HEADER PROTEIN BINDING 11-APR-11 2LC0 TITLE RV0020C_NTER STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN TB39.8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-132; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV0020C, TB39.8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET15B-TEV KEYWDS FHAA, KINASE SUBSTRATE, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR P.P.BARTHE,M.M.COHEN-GONSAUD,C.ROUMESTAND REVDAT 2 14-JUN-23 2LC0 1 REMARK REVDAT 1 02-NOV-11 2LC0 0 JRNL AUTH C.ROUMESTAND,J.LEIBA,N.GALOPHE,E.MARGEAT,A.PADILLA,Y.BESSIN, JRNL AUTH 2 P.BARTHE,V.MOLLE,M.COHEN-GONSAUD JRNL TITL STRUCTURAL INSIGHT INTO THE MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 RV0020C PROTEIN AND ITS INTERACTION WITH THE PKNB KINASE JRNL REF STRUCTURE V. 19 1525 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 22000520 JRNL DOI 10.1016/J.STR.2011.07.011 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GIFA 4.44, CNS 1.2 REMARK 3 AUTHORS : DELSUC (GIFA), BRUNGER, ADAMS, CLORE, GROS, NILGES REMARK 3 AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WATER REFINEMENT WITH RECOORD SCRIPTS REMARK 4 REMARK 4 2LC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000102210. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-15N] RV0020C_NTER-1, REMARK 210 95% H2O/5% D2O; 0.5 MM [U-13C; U- REMARK 210 15N] RV0020C_NTER-2, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-15N REMARK 210 TOCSY; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HNCO; 3D HCACO REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, TALOS+ 1.2009.0721.18 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 9 93.66 -67.39 REMARK 500 1 LEU A 51 -164.78 -122.56 REMARK 500 2 SER A 30 -150.00 -103.14 REMARK 500 3 ARG A 13 -92.67 -89.88 REMARK 500 3 LYS A 14 141.12 -178.53 REMARK 500 4 LEU A 15 -76.49 -93.71 REMARK 500 4 LEU A 51 -165.48 -102.38 REMARK 500 4 ARG A 55 149.87 -172.97 REMARK 500 5 PRO A 33 95.74 -67.14 REMARK 500 5 LEU A 51 -165.38 -101.91 REMARK 500 5 GLU A 130 98.85 -49.71 REMARK 500 6 GLU A 12 76.77 59.87 REMARK 500 6 GLN A 34 25.48 -143.02 REMARK 500 6 PHE A 119 147.70 -176.11 REMARK 500 6 ASP A 128 69.43 -102.17 REMARK 500 7 ASP A 77 68.34 -160.35 REMARK 500 7 VAL A 129 98.82 -64.16 REMARK 500 8 LEU A 51 -165.83 -119.62 REMARK 500 8 ASP A 128 77.26 -101.07 REMARK 500 9 GLN A 4 24.85 -78.04 REMARK 500 9 VAL A 8 -79.89 -93.73 REMARK 500 9 LYS A 14 140.21 -171.42 REMARK 500 9 PRO A 33 87.57 -64.46 REMARK 500 10 GLU A 16 94.69 -178.57 REMARK 500 10 LEU A 51 -164.40 -116.24 REMARK 500 10 GLN A 52 154.89 -48.30 REMARK 500 10 ASP A 77 83.74 -155.71 REMARK 500 11 PRO A 33 30.55 -70.56 REMARK 500 11 LEU A 51 -165.77 -104.40 REMARK 500 11 ARG A 55 166.09 177.35 REMARK 500 12 ARG A 10 78.93 -118.83 REMARK 500 12 LEU A 15 77.34 -117.09 REMARK 500 12 ASN A 60 -32.71 -131.36 REMARK 500 13 GLN A 9 104.13 -174.73 REMARK 500 13 ARG A 10 -159.74 -139.58 REMARK 500 13 LEU A 51 -166.34 -118.12 REMARK 500 14 ARG A 55 147.90 -171.59 REMARK 500 15 SER A 30 -74.44 -69.46 REMARK 500 15 LEU A 51 -165.97 -104.24 REMARK 500 15 THR A 116 124.64 -35.83 REMARK 500 16 LEU A 51 -163.92 -118.67 REMARK 500 16 ASP A 128 42.58 -97.23 REMARK 500 17 SER A 3 73.99 62.08 REMARK 500 17 GLU A 12 -166.00 -117.93 REMARK 500 18 LYS A 5 -162.19 -114.10 REMARK 500 19 GLN A 4 -0.74 61.81 REMARK 500 19 LEU A 51 -165.59 -127.02 REMARK 500 20 THR A 18 107.26 -56.30 REMARK 500 22 LEU A 7 72.32 61.56 REMARK 500 22 LEU A 51 -165.41 -103.08 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 5 ARG A 13 0.08 SIDE CHAIN REMARK 500 8 ARG A 13 0.08 SIDE CHAIN REMARK 500 8 ARG A 42 0.09 SIDE CHAIN REMARK 500 11 ARG A 55 0.08 SIDE CHAIN REMARK 500 11 ARG A 107 0.07 SIDE CHAIN REMARK 500 24 ARG A 107 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17585 RELATED DB: BMRB REMARK 900 RELATED ID: 2LC1 RELATED DB: PDB DBREF 2LC0 A 1 132 UNP P71590 P71590_MYCTU 1 132 SEQRES 1 A 132 MET GLY SER GLN LYS ARG LEU VAL GLN ARG VAL GLU ARG SEQRES 2 A 132 LYS LEU GLU GLN THR VAL GLY ASP ALA PHE ALA ARG ILE SEQRES 3 A 132 PHE GLY GLY SER ILE VAL PRO GLN GLU VAL GLU ALA LEU SEQRES 4 A 132 LEU ARG ARG GLU ALA ALA ASP GLY ILE GLN SER LEU GLN SEQRES 5 A 132 GLY ASN ARG LEU LEU ALA PRO ASN GLU TYR ILE ILE THR SEQRES 6 A 132 LEU GLY VAL HIS ASP PHE GLU LYS LEU GLY ALA ASP PRO SEQRES 7 A 132 GLU LEU LYS SER THR GLY PHE ALA ARG ASP LEU ALA ASP SEQRES 8 A 132 TYR ILE GLN GLU GLN GLY TRP GLN THR TYR GLY ASP VAL SEQRES 9 A 132 VAL VAL ARG PHE GLU GLN SER SER ASN LEU HIS THR GLY SEQRES 10 A 132 GLN PHE ARG ALA ARG GLY THR VAL ASN PRO ASP VAL GLU SEQRES 11 A 132 THR HIS HELIX 1 1 ASP A 21 GLY A 28 1 8 HELIX 2 2 PRO A 33 GLY A 47 1 15 HELIX 3 3 VAL A 68 GLY A 75 1 8 HELIX 4 4 PRO A 78 GLY A 97 1 20 SHEET 1 A 3 VAL A 105 SER A 111 0 SHEET 2 A 3 GLU A 61 GLY A 67 1 N TYR A 62 O ARG A 107 SHEET 3 A 3 PHE A 119 THR A 124 -1 O ARG A 120 N THR A 65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1