21 -73.03 -53.66 REMARK 500 2 ALA A 22 -75.05 -92.27 REMARK 500 3 TRP A 2 98.16 62.21 REMARK 500 3 PRO A 24 90.98 -69.80 REMARK 500 4 TRP A 2 -50.48 -130.85 REMARK 500 4 LYS A 21 -72.06 -68.04 REMARK 500 5 ALA A 22 -75.56 -51.80 REMARK 500 6 LYS A 21 -71.41 -52.69 REMARK 500 6 ALA A 22 -75.53 -92.96 REMARK 500 7 ALA A 22 -75.38 -95.87 REMARK 500 8 ALA A 22 -74.05 -52.09 REMARK 500 9 TRP A 2 -52.21 -163.11 REMARK 500 9 LYS A 3 -74.70 -51.79 REMARK 500 9 LYS A 21 -70.61 -71.55 REMARK 500 9 ALA A 22 -74.08 -89.25 REMARK 500 10 LYS A 21 -71.06 -51.91 REMARK 500 10 ALA A 22 -69.08 -99.63 REMARK 500 11 LYS A 21 -71.12 -51.94 REMARK 500 11 ALA A 22 -69.70 -92.22 REMARK 500 12 ALA A 22 -71.39 -76.18 REMARK 500 12 PRO A 24 94.86 -69.85 REMARK 500 13 TRP A 2 -40.81 -176.47 REMARK 500 13 LYS A 21 -70.23 -55.58 REMARK 500 13 ALA A 22 -74.78 -90.06 REMARK 500 13 PRO A 24 -174.65 -69.73 REMARK 500 14 LYS A 3 -74.52 -51.93 REMARK 500 14 ALA A 22 -72.61 -93.44 REMARK 500 14 PRO A 24 79.64 -69.80 REMARK 500 15 TRP A 2 -45.07 -167.55 REMARK 500 15 LYS A 21 -71.54 -51.91 REMARK 500 15 ALA A 22 -63.89 -99.24 REMARK 500 16 ALA A 22 -75.60 -92.68 REMARK 500 16 PRO A 24 99.79 -69.79 REMARK 500 17 LYS A 3 -74.57 -51.82 REMARK 500 17 LYS A 21 -74.44 -53.40 REMARK 500 17 ALA A 22 -75.73 -99.99 REMARK 500 18 LYS A 21 -74.22 -54.89 REMARK 500 18 ALA A 22 -75.52 -86.80 REMARK 500 18 PRO A 24 82.24 -69.77 REMARK 500 19 LYS A 21 -72.42 -71.77 REMARK 500 19 ALA A 22 -75.71 -80.91 REMARK 500 19 PRO A 24 79.31 -69.77 REMARK 500 20 LYS A 3 -74.08 -55.46 REMARK 500 20 LYS A 21 -74.11 -64.38 REMARK 500 20 ALA A 22 -75.59 -97.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17500 RELATED DB: BMRB DBREF 2LA2 A 1 37 UNP D8L127 D8L127_9NEOP 25 61 SEQADV 2LA2 NH2 A 38 UNP D8L127 AMIDATION SEQRES 1 A 38 ARG TRP LYS ILE PHE LYS LYS ILE GLU LYS VAL GLY ARG SEQRES 2 A 38 ASN VAL ARG ASP GLY ILE ILE LYS ALA GLY PRO ALA VAL SEQRES 3 A 38 ALA VAL VAL GLY GLN ALA ALA THR VAL VAL LYS NH2 HET NH2 A 38 2 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 1 TRP A 2 ALA A 22 1 21 HELIX 2 2 ALA A 25 LYS A 37 1 13 LINK C LYS A 37 N NH2 A 38 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1