data_2LDC # _entry.id 2LDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LDC pdb_00002ldc 10.2210/pdb2ldc/pdb RCSB RCSB102257 ? ? BMRB 17658 ? 10.13018/BMR17658 WWPDB D_1000102257 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-06-14 4 'Structure model' 2 0 2023-11-15 5 'Structure model' 2 1 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' Other 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' struct_conn 4 4 'Structure model' atom_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_struct_conn.pdbx_dist_value' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_atom_site.auth_atom_id' 17 4 'Structure model' '_atom_site.label_atom_id' 18 5 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LDC _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-20 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 17658 BMRB unspecified . 2LDA PDB unspecified . 2LDD PDB unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Phillips, C.' 1 'Bazin, R.' 2 'Bent, A.' 3 'Davies, N.' 4 'Moore, R.' 5 'Pannifer, A.' 6 'Pickford, A.' 7 'Prior, S.' 8 'Read, C.' 9 'Roberts, L.' 10 'Schade, M.' 11 'Scott, A.' 12 'Brown, D.' 13 'Xu, B.' 14 'Irving, S.' 15 # _citation.id primary _citation.title 'Design and structure of stapled peptides binding to estrogen receptors.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 133 _citation.page_first 9696 _citation.page_last 9699 _citation.year 2011 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21612236 _citation.pdbx_database_id_DOI 10.1021/ja202946k # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Phillips, C.' 1 ? primary 'Roberts, L.R.' 2 ? primary 'Schade, M.' 3 ? primary 'Bazin, R.' 4 ? primary 'Bent, A.' 5 ? primary 'Davies, N.L.' 6 ? primary 'Moore, R.' 7 ? primary 'Pannifer, A.D.' 8 ? primary 'Pickford, A.R.' 9 ? primary 'Prior, S.H.' 10 ? primary 'Read, C.M.' 11 ? primary 'Scott, A.' 12 ? primary 'Brown, D.G.' 13 ? primary 'Xu, B.' 14 ? primary 'Irving, S.L.' 15 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Estrogen receptor-binding stapled peptide SP1' _entity.formula_weight 1355.648 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)H(MK8)ILH(MK8)LLQDS(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XHLILHLLLQDSX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 HIS n 1 3 MK8 n 1 4 ILE n 1 5 LEU n 1 6 HIS n 1 7 MK8 n 1 8 LEU n 1 9 LEU n 1 10 GLN n 1 11 ASP n 1 12 SER n 1 13 NH2 n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MK8 'L-peptide linking' n 2-methyl-L-norleucine ? 'C7 H15 N O2' 145.199 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 HIS 2 1 1 HIS HIS A . n A 1 3 MK8 3 2 2 MK8 MK8 A . n A 1 4 ILE 4 3 3 ILE ILE A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 HIS 6 5 5 HIS HIS A . n A 1 7 MK8 7 6 6 MK8 MK8 A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 GLN 10 9 9 GLN GLN A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 SER 12 11 11 SER SER A . n A 1 13 NH2 13 12 12 NH2 NH2 A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LDC _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LDC _struct.title 'Solution structure of the estrogen receptor-binding stapled peptide SP1 (Ac-HXILHXLLQDS-NH2)' _struct.pdbx_model_details 'closest to the average, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LDC _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2LDC _struct_ref.pdbx_db_accession 2LDC _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LDC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2LDC _struct_ref_seq.db_align_beg 0 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 12 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id HIS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 2 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 10 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id HIS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 1 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 9 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A HIS 2 N ? ? A ACE 0 A HIS 1 1_555 ? ? ? ? ? ? ? 1.379 ? ? covale2 covale both ? A HIS 2 C ? ? ? 1_555 A MK8 3 N ? ? A HIS 1 A MK8 2 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale3 covale both ? A MK8 3 C ? ? ? 1_555 A ILE 4 N ? ? A MK8 2 A ILE 3 1_555 ? ? ? ? ? ? ? 1.381 ? ? covale4 covale none ? A MK8 3 CE ? ? ? 1_555 A MK8 7 CE ? ? A MK8 2 A MK8 6 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale5 covale both ? A HIS 6 C ? ? ? 1_555 A MK8 7 N ? ? A HIS 5 A MK8 6 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale6 covale both ? A MK8 7 C ? ? ? 1_555 A LEU 8 N ? ? A MK8 6 A LEU 7 1_555 ? ? ? ? ? ? ? 1.383 ? ? covale7 covale both ? A SER 12 C ? ? ? 1_555 A NH2 13 N ? ? A SER 11 A NH2 12 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MK8 A 3 ? . . . . MK8 A 2 ? 1_555 . . . . . . . LEU 1 MK8 Norleucine 'Named protein modification' 2 MK8 A 3 ? . . . . MK8 A 2 ? 1_555 . . . . . . . LEU 2 MK8 Methylation 'Named protein modification' 3 MK8 A 7 ? . . . . MK8 A 6 ? 1_555 . . . . . . . LEU 1 MK8 Norleucine 'Named protein modification' 4 MK8 A 7 ? . . . . MK8 A 6 ? 1_555 . . . . . . . LEU 2 MK8 Methylation 'Named protein modification' 5 ACE A 1 ? HIS A 2 ? ACE A 0 ? 1_555 HIS A 1 ? 1_555 . . HIS 19 ACE None 'Terminal acetylation' 6 NH2 A 13 ? SER A 12 ? NH2 A 12 ? 1_555 SER A 11 ? 1_555 . . SER 6 NH2 None 'Terminal amidation' 7 MK8 A 3 ? MK8 A 7 ? MK8 A 2 ? 1_555 MK8 A 6 ? 1_555 CE CE . . . None 'Non-standard linkage' # _pdbx_entry_details.entry_id 2LDC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 4 _pdbx_validate_torsion.auth_comp_id MK8 _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 6 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -55.44 _pdbx_validate_torsion.psi -7.33 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MK8 3 A MK8 2 ? LEU 2-METHYL-L-NORLEUCINE 2 A MK8 7 A MK8 6 ? LEU 2-METHYL-L-NORLEUCINE # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LDC _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LDC _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '5 mM stapled peptide SP1, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '5 mM stapled peptide SP1, 100% D2O' 2 '100% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'stapled peptide SP1-1' 5 ? mM ? 1 'stapled peptide SP1-2' 5 ? mM ? 2 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H COSY' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-1H NOESY' 1 4 2 '2D 1H-1H COSY' 1 5 2 '2D 1H-1H TOCSY' 1 6 2 '2D 1H-1H NOESY' # _pdbx_nmr_refine.entry_id 2LDC _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMR ? 1 'Andy Pickford' 'structure solution' NMRSwarm 0.1 2 'Andy Pickford' 'data analysis' NMRSwarm 0.1 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 4 CCPN 'chemical shift assignment' Analysis ? 5 ? refinement NMRSwarm ? 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ASP N N N N 8 ASP CA C N S 9 ASP C C N N 10 ASP O O N N 11 ASP CB C N N 12 ASP CG C N N 13 ASP OD1 O N N 14 ASP OD2 O N N 15 ASP OXT O N N 16 ASP H H N N 17 ASP H2 H N N 18 ASP HA H N N 19 ASP HB2 H N N 20 ASP HB3 H N N 21 ASP HD2 H N N 22 ASP HXT H N N 23 GLN N N N N 24 GLN CA C N S 25 GLN C C N N 26 GLN O O N N 27 GLN CB C N N 28 GLN CG C N N 29 GLN CD C N N 30 GLN OE1 O N N 31 GLN NE2 N N N 32 GLN OXT O N N 33 GLN H H N N 34 GLN H2 H N N 35 GLN HA H N N 36 GLN HB2 H N N 37 GLN HB3 H N N 38 GLN HG2 H N N 39 GLN HG3 H N N 40 GLN HE21 H N N 41 GLN HE22 H N N 42 GLN HXT H N N 43 HIS N N N N 44 HIS CA C N S 45 HIS C C N N 46 HIS O O N N 47 HIS CB C N N 48 HIS CG C Y N 49 HIS ND1 N Y N 50 HIS CD2 C Y N 51 HIS CE1 C Y N 52 HIS NE2 N Y N 53 HIS OXT O N N 54 HIS H H N N 55 HIS H2 H N N 56 HIS HA H N N 57 HIS HB2 H N N 58 HIS HB3 H N N 59 HIS HD1 H N N 60 HIS HD2 H N N 61 HIS HE1 H N N 62 HIS HE2 H N N 63 HIS HXT H N N 64 ILE N N N N 65 ILE CA C N S 66 ILE C C N N 67 ILE O O N N 68 ILE CB C N S 69 ILE CG1 C N N 70 ILE CG2 C N N 71 ILE CD1 C N N 72 ILE OXT O N N 73 ILE H H N N 74 ILE H2 H N N 75 ILE HA H N N 76 ILE HB H N N 77 ILE HG12 H N N 78 ILE HG13 H N N 79 ILE HG21 H N N 80 ILE HG22 H N N 81 ILE HG23 H N N 82 ILE HD11 H N N 83 ILE HD12 H N N 84 ILE HD13 H N N 85 ILE HXT H N N 86 LEU N N N N 87 LEU CA C N S 88 LEU C C N N 89 LEU O O N N 90 LEU CB C N N 91 LEU CG C N N 92 LEU CD1 C N N 93 LEU CD2 C N N 94 LEU OXT O N N 95 LEU H H N N 96 LEU H2 H N N 97 LEU HA H N N 98 LEU HB2 H N N 99 LEU HB3 H N N 100 LEU HG H N N 101 LEU HD11 H N N 102 LEU HD12 H N N 103 LEU HD13 H N N 104 LEU HD21 H N N 105 LEU HD22 H N N 106 LEU HD23 H N N 107 LEU HXT H N N 108 MK8 C C N N 109 MK8 N N N N 110 MK8 O O N N 111 MK8 CA C N S 112 MK8 CB C N N 113 MK8 CD C N N 114 MK8 CE C N N 115 MK8 CG C N N 116 MK8 CB1 C N N 117 MK8 OXT O N N 118 MK8 H H N N 119 MK8 H2 H N N 120 MK8 HB H N N 121 MK8 HBA H N N 122 MK8 HD H N N 123 MK8 HDA H N N 124 MK8 HE H N N 125 MK8 HEA H N N 126 MK8 HEB H N N 127 MK8 HG H N N 128 MK8 HGA H N N 129 MK8 HB1 H N N 130 MK8 HB1A H N N 131 MK8 HB1B H N N 132 MK8 HXT H N N 133 NH2 N N N N 134 NH2 HN1 H N N 135 NH2 HN2 H N N 136 SER N N N N 137 SER CA C N S 138 SER C C N N 139 SER O O N N 140 SER CB C N N 141 SER OG O N N 142 SER OXT O N N 143 SER H H N N 144 SER H2 H N N 145 SER HA H N N 146 SER HB2 H N N 147 SER HB3 H N N 148 SER HG H N N 149 SER HXT H N N 150 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ASP N CA sing N N 7 ASP N H sing N N 8 ASP N H2 sing N N 9 ASP CA C sing N N 10 ASP CA CB sing N N 11 ASP CA HA sing N N 12 ASP C O doub N N 13 ASP C OXT sing N N 14 ASP CB CG sing N N 15 ASP CB HB2 sing N N 16 ASP CB HB3 sing N N 17 ASP CG OD1 doub N N 18 ASP CG OD2 sing N N 19 ASP OD2 HD2 sing N N 20 ASP OXT HXT sing N N 21 GLN N CA sing N N 22 GLN N H sing N N 23 GLN N H2 sing N N 24 GLN CA C sing N N 25 GLN CA CB sing N N 26 GLN CA HA sing N N 27 GLN C O doub N N 28 GLN C OXT sing N N 29 GLN CB CG sing N N 30 GLN CB HB2 sing N N 31 GLN CB HB3 sing N N 32 GLN CG CD sing N N 33 GLN CG HG2 sing N N 34 GLN CG HG3 sing N N 35 GLN CD OE1 doub N N 36 GLN CD NE2 sing N N 37 GLN NE2 HE21 sing N N 38 GLN NE2 HE22 sing N N 39 GLN OXT HXT sing N N 40 HIS N CA sing N N 41 HIS N H sing N N 42 HIS N H2 sing N N 43 HIS CA C sing N N 44 HIS CA CB sing N N 45 HIS CA HA sing N N 46 HIS C O doub N N 47 HIS C OXT sing N N 48 HIS CB CG sing N N 49 HIS CB HB2 sing N N 50 HIS CB HB3 sing N N 51 HIS CG ND1 sing Y N 52 HIS CG CD2 doub Y N 53 HIS ND1 CE1 doub Y N 54 HIS ND1 HD1 sing N N 55 HIS CD2 NE2 sing Y N 56 HIS CD2 HD2 sing N N 57 HIS CE1 NE2 sing Y N 58 HIS CE1 HE1 sing N N 59 HIS NE2 HE2 sing N N 60 HIS OXT HXT sing N N 61 ILE N CA sing N N 62 ILE N H sing N N 63 ILE N H2 sing N N 64 ILE CA C sing N N 65 ILE CA CB sing N N 66 ILE CA HA sing N N 67 ILE C O doub N N 68 ILE C OXT sing N N 69 ILE CB CG1 sing N N 70 ILE CB CG2 sing N N 71 ILE CB HB sing N N 72 ILE CG1 CD1 sing N N 73 ILE CG1 HG12 sing N N 74 ILE CG1 HG13 sing N N 75 ILE CG2 HG21 sing N N 76 ILE CG2 HG22 sing N N 77 ILE CG2 HG23 sing N N 78 ILE CD1 HD11 sing N N 79 ILE CD1 HD12 sing N N 80 ILE CD1 HD13 sing N N 81 ILE OXT HXT sing N N 82 LEU N CA sing N N 83 LEU N H sing N N 84 LEU N H2 sing N N 85 LEU CA C sing N N 86 LEU CA CB sing N N 87 LEU CA HA sing N N 88 LEU C O doub N N 89 LEU C OXT sing N N 90 LEU CB CG sing N N 91 LEU CB HB2 sing N N 92 LEU CB HB3 sing N N 93 LEU CG CD1 sing N N 94 LEU CG CD2 sing N N 95 LEU CG HG sing N N 96 LEU CD1 HD11 sing N N 97 LEU CD1 HD12 sing N N 98 LEU CD1 HD13 sing N N 99 LEU CD2 HD21 sing N N 100 LEU CD2 HD22 sing N N 101 LEU CD2 HD23 sing N N 102 LEU OXT HXT sing N N 103 MK8 C CA sing N N 104 MK8 C OXT sing N N 105 MK8 N H sing N N 106 MK8 N H2 sing N N 107 MK8 O C doub N N 108 MK8 CA N sing N N 109 MK8 CA CB sing N N 110 MK8 CB HB sing N N 111 MK8 CB HBA sing N N 112 MK8 CD CG sing N N 113 MK8 CD HD sing N N 114 MK8 CD HDA sing N N 115 MK8 CE CD sing N N 116 MK8 CE HE sing N N 117 MK8 CE HEA sing N N 118 MK8 CE HEB sing N N 119 MK8 CG CB sing N N 120 MK8 CG HG sing N N 121 MK8 CG HGA sing N N 122 MK8 CB1 CA sing N N 123 MK8 CB1 HB1 sing N N 124 MK8 CB1 HB1A sing N N 125 MK8 CB1 HB1B sing N N 126 MK8 OXT HXT sing N N 127 NH2 N HN1 sing N N 128 NH2 N HN2 sing N N 129 SER N CA sing N N 130 SER N H sing N N 131 SER N H2 sing N N 132 SER CA C sing N N 133 SER CA CB sing N N 134 SER CA HA sing N N 135 SER C O doub N N 136 SER C OXT sing N N 137 SER CB OG sing N N 138 SER CB HB2 sing N N 139 SER CB HB3 sing N N 140 SER OG HG sing N N 141 SER OXT HXT sing N N 142 # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _atom_sites.entry_id 2LDC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_